RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 IGLV5-45A0A087WSX0 123 aa10.67□□□□□ -0.7
TIMP3-201ENST00000266085 C1orf134Q5TEV5 83 aa10.67□□□□□ -0.7
TIMP3-201ENST00000266085 FAM236DA0A1B0GTK5 79 aa10.67□□□□□ -0.7
TIMP3-201ENST00000266085 FAM236CP0DP71 79 aa10.67□□□□□ -0.7
TIMP3-201ENST00000266085 H3BNG1 76 aa10.66□□□□□ -0.7
TIMP3-201ENST00000266085 A8MTW9 85 aa10.66□□□□□ -0.7
TIMP3-201ENST00000266085 Q8NAQ8 132 aa10.65□□□□□ -0.7
TIMP3-201ENST00000266085 PRYO14603 147 aa10.65□□□□□ -0.7
TIMP3-201ENST00000266085 LINC00575Q6W349 94 aa10.65□□□□□ -0.7
TIMP3-201ENST00000266085 CASC2Q6XLA1 102 aa10.65□□□□□ -0.71
TIMP3-201ENST00000266085 TEX15Q9BXT5 2789 aa10.64□□□□□ -0.71
TIMP3-201ENST00000266085 CDH23Q9H251 3354 aa10.64□□□□□ -0.71
TIMP3-201ENST00000266085 CHD6Q8TD26 2715 aa10.63□□□□□ -0.71
TIMP3-201ENST00000266085 COX7CP15954 63 aa10.62□□□□□ -0.71
TIMP3-201ENST00000266085 Q6Q795 121 aa10.62□□□□□ -0.71
TIMP3-201ENST00000266085 NDUFC1O43677 76 aa10.62□□□□□ -0.71
TIMP3-201ENST00000266085 MDFIQ99750 246 aa10.62□□□□□ -0.71
TIMP3-201ENST00000266085 SNURFQ9Y675 71 aa10.61□□□□□ -0.71
TIMP3-201ENST00000266085 Q8N3U1 123 aa10.61□□□□□ -0.71
TIMP3-201ENST00000266085 SEC61GP60059 68 aa10.6□□□□□ -0.71
TIMP3-201ENST00000266085 COL6A5A8TX70 2615 aa10.6□□□□□ -0.71
TIMP3-201ENST00000266085 C22orf24Q9Y442 160 aa10.59□□□□□ -0.71
TIMP3-201ENST00000266085 Q9BRP9 147 aa10.59□□□□□ -0.71
TIMP3-201ENST00000266085 KRTAP1-3Q8IUG1 177 aa10.59□□□□□ -0.71
TIMP3-201ENST00000266085 A0A087WVE0 104 aa10.58□□□□□ -0.72
TIMP3-201ENST00000266085 C6orf48Q9UBA6 75 aa10.58□□□□□ -0.72
TIMP3-201ENST00000266085 IGSF10Q6WRI0 2623 aa10.58□□□□□ -0.72
TIMP3-201ENST00000266085 PRLHP81277 87 aa10.57□□□□□ -0.72
TIMP3-201ENST00000266085 CIRBP-AS1Q8TBR5 109 aa10.57□□□□□ -0.72
TIMP3-201ENST00000266085 A0A087WSZ3 146 aa10.56□□□□□ -0.72
TIMP3-201ENST00000266085 UNC79Q9P2D8 2635 aa10.56□□□□□ -0.72
TIMP3-201ENST00000266085 SOSTDC1Q6X4U4 206 aa10.56□□□□□ -0.72
TIMP3-201ENST00000266085 CCDC179H3BU77 68 aa10.54□□□□□ -0.72
TIMP3-201ENST00000266085 CSNK1G2-AS1Q8NCQ2 148 aa10.54□□□□□ -0.72
TIMP3-201ENST00000266085 LINC00846Q9NV44 126 aa10.54□□□□□ -0.72
TIMP3-201ENST00000266085 FAM30AQ9NZY2 134 aa10.53□□□□□ -0.72
TIMP3-201ENST00000266085 Q8N9L7 120 aa10.53□□□□□ -0.72
TIMP3-201ENST00000266085 ATP5EP56381 51 aaPredicted RBP10.53□□□□□ -0.72
TIMP3-201ENST00000266085 PRR4Q16378 134 aa10.53□□□□□ -0.72
TIMP3-201ENST00000266085 MPLKIPQ8TAP9 179 aa10.53□□□□□ -0.72
TIMP3-201ENST00000266085 TRAV7A0A075B6U4 112 aa10.53□□□□□ -0.72
TIMP3-201ENST00000266085 KRTAP10-3P60369 221 aa10.52□□□□□ -0.72
TIMP3-201ENST00000266085 Q6ZVQ6 151 aa10.51□□□□□ -0.73
TIMP3-201ENST00000266085 LINC00588Q9Y4M8 146 aa10.51□□□□□ -0.73
TIMP3-201ENST00000266085 KRTAP1-1Q07627 177 aa10.51□□□□□ -0.73
TIMP3-201ENST00000266085 SMCR5Q8TEV8 140 aa10.51□□□□□ -0.73
TIMP3-201ENST00000266085 LINC00167Q96N53 147 aa10.51□□□□□ -0.73
TIMP3-201ENST00000266085 C19orf73Q9NVV2 129 aa10.51□□□□□ -0.73
TIMP3-201ENST00000266085 NOTCH1P46531 2555 aa10.5□□□□□ -0.73
TIMP3-201ENST00000266085 LINC01547P58512 204 aaPredicted RBP10.49□□□□□ -0.73
TIMP3-201ENST00000266085 GIG44P09565 113 aaPredicted RBP10.48□□□□□ -0.73
TIMP3-201ENST00000266085 BRK1Q8WUW1 75 aa10.48□□□□□ -0.73
TIMP3-201ENST00000266085 KRTAP10-11P60412 298 aa10.47□□□□□ -0.73
TIMP3-201ENST00000266085 LINC00208Q96KT6 92 aa10.47□□□□□ -0.73
TIMP3-201ENST00000266085 IGHV6-1A0A0B4J1U7 121 aa10.46□□□□□ -0.73
TIMP3-201ENST00000266085 K7EIL1 84 aa10.46□□□□□ -0.73
TIMP3-201ENST00000266085 KIAA0087Q14695 138 aa10.45□□□□□ -0.74
TIMP3-201ENST00000266085 SMCPP49901 116 aaPredicted RBP10.45□□□□□ -0.74
TIMP3-201ENST00000266085 NBDYA0A0U1RRE5 68 aa10.45□□□□□ -0.74
TIMP3-201ENST00000266085 FAM218AQ96MZ4 157 aa10.45□□□□□ -0.74
TIMP3-201ENST00000266085 DEFB116Q30KQ4 102 aa10.44□□□□□ -0.74
TIMP3-201ENST00000266085 SZT2Q5T011 3432 aa10.44□□□□□ -0.74
TIMP3-201ENST00000266085 TRBV7-6A0A0J9YX20 115 aa10.42□□□□□ -0.74
TIMP3-201ENST00000266085 CDIP1Q9H305 208 aa10.42□□□□□ -0.74
TIMP3-201ENST00000266085 PRO0461Q9UI25 63 aa10.42□□□□□ -0.74
TIMP3-201ENST00000266085 DNAH10OSP0CZ25 163 aa10.42□□□□□ -0.74
TIMP3-201ENST00000266085 V9GYY9 64 aa10.42□□□□□ -0.74
TIMP3-201ENST00000266085 UBR5O95071 2799 aaPredicted RBP10.42□□□□□ -0.74
TIMP3-201ENST00000266085 SPATA3Q8NHX4 192 aa10.42□□□□□ -0.74
TIMP3-201ENST00000266085 FLNCQ14315 2725 aa10.41□□□□□ -0.74
TIMP3-201ENST00000266085 GVQW2A0A096LPI5 108 aaPredicted RBP10.41□□□□□ -0.74
TIMP3-201ENST00000266085 ELOF1P60002 83 aaKnown RBP10.41□□□□□ -0.74
TIMP3-201ENST00000266085 LITAFQ99732 161 aa10.41□□□□□ -0.74
TIMP3-201ENST00000266085 GCN1Q92616 2671 aaKnown RBP10.41□□□□□ -0.74
TIMP3-201ENST00000266085 FRYQ5TBA9 3013 aa10.39□□□□□ -0.75
TIMP3-201ENST00000266085 SPTSSBQ8NFR3 76 aa10.39□□□□□ -0.75
TIMP3-201ENST00000266085 CXCL6P80162 114 aa10.38□□□□□ -0.75
TIMP3-201ENST00000266085 Q6ZRX8 168 aa10.37□□□□□ -0.75
TIMP3-201ENST00000266085 BAHCC1Q9P281 2608 aa10.37□□□□□ -0.75
TIMP3-201ENST00000266085 LAMA1P25391 3075 aa10.37□□□□□ -0.75
TIMP3-201ENST00000266085 TRBV7-7A0A0K0K1E9 115 aa10.37□□□□□ -0.75
TIMP3-201ENST00000266085 C16orf90A8MZG2 172 aa10.37□□□□□ -0.75
TIMP3-201ENST00000266085 FRYLO94915 3013 aa10.36□□□□□ -0.75
TIMP3-201ENST00000266085 WWC2-AS2Q96NR7 200 aa10.36□□□□□ -0.75
TIMP3-201ENST00000266085 HCG22E2RYF7 251 aa10.35□□□□□ -0.75
TIMP3-201ENST00000266085 Q6ZRP5 223 aa10.35□□□□□ -0.75
TIMP3-201ENST00000266085 PHF5AQ7RTV0 110 aaKnown RBP10.35□□□□□ -0.75
TIMP3-201ENST00000266085 PRR15LQ9BU68 103 aa10.35□□□□□ -0.75
TIMP3-201ENST00000266085 NBEAL1Q6ZS30 2694 aa10.34□□□□□ -0.75
TIMP3-201ENST00000266085 TMEM254Q8TBM7 123 aa10.34□□□□□ -0.75
TIMP3-201ENST00000266085 CHTF8P0CG12 524 aa10.33□□□□□ -0.76
TIMP3-201ENST00000266085 LINC00612Q8N6U2 182 aa10.33□□□□□ -0.76
TIMP3-201ENST00000266085 CELSR3Q9NYQ7 3312 aa10.33□□□□□ -0.76
TIMP3-201ENST00000266085 LIMD2Q9BT23 127 aa10.33□□□□□ -0.76
TIMP3-201ENST00000266085 RTL8CO15255 209 aa10.32□□□□□ -0.76
TIMP3-201ENST00000266085 VPREB1P12018 145 aa10.32□□□□□ -0.76
TIMP3-201ENST00000266085 PRR34Q9NV39 138 aa10.32□□□□□ -0.76
TIMP3-201ENST00000266085 SMIM26A0A096LP01 95 aa10.32□□□□□ -0.76
TIMP3-201ENST00000266085 A0A1B0GW54 56 aa10.32□□□□□ -0.76
TIMP3-201ENST00000266085 MOBPQ13875 183 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms