RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 ORMDL1Q9P0S3 153 aa11.07□□□□□ -0.64
MAP1LC3B-201ENST00000268607 TRBV10-1A0A0K0K1A3 114 aa11.06□□□□□ -0.64
MAP1LC3B-201ENST00000268607 LYPD5Q6UWN5 251 aa11.06□□□□□ -0.64
MAP1LC3B-201ENST00000268607 FP248Q71RG6 208 aaPredicted RBP11.06□□□□□ -0.64
MAP1LC3B-201ENST00000268607 TENM3Q9P273 2699 aa11.05□□□□□ -0.64
MAP1LC3B-201ENST00000268607 CMC4P56277 68 aaPredicted RBP11.05□□□□□ -0.64
MAP1LC3B-201ENST00000268607 S100A7L2Q5SY68 101 aa11.05□□□□□ -0.64
MAP1LC3B-201ENST00000268607 C16orf74Q96GX8 76 aa11.05□□□□□ -0.64
MAP1LC3B-201ENST00000268607 C11orf68Q9H3H3 251 aaKnown RBP11.04□□□□□ -0.64
MAP1LC3B-201ENST00000268607 DEFB130BP0DP73 79 aa11.04□□□□□ -0.64
MAP1LC3B-201ENST00000268607 DEFB130AP0DP74 79 aa11.04□□□□□ -0.64
MAP1LC3B-201ENST00000268607 F8WDY8 70 aa11.03□□□□□ -0.64
MAP1LC3B-201ENST00000268607 PRB2P02812 416 aaPredicted RBP11.03□□□□□ -0.64
MAP1LC3B-201ENST00000268607 SNURFQ9Y675 71 aa11.03□□□□□ -0.64
MAP1LC3B-201ENST00000268607 TRGV4A0A0C4DH28 118 aa11.03□□□□□ -0.64
MAP1LC3B-201ENST00000268607 ATP5EP2Q5VTU8 51 aa11.03□□□□□ -0.64
MAP1LC3B-201ENST00000268607 IBA57-AS1B1ANH7 110 aa11.02□□□□□ -0.64
MAP1LC3B-201ENST00000268607 IGLV4-60A0A075B6I1 120 aa11.02□□□□□ -0.65
MAP1LC3B-201ENST00000268607 TRBV6-4A0A1B0GX49 114 aa11.02□□□□□ -0.65
MAP1LC3B-201ENST00000268607 C9orf66Q5T8R8 295 aa11.01□□□□□ -0.65
MAP1LC3B-201ENST00000268607 MDFIQ99750 246 aa11.01□□□□□ -0.65
MAP1LC3B-201ENST00000268607 LINC00474Q9P2X8 69 aa11.01□□□□□ -0.65
MAP1LC3B-201ENST00000268607 IGHV3OR16-9A0A0B4J2B5 98 aa11.01□□□□□ -0.65
MAP1LC3B-201ENST00000268607 RMI2Q96E14 147 aa11□□□□□ -0.65
MAP1LC3B-201ENST00000268607 SMIM26A0A096LP01 95 aa11□□□□□ -0.65
MAP1LC3B-201ENST00000268607 DEFB4AO15263 64 aa11□□□□□ -0.65
MAP1LC3B-201ENST00000268607 UBL5Q9BZL1 73 aa10.99□□□□□ -0.65
MAP1LC3B-201ENST00000268607 PRR3P79522 188 aaKnown RBP10.99□□□□□ -0.65
MAP1LC3B-201ENST00000268607 TRAV7A0A075B6U4 112 aa10.98□□□□□ -0.65
MAP1LC3B-201ENST00000268607 A0A0U1RQV1 116 aa10.98□□□□□ -0.65
MAP1LC3B-201ENST00000268607 F8WEM9 126 aa10.98□□□□□ -0.65
MAP1LC3B-201ENST00000268607 JMJD7-PLA2G4BH0Y9G9 81 aa10.98□□□□□ -0.65
MAP1LC3B-201ENST00000268607 KRTAP10-11P60412 298 aa10.98□□□□□ -0.65
MAP1LC3B-201ENST00000268607 BRK1Q8WUW1 75 aa10.97□□□□□ -0.65
MAP1LC3B-201ENST00000268607 KLKP1Q107X0 134 aa10.97□□□□□ -0.65
MAP1LC3B-201ENST00000268607 C6orf226Q5I0X4 101 aa10.97□□□□□ -0.65
MAP1LC3B-201ENST00000268607 A0A087WZ39 114 aa10.96□□□□□ -0.65
MAP1LC3B-201ENST00000268607 TRAV10A0A0B4J240 114 aa10.96□□□□□ -0.65
MAP1LC3B-201ENST00000268607 TRBV10-3A0A0K0K1G6 114 aa10.96□□□□□ -0.65
MAP1LC3B-201ENST00000268607 Q8N814 137 aa10.96□□□□□ -0.65
MAP1LC3B-201ENST00000268607 DEFB135Q30KP9 77 aa10.95□□□□□ -0.66
MAP1LC3B-201ENST00000268607 RBM3P98179 157 aaKnown RBP10.95□□□□□ -0.66
MAP1LC3B-201ENST00000268607 LINC00167Q96N53 147 aa10.95□□□□□ -0.66
MAP1LC3B-201ENST00000268607 A0A096LPF7 62 aa10.94□□□□□ -0.66
MAP1LC3B-201ENST00000268607 NANOS2P60321 138 aaKnown RBP10.94□□□□□ -0.66
MAP1LC3B-201ENST00000268607 DNHD1Q96M86 4753 aa10.94□□□□□ -0.66
MAP1LC3B-201ENST00000268607 TMEM256-PLSCR3K7ERE1 68 aa10.94□□□□□ -0.66
MAP1LC3B-201ENST00000268607 TRBV7-6A0A0J9YX20 115 aa10.93□□□□□ -0.66
MAP1LC3B-201ENST00000268607 X6R8D5 127 aa10.92□□□□□ -0.66
MAP1LC3B-201ENST00000268607 IGHV4-30-4P0DP06 118 aa10.92□□□□□ -0.66
MAP1LC3B-201ENST00000268607 TRBV6-8A0A0A6YYG3 113 aa10.91□□□□□ -0.66
MAP1LC3B-201ENST00000268607 HAMPP81172 84 aa10.91□□□□□ -0.66
MAP1LC3B-201ENST00000268607 SEC61GP60059 68 aa10.91□□□□□ -0.66
MAP1LC3B-201ENST00000268607 LINC00959A0A1B0GUT2 108 aa10.9□□□□□ -0.66
MAP1LC3B-201ENST00000268607 GYPEP15421 78 aa10.9□□□□□ -0.67
MAP1LC3B-201ENST00000268607 LINC01547P58512 204 aaPredicted RBP10.9□□□□□ -0.67
MAP1LC3B-201ENST00000268607 C1orf195Q5TG92 126 aa10.9□□□□□ -0.67
MAP1LC3B-201ENST00000268607 COL7A1Q02388 2944 aa10.89□□□□□ -0.67
MAP1LC3B-201ENST00000268607 M0R2N4 97 aa10.89□□□□□ -0.67
MAP1LC3B-201ENST00000268607 V9GYY9 64 aa10.89□□□□□ -0.67
MAP1LC3B-201ENST00000268607 RETNQ9HD89 108 aa10.88□□□□□ -0.67
MAP1LC3B-201ENST00000268607 BCE1O60756 84 aa10.87□□□□□ -0.67
MAP1LC3B-201ENST00000268607 CLPSL2Q6UWE3 100 aa10.87□□□□□ -0.67
MAP1LC3B-201ENST00000268607 C6orf99Q4VX62 202 aa10.86□□□□□ -0.67
MAP1LC3B-201ENST00000268607 MPLKIPQ8TAP9 179 aa10.86□□□□□ -0.67
MAP1LC3B-201ENST00000268607 TM2D3Q9BRN9 247 aa10.86□□□□□ -0.67
MAP1LC3B-201ENST00000268607 Q6ZQT0 140 aa10.85□□□□□ -0.67
MAP1LC3B-201ENST00000268607 FAM229BQ4G0N7 80 aa10.84□□□□□ -0.67
MAP1LC3B-201ENST00000268607 Q6ZVQ6 151 aa10.84□□□□□ -0.67
MAP1LC3B-201ENST00000268607 Q8N3U1 123 aa10.84□□□□□ -0.67
MAP1LC3B-201ENST00000268607 Q8IZM0 81 aa10.83□□□□□ -0.68
MAP1LC3B-201ENST00000268607 LINC00612Q8N6U2 182 aa10.83□□□□□ -0.68
MAP1LC3B-201ENST00000268607 IGHV4-28A0A0C4DH34 117 aa10.82□□□□□ -0.68
MAP1LC3B-201ENST00000268607 C9orf116Q5BN46 136 aaPredicted RBP10.82□□□□□ -0.68
MAP1LC3B-201ENST00000268607 LAMTOR3Q9UHA4 124 aa10.82□□□□□ -0.68
MAP1LC3B-201ENST00000268607 Q8NDZ9 215 aa10.82□□□□□ -0.68
MAP1LC3B-201ENST00000268607 PRO0255Q9UI72 69 aa10.81□□□□□ -0.68
MAP1LC3B-201ENST00000268607 CELA1Q9UNI1 258 aa10.81□□□□□ -0.68
MAP1LC3B-201ENST00000268607 DNAH3Q8TD57 4116 aa10.81□□□□□ -0.68
MAP1LC3B-201ENST00000268607 STAB2Q8WWQ8 2551 aa10.81□□□□□ -0.68
MAP1LC3B-201ENST00000268607 MIFP14174 115 aa10.81□□□□□ -0.68
MAP1LC3B-201ENST00000268607 HTN3P15516 51 aa10.81□□□□□ -0.68
MAP1LC3B-201ENST00000268607 LINC00575Q6W349 94 aa10.81□□□□□ -0.68
MAP1LC3B-201ENST00000268607 TRBV7-4A0A0J9YYF1 115 aa10.8□□□□□ -0.68
MAP1LC3B-201ENST00000268607 SCXQ7RTU7 201 aa10.8□□□□□ -0.68
MAP1LC3B-201ENST00000268607 NDUFC1O43677 76 aa10.8□□□□□ -0.68
MAP1LC3B-201ENST00000268607 APOC4P55056 127 aa10.79□□□□□ -0.68
MAP1LC3B-201ENST00000268607 DAD1P61803 113 aa10.78□□□□□ -0.68
MAP1LC3B-201ENST00000268607 ZNF561-AS1K7EIQ3 104 aa10.78□□□□□ -0.68
MAP1LC3B-201ENST00000268607 LOC110117498A0A087WWA1 95 aa10.77□□□□□ -0.69
MAP1LC3B-201ENST00000268607 LYRM9A8MSI8 78 aa10.76□□□□□ -0.69
MAP1LC3B-201ENST00000268607 KIAA0087Q14695 138 aa10.76□□□□□ -0.69
MAP1LC3B-201ENST00000268607 LINC00269Q8N2A0 174 aa10.76□□□□□ -0.69
MAP1LC3B-201ENST00000268607 ATP5EP56381 51 aaPredicted RBP10.75□□□□□ -0.69
MAP1LC3B-201ENST00000268607 CXCL6P80162 114 aa10.75□□□□□ -0.69
MAP1LC3B-201ENST00000268607 EGFEM1PQ0D2K5 195 aa10.75□□□□□ -0.69
MAP1LC3B-201ENST00000268607 C6orf223Q8N319 242 aa10.75□□□□□ -0.69
MAP1LC3B-201ENST00000268607 TMEM254Q8TBM7 123 aa10.75□□□□□ -0.69
MAP1LC3B-201ENST00000268607 TENM2Q9NT68 2774 aa10.75□□□□□ -0.69
MAP1LC3B-201ENST00000268607 IGLV10-54A0A075B6I4 117 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms