RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 HRCT1Q6UXD1 115 aa11.44□□□□□ -0.58
PHRF1-201ENST00000264555 A0A0U1RQV1 116 aa11.44□□□□□ -0.58
PHRF1-201ENST00000264555 Q6ZVQ6 151 aa11.44□□□□□ -0.58
PHRF1-201ENST00000264555 C22orf24Q9Y442 160 aa11.44□□□□□ -0.58
PHRF1-201ENST00000264555 NHLRC4P0CG21 123 aaPredicted RBP11.43□□□□□ -0.58
PHRF1-201ENST00000264555 C19orf73Q9NVV2 129 aa11.41□□□□□ -0.58
PHRF1-201ENST00000264555 GIG44P09565 113 aaPredicted RBP11.41□□□□□ -0.58
PHRF1-201ENST00000264555 SPINK6Q6UWN8 80 aa11.41□□□□□ -0.58
PHRF1-201ENST00000264555 FAM30AQ9NZY2 134 aa11.41□□□□□ -0.58
PHRF1-201ENST00000264555 Q9BRP9 147 aa11.4□□□□□ -0.58
PHRF1-201ENST00000264555 A0A0C4DFX4 3053 aa11.4□□□□□ -0.58
PHRF1-201ENST00000264555 TRBV7-6A0A0J9YX20 115 aa11.4□□□□□ -0.58
PHRF1-201ENST00000264555 KRTAP1-3Q8IUG1 177 aa11.39□□□□□ -0.59
PHRF1-201ENST00000264555 PRR15LQ9BU68 103 aa11.39□□□□□ -0.59
PHRF1-201ENST00000264555 LINC01547P58512 204 aaPredicted RBP11.39□□□□□ -0.59
PHRF1-201ENST00000264555 IGLV5-52A0A0A0MRZ9 124 aa11.38□□□□□ -0.59
PHRF1-201ENST00000264555 UNC80Q8N2C7 3258 aa11.37□□□□□ -0.59
PHRF1-201ENST00000264555 GVQW2A0A096LPI5 108 aaPredicted RBP11.37□□□□□ -0.59
PHRF1-201ENST00000264555 ZNF575Q86XF7 245 aa11.36□□□□□ -0.59
PHRF1-201ENST00000264555 CXCL6P80162 114 aa11.36□□□□□ -0.59
PHRF1-201ENST00000264555 LAMA2P24043 3122 aaKnown RBP11.36□□□□□ -0.59
PHRF1-201ENST00000264555 SMIM26A0A096LP01 95 aa11.36□□□□□ -0.59
PHRF1-201ENST00000264555 ELOF1P60002 83 aaKnown RBP11.36□□□□□ -0.59
PHRF1-201ENST00000264555 SPATA3Q8NHX4 192 aa11.35□□□□□ -0.59
PHRF1-201ENST00000264555 LINC00167Q96N53 147 aa11.35□□□□□ -0.59
PHRF1-201ENST00000264555 CASC2Q6XLA1 102 aa11.35□□□□□ -0.59
PHRF1-201ENST00000264555 PRLHP81277 87 aa11.34□□□□□ -0.59
PHRF1-201ENST00000264555 C1orf195Q5TG92 126 aa11.34□□□□□ -0.59
PHRF1-201ENST00000264555 A0A087WSZ3 146 aa11.34□□□□□ -0.59
PHRF1-201ENST00000264555 SERP1Q9Y6X1 66 aa11.34□□□□□ -0.59
PHRF1-201ENST00000264555 KIAA0087Q14695 138 aa11.34□□□□□ -0.59
PHRF1-201ENST00000264555 KRTAP10-3P60369 221 aa11.33□□□□□ -0.6
PHRF1-201ENST00000264555 C1orf134Q5TEV5 83 aa11.33□□□□□ -0.6
PHRF1-201ENST00000264555 LINC00612Q8N6U2 182 aa11.33□□□□□ -0.6
PHRF1-201ENST00000264555 PRUNE2Q8WUY3 3088 aa11.33□□□□□ -0.6
PHRF1-201ENST00000264555 SMCR5Q8TEV8 140 aa11.32□□□□□ -0.6
PHRF1-201ENST00000264555 ZNF292O60281 2723 aa11.32□□□□□ -0.6
PHRF1-201ENST00000264555 LINC00588Q9Y4M8 146 aa11.31□□□□□ -0.6
PHRF1-201ENST00000264555 MDFIQ99750 246 aa11.31□□□□□ -0.6
PHRF1-201ENST00000264555 K7ERS5 55 aa11.3□□□□□ -0.6
PHRF1-201ENST00000264555 F8P00451 2351 aa11.3□□□□□ -0.6
PHRF1-201ENST00000264555 EIF4EBP3O60516 100 aaPredicted RBP11.29□□□□□ -0.6
PHRF1-201ENST00000264555 KRTAP1-1Q07627 177 aa11.28□□□□□ -0.6
PHRF1-201ENST00000264555 A6NED7 52 aa11.28□□□□□ -0.6
PHRF1-201ENST00000264555 DNAH10OSP0CZ25 163 aa11.28□□□□□ -0.6
PHRF1-201ENST00000264555 HECTD1Q9ULT8 2610 aa11.28□□□□□ -0.6
PHRF1-201ENST00000264555 LOC110117498A0A087WWA1 95 aa11.28□□□□□ -0.6
PHRF1-201ENST00000264555 PRR4Q16378 134 aa11.27□□□□□ -0.6
PHRF1-201ENST00000264555 CDH23Q9H251 3354 aa11.27□□□□□ -0.6
PHRF1-201ENST00000264555 Q6ZQT0 140 aa11.27□□□□□ -0.61
PHRF1-201ENST00000264555 IGLV6-57P01721 117 aa11.27□□□□□ -0.61
PHRF1-201ENST00000264555 Q6ZRX8 168 aa11.25□□□□□ -0.61
PHRF1-201ENST00000264555 PRR34Q9NV39 138 aa11.25□□□□□ -0.61
PHRF1-201ENST00000264555 CIRBP-AS1Q8TBR5 109 aa11.25□□□□□ -0.61
PHRF1-201ENST00000264555 A0A1B0GW54 56 aa11.25□□□□□ -0.61
PHRF1-201ENST00000264555 LINC00208Q96KT6 92 aa11.25□□□□□ -0.61
PHRF1-201ENST00000264555 MGAQ8IWI9 3026 aa11.25□□□□□ -0.61
PHRF1-201ENST00000264555 VPREB1P12018 145 aa11.24□□□□□ -0.61
PHRF1-201ENST00000264555 Q6ZRP5 223 aa11.24□□□□□ -0.61
PHRF1-201ENST00000264555 KRTAP10-11P60412 298 aa11.24□□□□□ -0.61
PHRF1-201ENST00000264555 CFAP54Q96N23 3096 aa11.23□□□□□ -0.61
PHRF1-201ENST00000264555 DEFB116Q30KQ4 102 aa11.23□□□□□ -0.61
PHRF1-201ENST00000264555 Q8N9L7 120 aa11.23□□□□□ -0.61
PHRF1-201ENST00000264555 TMEM254Q8TBM7 123 aa11.23□□□□□ -0.61
PHRF1-201ENST00000264555 HCG22E2RYF7 251 aa11.22□□□□□ -0.61
PHRF1-201ENST00000264555 IGHV6-1A0A0B4J1U7 121 aa11.21□□□□□ -0.61
PHRF1-201ENST00000264555 C16orf90A8MZG2 172 aa11.2□□□□□ -0.62
PHRF1-201ENST00000264555 BCE1O60756 84 aa11.2□□□□□ -0.62
PHRF1-201ENST00000264555 FLNBO75369 2602 aaKnown RBP11.19□□□□□ -0.62
PHRF1-201ENST00000264555 FLNAP21333 2647 aaKnown RBP11.19□□□□□ -0.62
PHRF1-201ENST00000264555 NBDYA0A0U1RRE5 68 aa11.18□□□□□ -0.62
PHRF1-201ENST00000264555 TRIOO75962 3097 aa11.18□□□□□ -0.62
PHRF1-201ENST00000264555 CRYGAP11844 174 aa11.17□□□□□ -0.62
PHRF1-201ENST00000264555 Q8NBF4 154 aa11.16□□□□□ -0.62
PHRF1-201ENST00000264555 WDFY4Q6ZS81 3184 aa11.16□□□□□ -0.62
PHRF1-201ENST00000264555 PHF5AQ7RTV0 110 aaKnown RBP11.14□□□□□ -0.63
PHRF1-201ENST00000264555 H0Y9P7 68 aa11.13□□□□□ -0.63
PHRF1-201ENST00000264555 ITPR3Q14573 2671 aa11.13□□□□□ -0.63
PHRF1-201ENST00000264555 XIRP2A4UGR9 3374 aa11.13□□□□□ -0.63
PHRF1-201ENST00000264555 ST20-AS1Q8NBB2 130 aa11.13□□□□□ -0.63
PHRF1-201ENST00000264555 C15orf56Q8N910 161 aa11.12□□□□□ -0.63
PHRF1-201ENST00000264555 LINC00476Q8WZB0 136 aa11.12□□□□□ -0.63
PHRF1-201ENST00000264555 KCNQ1DNQ9H478 68 aa11.12□□□□□ -0.63
PHRF1-201ENST00000264555 K7EIL1 84 aa11.12□□□□□ -0.63
PHRF1-201ENST00000264555 SMIM29Q86T20 159 aa11.12□□□□□ -0.63
PHRF1-201ENST00000264555 SERTAD4-AS1Q5TG53 156 aa11.11□□□□□ -0.63
PHRF1-201ENST00000264555 EPM2AB3EWF7 344 aa11.1□□□□□ -0.63
PHRF1-201ENST00000264555 CENPEQ02224 2701 aa11.1□□□□□ -0.63
PHRF1-201ENST00000264555 FAM168BA1KXE4 195 aa11.09□□□□□ -0.63
PHRF1-201ENST00000264555 LINC00528Q8N1L1 170 aa11.09□□□□□ -0.63
PHRF1-201ENST00000264555 IGLV1-50A0A075B6I6 118 aa11.09□□□□□ -0.63
PHRF1-201ENST00000264555 PMAIP1Q13794 54 aa11.09□□□□□ -0.63
PHRF1-201ENST00000264555 AKAP13Q12802 2813 aa11.07□□□□□ -0.64
PHRF1-201ENST00000264555 hDV103S1A0JD37 113 aa11.07□□□□□ -0.64
PHRF1-201ENST00000264555 RTL8CO15255 209 aa11.06□□□□□ -0.64
PHRF1-201ENST00000264555 FAM104AQ969W3 186 aa11.05□□□□□ -0.64
PHRF1-201ENST00000264555 CHTF8P0CG12 524 aa11.05□□□□□ -0.64
PHRF1-201ENST00000264555 SZT2Q5T011 3432 aa11.05□□□□□ -0.64
PHRF1-201ENST00000264555 MOBPQ13875 183 aa11.04□□□□□ -0.64
PHRF1-201ENST00000264555 TRBV7-4A0A0J9YYF1 115 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms