RNA–Protein interactions for RNA: ENST00000264025.7

NECTIN1-201, Transcript of nectin cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-201ENST00000264025 LRRK2Q5S007 2527 aa13.31□□□□□ -0.28
NECTIN1-201ENST00000264025 SPACA4Q8TDM5 124 aa13.31□□□□□ -0.28
NECTIN1-201ENST00000264025 USP9XQ93008 2570 aaPredicted RBP13.31□□□□□ -0.28
NECTIN1-201ENST00000264025 ELOF1P60002 83 aaKnown RBP13.3□□□□□ -0.28
NECTIN1-201ENST00000264025 TLN2Q9Y4G6 2542 aa13.3□□□□□ -0.28
NECTIN1-201ENST00000264025 A0A1B0GW54 56 aa13.3□□□□□ -0.28
NECTIN1-201ENST00000264025 Q9UF83 564 aa13.3□□□□□ -0.28
NECTIN1-201ENST00000264025 TET2Q6N021 2002 aaPredicted RBP13.28□□□□□ -0.28
NECTIN1-201ENST00000264025 BCE1O60756 84 aa13.27□□□□□ -0.29
NECTIN1-201ENST00000264025 FAM218AQ96MZ4 157 aa13.27□□□□□ -0.29
NECTIN1-201ENST00000264025 SMCPP49901 116 aaPredicted RBP13.25□□□□□ -0.29
NECTIN1-201ENST00000264025 A0A1B0GU69 56 aa13.25□□□□□ -0.29
NECTIN1-201ENST00000264025 ACYP2P14621 99 aa13.24□□□□□ -0.29
NECTIN1-201ENST00000264025 Q6ZRX8 168 aa13.23□□□□□ -0.29
NECTIN1-201ENST00000264025 MUC4Q99102 2169 aa13.23□□□□□ -0.29
NECTIN1-201ENST00000264025 Q8NBF4 154 aa13.22□□□□□ -0.29
NECTIN1-201ENST00000264025 PHF5AQ7RTV0 110 aaKnown RBP13.22□□□□□ -0.29
NECTIN1-201ENST00000264025 LINC00476Q8WZB0 136 aa13.21□□□□□ -0.29
NECTIN1-201ENST00000264025 Q6ZQT0 140 aa13.21□□□□□ -0.29
NECTIN1-201ENST00000264025 LOC110117498A0A087WWA1 95 aa13.2□□□□□ -0.3
NECTIN1-201ENST00000264025 PRO0461Q9UI25 63 aa13.18□□□□□ -0.3
NECTIN1-201ENST00000264025 EPM2AB3EWF7 344 aa13.17□□□□□ -0.3
NECTIN1-201ENST00000264025 H3BPC8 53 aa13.17□□□□□ -0.3
NECTIN1-201ENST00000264025 RTL8CO15255 209 aa13.17□□□□□ -0.3
NECTIN1-201ENST00000264025 C16orf90A8MZG2 172 aa13.17□□□□□ -0.3
NECTIN1-201ENST00000264025 SETD2Q9BYW2 2564 aaPredicted RBP13.16□□□□□ -0.3
NECTIN1-201ENST00000264025 NBDYA0A0U1RRE5 68 aa13.16□□□□□ -0.3
NECTIN1-201ENST00000264025 KRTAP24-1Q3LI83 254 aa13.15□□□□□ -0.3
NECTIN1-201ENST00000264025 Q8NAQ8 132 aa13.15□□□□□ -0.3
NECTIN1-201ENST00000264025 Q6ZRP5 223 aa13.14□□□□□ -0.31
NECTIN1-201ENST00000264025 WDR87Q6ZQQ6 2873 aa13.14□□□□□ -0.31
NECTIN1-201ENST00000264025 GVQW2A0A096LPI5 108 aaPredicted RBP13.13□□□□□ -0.31
NECTIN1-201ENST00000264025 LINC00313P59037 77 aa13.13□□□□□ -0.31
NECTIN1-201ENST00000264025 LINC00588Q9Y4M8 146 aa13.13□□□□□ -0.31
NECTIN1-201ENST00000264025 ST20-AS1Q8NBB2 130 aa13.12□□□□□ -0.31
NECTIN1-201ENST00000264025 USP9YO00507 2555 aaPredicted RBP13.12□□□□□ -0.31
NECTIN1-201ENST00000264025 TRAV22A0A0B4J277 110 aa13.11□□□□□ -0.31
NECTIN1-201ENST00000264025 PRO0628Q9UI54 55 aa13.11□□□□□ -0.31
NECTIN1-201ENST00000264025 PTPRBP23467 1997 aa13.11□□□□□ -0.31
NECTIN1-201ENST00000264025 PKD1L2Q7Z442 2459 aa13.11□□□□□ -0.31
NECTIN1-201ENST00000264025 FAM229AH3BQW9 127 aa13.1□□□□□ -0.31
NECTIN1-201ENST00000264025 TYMSOSQ8TAI1 123 aa13.1□□□□□ -0.31
NECTIN1-201ENST00000264025 ANKRD11Q6UB99 2663 aaPredicted RBP13.1□□□□□ -0.31
NECTIN1-201ENST00000264025 CHTF8P0CG12 524 aa13.1□□□□□ -0.31
NECTIN1-201ENST00000264025 SPAG11AQ6PDA7 123 aa13.1□□□□□ -0.31
NECTIN1-201ENST00000264025 CEP295Q9C0D2 2601 aa13.08□□□□□ -0.31
NECTIN1-201ENST00000264025 COL4A2P08572 1712 aa13.07□□□□□ -0.32
NECTIN1-201ENST00000264025 RPL37AP61513 92 aaKnown RBP13.04□□□□□ -0.32
NECTIN1-201ENST00000264025 KLK9Q2XQG4 91 aa13.04□□□□□ -0.32
NECTIN1-201ENST00000264025 TM2D3Q9BRN9 247 aa13.04□□□□□ -0.32
NECTIN1-201ENST00000264025 RPS28P62857 69 aaKnown RBP13.03□□□□□ -0.32
NECTIN1-201ENST00000264025 TRBV7-4A0A0J9YYF1 115 aa13.03□□□□□ -0.32
NECTIN1-201ENST00000264025 COL27A1Q8IZC6 1860 aaPredicted RBP13.02□□□□□ -0.33
NECTIN1-201ENST00000264025 DNAH10OSP0CZ25 163 aa13.02□□□□□ -0.33
NECTIN1-201ENST00000264025 VPREB1P12018 145 aa13.02□□□□□ -0.33
NECTIN1-201ENST00000264025 LITAFQ99732 161 aa13.02□□□□□ -0.33
NECTIN1-201ENST00000264025 IGLV6-57P01721 117 aa13.01□□□□□ -0.33
NECTIN1-201ENST00000264025 ATP11AUNQ6ZP68 121 aa12.99□□□□□ -0.33
NECTIN1-201ENST00000264025 Q96NJ1 140 aa12.98□□□□□ -0.33
NECTIN1-201ENST00000264025 LOC101927531A0A1B0GV80 90 aa12.98□□□□□ -0.33
NECTIN1-201ENST00000264025 C4orf26Q17RF5 130 aa12.97□□□□□ -0.33
NECTIN1-201ENST00000264025 A8MWP4 228 aa12.97□□□□□ -0.33
NECTIN1-201ENST00000264025 C8orf87E5RJ46 101 aa12.97□□□□□ -0.33
NECTIN1-201ENST00000264025 ZNF462Q96JM2 2506 aa12.96□□□□□ -0.33
NECTIN1-201ENST00000264025 CHD8Q9HCK8 2581 aa12.95□□□□□ -0.34
NECTIN1-201ENST00000264025 FAM168BA1KXE4 195 aa12.95□□□□□ -0.34
NECTIN1-201ENST00000264025 MTORP42345 2549 aa12.93□□□□□ -0.34
NECTIN1-201ENST00000264025 WWC2-AS2Q96NR7 200 aa12.92□□□□□ -0.34
NECTIN1-201ENST00000264025 IGLV8-61A0A075B6I0 122 aa12.91□□□□□ -0.34
NECTIN1-201ENST00000264025 IGLV1-50A0A075B6I6 118 aa12.91□□□□□ -0.34
NECTIN1-201ENST00000264025 SERTAD4-AS1Q5TG53 156 aa12.91□□□□□ -0.34
NECTIN1-201ENST00000264025 MRPL34Q9BQ48 92 aaKnown RBP12.91□□□□□ -0.34
NECTIN1-201ENST00000264025 K7EQZ3 153 aa12.9□□□□□ -0.34
NECTIN1-201ENST00000264025 KCNQ1DNQ9H478 68 aa12.89□□□□□ -0.35
NECTIN1-201ENST00000264025 PLA2G1BP04054 148 aaKnown RBP12.88□□□□□ -0.35
NECTIN1-201ENST00000264025 CSNK1G2-AS1Q8NCQ2 148 aa12.88□□□□□ -0.35
NECTIN1-201ENST00000264025 ERC2-IT1O76042 136 aa12.86□□□□□ -0.35
NECTIN1-201ENST00000264025 SPTBN4Q9H254 2564 aa12.85□□□□□ -0.35
NECTIN1-201ENST00000264025 LINC00528Q8N1L1 170 aa12.85□□□□□ -0.35
NECTIN1-201ENST00000264025 CENPFP49454 3210 aa12.82□□□□□ -0.36
NECTIN1-201ENST00000264025 COA5Q86WW8 74 aa12.81□□□□□ -0.36
NECTIN1-201ENST00000264025 IGFL1Q6UW32 110 aa12.8□□□□□ -0.36
NECTIN1-201ENST00000264025 LINC01600Q96MT4 127 aa12.8□□□□□ -0.36
NECTIN1-201ENST00000264025 PRR34Q9NV39 138 aa12.79□□□□□ -0.36
NECTIN1-201ENST00000264025 ANKRD17O75179 2603 aaKnown RBP12.78□□□□□ -0.36
NECTIN1-201ENST00000264025 C15orf56Q8N910 161 aa12.77□□□□□ -0.37
NECTIN1-201ENST00000264025 F8P00451 2351 aa12.76□□□□□ -0.37
NECTIN1-201ENST00000264025 C8orf17Q9NRJ1 99 aa12.76□□□□□ -0.37
NECTIN1-201ENST00000264025 J3QL48 77 aa12.75□□□□□ -0.37
NECTIN1-201ENST00000264025 POLQO75417 2590 aa12.75□□□□□ -0.37
NECTIN1-201ENST00000264025 PRR15Q8IV56 129 aa12.75□□□□□ -0.37
NECTIN1-201ENST00000264025 KRTAP10-11P60412 298 aa12.75□□□□□ -0.37
NECTIN1-201ENST00000264025 K7EIL1 84 aa12.74□□□□□ -0.37
NECTIN1-201ENST00000264025 DSCR10P59022 87 aa12.74□□□□□ -0.37
NECTIN1-201ENST00000264025 EIF4EBP3O60516 100 aaPredicted RBP12.74□□□□□ -0.37
NECTIN1-201ENST00000264025 C19orf73Q9NVV2 129 aa12.73□□□□□ -0.37
NECTIN1-201ENST00000264025 CYP4F30PQ9H0H9 118 aa12.73□□□□□ -0.37
NECTIN1-201ENST00000264025 SPINT4Q6UDR6 99 aa12.73□□□□□ -0.37
NECTIN1-201ENST00000264025 SSBP3-AS1Q7Z2R9 100 aa12.73□□□□□ -0.37
NECTIN1-201ENST00000264025 ZNF861PO60384 105 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms