RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 MUSTN1Q8IVN3 82 aa18.51■□□□□ 0.55
SMARCD3-201ENST00000262188 M0R2N4 97 aa18.5■□□□□ 0.55
SMARCD3-201ENST00000262188 REG3AQ06141 175 aa18.5■□□□□ 0.55
SMARCD3-201ENST00000262188 IGLV10-54A0A075B6I4 117 aa18.49■□□□□ 0.55
SMARCD3-201ENST00000262188 TSPEAR-AS2P59090 65 aa18.49■□□□□ 0.55
SMARCD3-201ENST00000262188 DAND5Q8N907 189 aa18.49■□□□□ 0.55
SMARCD3-201ENST00000262188 C4orf26Q17RF5 130 aa18.48■□□□□ 0.55
SMARCD3-201ENST00000262188 HYDINQ4G0P3 5121 aa18.48■□□□□ 0.55
SMARCD3-201ENST00000262188 hADV29S1A0JD25 119 aa18.48■□□□□ 0.55
SMARCD3-201ENST00000262188 H7C2G1 150 aa18.48■□□□□ 0.55
SMARCD3-201ENST00000262188 Q9HAA7 133 aa18.48■□□□□ 0.55
SMARCD3-201ENST00000262188 HRCT1Q6UXD1 115 aa18.47■□□□□ 0.55
SMARCD3-201ENST00000262188 SERP2Q8N6R1 65 aa18.46■□□□□ 0.55
SMARCD3-201ENST00000262188 RPL18AQ02543 176 aaKnown RBP18.46■□□□□ 0.55
SMARCD3-201ENST00000262188 PRR34Q9NV39 138 aa18.46■□□□□ 0.55
SMARCD3-201ENST00000262188 NBDYA0A0U1RRE5 68 aa18.44■□□□□ 0.54
SMARCD3-201ENST00000262188 LINC00959A0A1B0GUT2 108 aa18.44■□□□□ 0.54
SMARCD3-201ENST00000262188 CRPP02741 224 aa18.44■□□□□ 0.54
SMARCD3-201ENST00000262188 SACSQ9NZJ4 4579 aa18.43■□□□□ 0.54
SMARCD3-201ENST00000262188 A0A0J9YXV3 536 aa18.43■□□□□ 0.54
SMARCD3-201ENST00000262188 IBA57-AS1B1ANH7 110 aa18.42■□□□□ 0.54
SMARCD3-201ENST00000262188 SMCR5Q8TEV8 140 aa18.42■□□□□ 0.54
SMARCD3-201ENST00000262188 DNAH10Q8IVF4 4471 aa18.42■□□□□ 0.54
SMARCD3-201ENST00000262188 XCL1P47992 114 aa18.4■□□□□ 0.54
SMARCD3-201ENST00000262188 COX6A2Q02221 97 aa18.4■□□□□ 0.54
SMARCD3-201ENST00000262188 LINC00242Q5T6M2 205 aa18.39■□□□□ 0.53
SMARCD3-201ENST00000262188 OXTP01178 125 aa18.38■□□□□ 0.53
SMARCD3-201ENST00000262188 INAFM2P0DMQ5 153 aa18.38■□□□□ 0.53
SMARCD3-201ENST00000262188 CHCHD10Q8WYQ3 142 aaPredicted RBP18.37■□□□□ 0.53
SMARCD3-201ENST00000262188 NDUFC2O95298 119 aa18.37■□□□□ 0.53
SMARCD3-201ENST00000262188 DNAH6Q9C0G6 4158 aa18.36■□□□□ 0.53
SMARCD3-201ENST00000262188 IGKV2D-24A0A075B6R9 120 aa18.35■□□□□ 0.53
SMARCD3-201ENST00000262188 TINCRA0A1B0GVN0 87 aa18.35■□□□□ 0.53
SMARCD3-201ENST00000262188 SS18Q15532 418 aa18.35■□□□□ 0.53
SMARCD3-201ENST00000262188 KMT2CQ8NEZ4 4911 aaKnown RBP18.35■□□□□ 0.53
SMARCD3-201ENST00000262188 MIAQ16674 131 aa18.35■□□□□ 0.53
SMARCD3-201ENST00000262188 Q6ZR54 194 aa18.33■□□□□ 0.53
SMARCD3-201ENST00000262188 A0A0J9YXY3 114 aa18.32■□□□□ 0.52
SMARCD3-201ENST00000262188 EPM2AB3EWF7 344 aa18.32■□□□□ 0.52
SMARCD3-201ENST00000262188 DNAH2Q9P225 4427 aa18.32■□□□□ 0.52
SMARCD3-201ENST00000262188 TRAV8-3A0A0A6YYJ7 113 aa18.31■□□□□ 0.52
SMARCD3-201ENST00000262188 LCE6AA0A183 80 aa18.31■□□□□ 0.52
SMARCD3-201ENST00000262188 KRTAP26-1Q6PEX3 210 aa18.31■□□□□ 0.52
SMARCD3-201ENST00000262188 DSCR8Q96T75 97 aa18.31■□□□□ 0.52
SMARCD3-201ENST00000262188 C1orf43Q9BWL3 253 aa18.31■□□□□ 0.52
SMARCD3-201ENST00000262188 CDKN2A-AS1Q9UH64 79 aa18.3■□□□□ 0.52
SMARCD3-201ENST00000262188 PFN2P35080 140 aa18.29■□□□□ 0.52
SMARCD3-201ENST00000262188 CLEC2BQ92478 149 aa18.28■□□□□ 0.52
SMARCD3-201ENST00000262188 Q6JHZ5 121 aa18.28■□□□□ 0.52
SMARCD3-201ENST00000262188 FAM19A3Q7Z5A8 133 aa18.28■□□□□ 0.52
SMARCD3-201ENST00000262188 LITAFQ99732 161 aa18.28■□□□□ 0.52
SMARCD3-201ENST00000262188 IGHV3OR16-9A0A0B4J2B5 98 aa18.26■□□□□ 0.51
SMARCD3-201ENST00000262188 CD164L2Q6UWJ8 174 aa18.26■□□□□ 0.51
SMARCD3-201ENST00000262188 TIMM17BO60830 172 aa18.26■□□□□ 0.51
SMARCD3-201ENST00000262188 NPC2P61916 151 aa18.25■□□□□ 0.51
SMARCD3-201ENST00000262188 CYSTM1Q9H1C7 97 aa18.25■□□□□ 0.51
SMARCD3-201ENST00000262188 SEC61GP60059 68 aa18.24■□□□□ 0.51
SMARCD3-201ENST00000262188 IGHV3-64A0A075B6Q5 118 aa18.23■□□□□ 0.51
SMARCD3-201ENST00000262188 COX7A2LO14548 114 aa18.22■□□□□ 0.51
SMARCD3-201ENST00000262188 SERP1Q9Y6X1 66 aa18.22■□□□□ 0.51
SMARCD3-201ENST00000262188 RYR2Q92736 4967 aa18.22■□□□□ 0.51
SMARCD3-201ENST00000262188 LECT2O14960 151 aa18.21■□□□□ 0.51
SMARCD3-201ENST00000262188 Q6ZRN7 208 aaPredicted RBP18.21■□□□□ 0.51
SMARCD3-201ENST00000262188 IGLV5-45A0A087WSX0 123 aa18.21■□□□□ 0.5
SMARCD3-201ENST00000262188 C6orf223Q8N319 242 aa18.21■□□□□ 0.5
SMARCD3-201ENST00000262188 RMI2Q96E14 147 aa18.19■□□□□ 0.5
SMARCD3-201ENST00000262188 V9GYY9 64 aa18.19■□□□□ 0.5
SMARCD3-201ENST00000262188 A0A087WZ39 114 aa18.17■□□□□ 0.5
SMARCD3-201ENST00000262188 PSCAO43653 123 aa18.17■□□□□ 0.5
SMARCD3-201ENST00000262188 C1orf134Q5TEV5 83 aa18.17■□□□□ 0.5
SMARCD3-201ENST00000262188 COPS9Q8WXC6 57 aa18.17■□□□□ 0.5
SMARCD3-201ENST00000262188 LINC00336Q6ZUF6 198 aa18.16■□□□□ 0.5
SMARCD3-201ENST00000262188 PRSS2P07478 247 aa18.15■□□□□ 0.5
SMARCD3-201ENST00000262188 FRAS1Q86XX4 4008 aa18.15■□□□□ 0.5
SMARCD3-201ENST00000262188 SMIM1B2RUZ4 78 aa18.15■□□□□ 0.5
SMARCD3-201ENST00000262188 USP17L23D6RBM5 183 aa18.13■□□□□ 0.49
SMARCD3-201ENST00000262188 C15orf56Q8N910 161 aa18.12■□□□□ 0.49
SMARCD3-201ENST00000262188 BAALC-AS2P0C853 105 aa18.11■□□□□ 0.49
SMARCD3-201ENST00000262188 HIGD2BQ4VC39 106 aa18.11■□□□□ 0.49
SMARCD3-201ENST00000262188 FAM236DA0A1B0GTK5 79 aa18.11■□□□□ 0.49
SMARCD3-201ENST00000262188 FAM236CP0DP71 79 aa18.11■□□□□ 0.49
SMARCD3-201ENST00000262188 TOMM7Q9P0U1 55 aa18.1■□□□□ 0.49
SMARCD3-201ENST00000262188 DNAH17Q9UFH2 4485 aa18.1■□□□□ 0.49
SMARCD3-201ENST00000262188 SMIM26A0A096LP01 95 aa18.08■□□□□ 0.49
SMARCD3-201ENST00000262188 RTL8CO15255 209 aa18.08■□□□□ 0.49
SMARCD3-201ENST00000262188 BCE1O60756 84 aa18.08■□□□□ 0.49
SMARCD3-201ENST00000262188 IGHV1-58A0A0C4DH39 117 aa18.08■□□□□ 0.48
SMARCD3-201ENST00000262188 NDUFA12Q9UI09 145 aa18.06■□□□□ 0.48
SMARCD3-201ENST00000262188 RYR3Q15413 4870 aa18.05■□□□□ 0.48
SMARCD3-201ENST00000262188 IGLV5-39A0A0G2JS06 123 aa18.05■□□□□ 0.48
SMARCD3-201ENST00000262188 LRCOL1A6NCL2 159 aa18.05■□□□□ 0.48
SMARCD3-201ENST00000262188 ADAMTSL4-AS1Q5T5F5 129 aa18.05■□□□□ 0.48
SMARCD3-201ENST00000262188 ATP5EP2Q5VTU8 51 aa18.05■□□□□ 0.48
SMARCD3-201ENST00000262188 DNAL4O96015 105 aa18.04■□□□□ 0.48
SMARCD3-201ENST00000262188 TNP2Q05952 138 aa18.02■□□□□ 0.48
SMARCD3-201ENST00000262188 SPAG11BQ08648 103 aa18.02■□□□□ 0.48
SMARCD3-201ENST00000262188 KIAA0087Q14695 138 aa18.02■□□□□ 0.47
SMARCD3-201ENST00000262188 S100A7L2Q5SY68 101 aa18.02■□□□□ 0.47
SMARCD3-201ENST00000262188 LINC01561Q8N1V8 128 aa18.02■□□□□ 0.47
SMARCD3-201ENST00000262188 COX7B2Q8TF08 81 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms