RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 LAMA2P24043 3122 aaKnown RBP9.46□□□□□ -0.89
NPC1-201ENST00000269228 UNC80Q8N2C7 3258 aa9.46□□□□□ -0.89
NPC1-201ENST00000269228 A8MTW9 85 aa9.46□□□□□ -0.9
NPC1-201ENST00000269228 WFDC13Q8IUB5 93 aa9.46□□□□□ -0.9
NPC1-201ENST00000269228 WDFY4Q6ZS81 3184 aa9.45□□□□□ -0.9
NPC1-201ENST00000269228 SERP2Q8N6R1 65 aa9.45□□□□□ -0.9
NPC1-201ENST00000269228 SNURFQ9Y675 71 aa9.44□□□□□ -0.9
NPC1-201ENST00000269228 CIRBP-AS1Q8TBR5 109 aa9.44□□□□□ -0.9
NPC1-201ENST00000269228 KRTAP10-11P60412 298 aa9.43□□□□□ -0.9
NPC1-201ENST00000269228 LINC00337Q8N6G1 96 aa9.43□□□□□ -0.9
NPC1-201ENST00000269228 KRTAP1-1Q07627 177 aa9.43□□□□□ -0.9
NPC1-201ENST00000269228 K7ERS5 55 aa9.43□□□□□ -0.9
NPC1-201ENST00000269228 IMUPQ9GZP8 106 aa9.43□□□□□ -0.9
NPC1-201ENST00000269228 C22orf24Q9Y442 160 aa9.43□□□□□ -0.9
NPC1-201ENST00000269228 PRYO14603 147 aa9.42□□□□□ -0.9
NPC1-201ENST00000269228 LINC00588Q9Y4M8 146 aa9.42□□□□□ -0.9
NPC1-201ENST00000269228 PRLHP81277 87 aa9.42□□□□□ -0.9
NPC1-201ENST00000269228 NDUFC1O43677 76 aa9.41□□□□□ -0.9
NPC1-201ENST00000269228 K7EIL1 84 aa9.41□□□□□ -0.9
NPC1-201ENST00000269228 CSNK1G2-AS1Q8NCQ2 148 aa9.41□□□□□ -0.9
NPC1-201ENST00000269228 C1orf195Q5TG92 126 aa9.41□□□□□ -0.9
NPC1-201ENST00000269228 C6orf48Q9UBA6 75 aa9.4□□□□□ -0.9
NPC1-201ENST00000269228 CFAP54Q96N23 3096 aa9.4□□□□□ -0.9
NPC1-201ENST00000269228 Q6Q795 121 aa9.4□□□□□ -0.9
NPC1-201ENST00000269228 Q9BRP9 147 aa9.4□□□□□ -0.9
NPC1-201ENST00000269228 DSPP15924 2871 aaKnown RBP9.4□□□□□ -0.91
NPC1-201ENST00000269228 TEP1Q99973 2627 aaKnown RBP9.4□□□□□ -0.91
NPC1-201ENST00000269228 NBDYA0A0U1RRE5 68 aa9.39□□□□□ -0.91
NPC1-201ENST00000269228 TRIOO75962 3097 aa9.39□□□□□ -0.91
NPC1-201ENST00000269228 IGLV5-45A0A087WSX0 123 aa9.38□□□□□ -0.91
NPC1-201ENST00000269228 AKAP13Q12802 2813 aa9.38□□□□□ -0.91
NPC1-201ENST00000269228 LINC00575Q6W349 94 aa9.37□□□□□ -0.91
NPC1-201ENST00000269228 CDIP1Q9H305 208 aa9.37□□□□□ -0.91
NPC1-201ENST00000269228 CASC2Q6XLA1 102 aa9.37□□□□□ -0.91
NPC1-201ENST00000269228 C19orf73Q9NVV2 129 aa9.36□□□□□ -0.91
NPC1-201ENST00000269228 A0A087WVE0 104 aa9.36□□□□□ -0.91
NPC1-201ENST00000269228 PRR15LQ9BU68 103 aa9.36□□□□□ -0.91
NPC1-201ENST00000269228 WWC2-AS2Q96NR7 200 aa9.36□□□□□ -0.91
NPC1-201ENST00000269228 XIRP2A4UGR9 3374 aa9.36□□□□□ -0.91
NPC1-201ENST00000269228 LINC00167Q96N53 147 aa9.35□□□□□ -0.91
NPC1-201ENST00000269228 SMCR5Q8TEV8 140 aa9.34□□□□□ -0.91
NPC1-201ENST00000269228 GIG44P09565 113 aaPredicted RBP9.34□□□□□ -0.91
NPC1-201ENST00000269228 Q6JHZ5 121 aa9.34□□□□□ -0.91
NPC1-201ENST00000269228 CDH23Q9H251 3354 aa9.33□□□□□ -0.92
NPC1-201ENST00000269228 A0A087WSZ3 146 aa9.32□□□□□ -0.92
NPC1-201ENST00000269228 FAM19A3Q7Z5A8 133 aa9.32□□□□□ -0.92
NPC1-201ENST00000269228 PRR4Q16378 134 aa9.31□□□□□ -0.92
NPC1-201ENST00000269228 SOSTDC1Q6X4U4 206 aa9.31□□□□□ -0.92
NPC1-201ENST00000269228 DNAH10OSP0CZ25 163 aa9.3□□□□□ -0.92
NPC1-201ENST00000269228 RTL8CO15255 209 aa9.29□□□□□ -0.92
NPC1-201ENST00000269228 SMIM26A0A096LP01 95 aa9.28□□□□□ -0.92
NPC1-201ENST00000269228 IGHV6-1A0A0B4J1U7 121 aa9.28□□□□□ -0.92
NPC1-201ENST00000269228 FAM30AQ9NZY2 134 aa9.27□□□□□ -0.92
NPC1-201ENST00000269228 DEFB116Q30KQ4 102 aa9.27□□□□□ -0.93
NPC1-201ENST00000269228 PHF5AQ7RTV0 110 aaKnown RBP9.27□□□□□ -0.93
NPC1-201ENST00000269228 IGSF10Q6WRI0 2623 aa9.27□□□□□ -0.93
NPC1-201ENST00000269228 SPATA3Q8NHX4 192 aa9.26□□□□□ -0.93
NPC1-201ENST00000269228 SETXQ7Z333 2677 aaKnown RBP9.26□□□□□ -0.93
NPC1-201ENST00000269228 GVQW2A0A096LPI5 108 aaPredicted RBP9.26□□□□□ -0.93
NPC1-201ENST00000269228 KIAA0087Q14695 138 aa9.25□□□□□ -0.93
NPC1-201ENST00000269228 MAP1AP78559 2803 aaPredicted RBP9.25□□□□□ -0.93
NPC1-201ENST00000269228 CHTF8P0CG12 524 aa9.25□□□□□ -0.93
NPC1-201ENST00000269228 A6NED7 52 aa9.24□□□□□ -0.93
NPC1-201ENST00000269228 SMCPP49901 116 aaPredicted RBP9.24□□□□□ -0.93
NPC1-201ENST00000269228 C16orf90A8MZG2 172 aa9.23□□□□□ -0.93
NPC1-201ENST00000269228 SERP1Q9Y6X1 66 aa9.22□□□□□ -0.93
NPC1-201ENST00000269228 TEX15Q9BXT5 2789 aa9.22□□□□□ -0.93
NPC1-201ENST00000269228 LINC01547P58512 204 aaPredicted RBP9.21□□□□□ -0.93
NPC1-201ENST00000269228 Q6ZRP5 223 aa9.21□□□□□ -0.93
NPC1-201ENST00000269228 TM2D3Q9BRN9 247 aa9.21□□□□□ -0.94
NPC1-201ENST00000269228 VPS13AQ96RL7 3174 aa9.21□□□□□ -0.94
NPC1-201ENST00000269228 LINC00612Q8N6U2 182 aa9.2□□□□□ -0.94
NPC1-201ENST00000269228 Q6ZVQ6 151 aa9.2□□□□□ -0.94
NPC1-201ENST00000269228 LINC00846Q9NV44 126 aa9.2□□□□□ -0.94
NPC1-201ENST00000269228 FAM218AQ96MZ4 157 aa9.19□□□□□ -0.94
NPC1-201ENST00000269228 UNC79Q9P2D8 2635 aa9.19□□□□□ -0.94
NPC1-201ENST00000269228 Q8N9L7 120 aa9.19□□□□□ -0.94
NPC1-201ENST00000269228 PRO0461Q9UI25 63 aa9.19□□□□□ -0.94
NPC1-201ENST00000269228 MOBPQ13875 183 aa9.19□□□□□ -0.94
NPC1-201ENST00000269228 ELOF1P60002 83 aaKnown RBP9.18□□□□□ -0.94
NPC1-201ENST00000269228 STAB1Q9NY15 2570 aa9.18□□□□□ -0.94
NPC1-201ENST00000269228 RETNLBQ9BQ08 111 aa9.18□□□□□ -0.94
NPC1-201ENST00000269228 COL6A5A8TX70 2615 aa9.17□□□□□ -0.94
NPC1-201ENST00000269228 Q6ZRX8 168 aa9.17□□□□□ -0.94
NPC1-201ENST00000269228 LINC00208Q96KT6 92 aa9.17□□□□□ -0.94
NPC1-201ENST00000269228 TRAV7A0A075B6U4 112 aa9.17□□□□□ -0.94
NPC1-201ENST00000269228 EPM2AB3EWF7 344 aa9.17□□□□□ -0.94
NPC1-201ENST00000269228 LIMD2Q9BT23 127 aa9.16□□□□□ -0.94
NPC1-201ENST00000269228 CR1P17927 2039 aa9.16□□□□□ -0.94
NPC1-201ENST00000269228 FAM168BA1KXE4 195 aa9.16□□□□□ -0.94
NPC1-201ENST00000269228 VPREB1P12018 145 aa9.16□□□□□ -0.94
NPC1-201ENST00000269228 C4orf26Q17RF5 130 aa9.16□□□□□ -0.94
NPC1-201ENST00000269228 CHD6Q8TD26 2715 aa9.16□□□□□ -0.94
NPC1-201ENST00000269228 PMAIP1Q13794 54 aa9.16□□□□□ -0.94
NPC1-201ENST00000269228 PRR34Q9NV39 138 aa9.16□□□□□ -0.94
NPC1-201ENST00000269228 SZT2Q5T011 3432 aa9.16□□□□□ -0.94
NPC1-201ENST00000269228 TRBV7-6A0A0J9YX20 115 aa9.15□□□□□ -0.94
NPC1-201ENST00000269228 LITAFQ99732 161 aa9.15□□□□□ -0.94
NPC1-201ENST00000269228 FAM229AH3BQW9 127 aa9.15□□□□□ -0.95
NPC1-201ENST00000269228 TRBV7-7A0A0K0K1E9 115 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms