RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 C9orf66Q5T8R8 295 aa10.54□□□□□ -0.72
CASC3-201ENST00000264645 C2orf48Q96LS8 159 aa10.53□□□□□ -0.72
CASC3-201ENST00000264645 LINC00474Q9P2X8 69 aa10.52□□□□□ -0.72
CASC3-201ENST00000264645 RPL37AP8A6NKH3 93 aa10.52□□□□□ -0.73
CASC3-201ENST00000264645 SYCNQ0VAF6 134 aa10.51□□□□□ -0.73
CASC3-201ENST00000264645 Q6ZQT0 140 aa10.51□□□□□ -0.73
CASC3-201ENST00000264645 KLK9Q2XQG4 91 aa10.51□□□□□ -0.73
CASC3-201ENST00000264645 LINC00208Q96KT6 92 aa10.51□□□□□ -0.73
CASC3-201ENST00000264645 IGKV2-24A0A0C4DH68 120 aa10.5□□□□□ -0.73
CASC3-201ENST00000264645 RETNQ9HD89 108 aa10.49□□□□□ -0.73
CASC3-201ENST00000264645 A0A1B0GUV1 79 aa10.48□□□□□ -0.73
CASC3-201ENST00000264645 BCE1O60756 84 aa10.48□□□□□ -0.73
CASC3-201ENST00000264645 KALRNO60229 2985 aa10.48□□□□□ -0.73
CASC3-201ENST00000264645 C1orf137Q5JT78 98 aa10.48□□□□□ -0.73
CASC3-201ENST00000264645 LELP1Q5T871 98 aa10.48□□□□□ -0.73
CASC3-201ENST00000264645 LINC01600Q96MT4 127 aa10.47□□□□□ -0.73
CASC3-201ENST00000264645 AKAP13Q12802 2813 aa10.47□□□□□ -0.73
CASC3-201ENST00000264645 IGKV4-1P06312 121 aa10.45□□□□□ -0.74
CASC3-201ENST00000264645 PRR15LQ9BU68 103 aa10.45□□□□□ -0.74
CASC3-201ENST00000264645 H7BZZ5 65 aa10.44□□□□□ -0.74
CASC3-201ENST00000264645 UBE2AP49459 152 aa10.44□□□□□ -0.74
CASC3-201ENST00000264645 DHRS4-AS1Q9P1J3 65 aa10.44□□□□□ -0.74
CASC3-201ENST00000264645 SMIM29Q86T20 159 aa10.43□□□□□ -0.74
CASC3-201ENST00000264645 DEFB116Q30KQ4 102 aa10.43□□□□□ -0.74
CASC3-201ENST00000264645 C10orf25Q5T742 122 aa10.43□□□□□ -0.74
CASC3-201ENST00000264645 CYSTM1Q9H1C7 97 aa10.43□□□□□ -0.74
CASC3-201ENST00000264645 EGFEM1PQ0D2K5 195 aa10.41□□□□□ -0.74
CASC3-201ENST00000264645 LOC110117498A0A087WWA1 95 aa10.4□□□□□ -0.74
CASC3-201ENST00000264645 KLKP1Q107X0 134 aa10.4□□□□□ -0.74
CASC3-201ENST00000264645 IGLV1-51P01701 117 aa10.39□□□□□ -0.75
CASC3-201ENST00000264645 USP24Q9UPU5 2620 aa10.38□□□□□ -0.75
CASC3-201ENST00000264645 KPRPQ5T749 579 aaPredicted RBP10.38□□□□□ -0.75
CASC3-201ENST00000264645 FLNBO75369 2602 aaKnown RBP10.37□□□□□ -0.75
CASC3-201ENST00000264645 ADGRG4Q8IZF6 3080 aa10.36□□□□□ -0.75
CASC3-201ENST00000264645 BOD1L1Q8NFC6 3051 aa10.36□□□□□ -0.75
CASC3-201ENST00000264645 WIPF1O43516 503 aa10.35□□□□□ -0.75
CASC3-201ENST00000264645 TACC2O95359 2948 aa10.34□□□□□ -0.75
CASC3-201ENST00000264645 LY6G6DO95868 133 aa10.34□□□□□ -0.75
CASC3-201ENST00000264645 KIAA0087Q14695 138 aa10.34□□□□□ -0.75
CASC3-201ENST00000264645 Q6ZRU5 148 aa10.34□□□□□ -0.75
CASC3-201ENST00000264645 FAM104AQ969W3 186 aa10.34□□□□□ -0.75
CASC3-201ENST00000264645 CFAP47Q6ZTR5 3102 aa10.34□□□□□ -0.75
CASC3-201ENST00000264645 A0A087WSZ3 146 aa10.33□□□□□ -0.76
CASC3-201ENST00000264645 DEFB131BA0A096LNP1 70 aa10.33□□□□□ -0.76
CASC3-201ENST00000264645 CHD6Q8TD26 2715 aa10.33□□□□□ -0.76
CASC3-201ENST00000264645 PLAC8L1A1L4L8 177 aa10.32□□□□□ -0.76
CASC3-201ENST00000264645 C6orf48Q9UBA6 75 aa10.31□□□□□ -0.76
CASC3-201ENST00000264645 REV3LO60673 3130 aa10.31□□□□□ -0.76
CASC3-201ENST00000264645 HCG22E2RYF7 251 aa10.31□□□□□ -0.76
CASC3-201ENST00000264645 M0R2N4 97 aa10.3□□□□□ -0.76
CASC3-201ENST00000264645 PCOTHQ58A44 107 aa10.3□□□□□ -0.76
CASC3-201ENST00000264645 C11orf45Q8TAV5 145 aa10.3□□□□□ -0.76
CASC3-201ENST00000264645 KRTAP10-9P60411 292 aa10.3□□□□□ -0.76
CASC3-201ENST00000264645 B9D2Q9BPU9 175 aa10.29□□□□□ -0.76
CASC3-201ENST00000264645 H0Y9P7 68 aa10.29□□□□□ -0.76
CASC3-201ENST00000264645 CASC2Q6XLA1 102 aa10.28□□□□□ -0.76
CASC3-201ENST00000264645 ELOF1P60002 83 aaKnown RBP10.28□□□□□ -0.76
CASC3-201ENST00000264645 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.27□□□□□ -0.76
CASC3-201ENST00000264645 Q5XG85 94 aa10.27□□□□□ -0.76
CASC3-201ENST00000264645 MYO15AQ9UKN7 3530 aa10.27□□□□□ -0.77
CASC3-201ENST00000264645 OBSCN-AS1Q96MR7 158 aa10.26□□□□□ -0.77
CASC3-201ENST00000264645 A8MUN3 132 aa10.25□□□□□ -0.77
CASC3-201ENST00000264645 IGHV4-30-4P0DP06 118 aa10.24□□□□□ -0.77
CASC3-201ENST00000264645 OXTP01178 125 aa10.23□□□□□ -0.77
CASC3-201ENST00000264645 IGLV6-57P01721 117 aa10.23□□□□□ -0.77
CASC3-201ENST00000264645 hDV103S1A0JD37 113 aa10.22□□□□□ -0.77
CASC3-201ENST00000264645 LYPD5Q6UWN5 251 aa10.22□□□□□ -0.77
CASC3-201ENST00000264645 C7orf33Q8WU49 177 aa10.22□□□□□ -0.77
CASC3-201ENST00000264645 LIMD2Q9BT23 127 aa10.22□□□□□ -0.77
CASC3-201ENST00000264645 COL6A3P12111 3177 aa10.21□□□□□ -0.77
CASC3-201ENST00000264645 ERC2-IT1O76042 136 aa10.21□□□□□ -0.78
CASC3-201ENST00000264645 SPINK6Q6UWN8 80 aa10.2□□□□□ -0.78
CASC3-201ENST00000264645 C1orf64Q8NEQ6 169 aa10.2□□□□□ -0.78
CASC3-201ENST00000264645 DMXL2Q8TDJ6 3036 aa10.19□□□□□ -0.78
CASC3-201ENST00000264645 F8WDY8 70 aa10.19□□□□□ -0.78
CASC3-201ENST00000264645 GCN1Q92616 2671 aaKnown RBP10.18□□□□□ -0.78
CASC3-201ENST00000264645 Q8NBF4 154 aa10.18□□□□□ -0.78
CASC3-201ENST00000264645 IL17DQ8TAD2 202 aa10.18□□□□□ -0.78
CASC3-201ENST00000264645 REG3GQ6UW15 175 aa10.18□□□□□ -0.78
CASC3-201ENST00000264645 Q6ZTC4 211 aa10.18□□□□□ -0.78
CASC3-201ENST00000264645 TRBV7-4A0A0J9YYF1 115 aa10.17□□□□□ -0.78
CASC3-201ENST00000264645 PRLHP81277 87 aa10.17□□□□□ -0.78
CASC3-201ENST00000264645 C22orf24Q9Y442 160 aa10.17□□□□□ -0.78
CASC3-201ENST00000264645 IGLV9-49A0A0B4J1Y8 123 aa10.16□□□□□ -0.78
CASC3-201ENST00000264645 LINC00167Q96N53 147 aa10.16□□□□□ -0.78
CASC3-201ENST00000264645 ST20-AS1Q8NBB2 130 aa10.15□□□□□ -0.78
CASC3-201ENST00000264645 Q9BRP9 147 aa10.15□□□□□ -0.78
CASC3-201ENST00000264645 EYSQ5T1H1 3165 aa10.15□□□□□ -0.78
CASC3-201ENST00000264645 X6R8D5 127 aa10.15□□□□□ -0.78
CASC3-201ENST00000264645 A0A096LNT2 108 aa10.14□□□□□ -0.79
CASC3-201ENST00000264645 NBEAL2Q6ZNJ1 2754 aa10.14□□□□□ -0.79
CASC3-201ENST00000264645 K7EQZ3 153 aa10.14□□□□□ -0.79
CASC3-201ENST00000264645 VPREB1P12018 145 aa10.14□□□□□ -0.79
CASC3-201ENST00000264645 FP248Q71RG6 208 aaPredicted RBP10.14□□□□□ -0.79
CASC3-201ENST00000264645 FSHBP01225 129 aa10.14□□□□□ -0.79
CASC3-201ENST00000264645 FLNAP21333 2647 aaKnown RBP10.13□□□□□ -0.79
CASC3-201ENST00000264645 CR1P17927 2039 aa10.13□□□□□ -0.79
CASC3-201ENST00000264645 SPAG11AQ6PDA7 123 aa10.12□□□□□ -0.79
CASC3-201ENST00000264645 ZNF292O60281 2723 aa10.12□□□□□ -0.79
CASC3-201ENST00000264645 TRAV22A0A0B4J277 110 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms