RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 SMIM29Q86T20 159 aa8.39□□□□□ -1.07
SPG11-201ENST00000261866 MUC7Q8TAX7 377 aa8.39□□□□□ -1.07
SPG11-201ENST00000261866 RPL37AP61513 92 aaKnown RBP8.38□□□□□ -1.07
SPG11-201ENST00000261866 FAM229AH3BQW9 127 aa8.38□□□□□ -1.07
SPG11-201ENST00000261866 LIMD2Q9BT23 127 aa8.38□□□□□ -1.07
SPG11-201ENST00000261866 LINC00588Q9Y4M8 146 aa8.38□□□□□ -1.07
SPG11-201ENST00000261866 A0A1B0GU69 56 aa8.37□□□□□ -1.07
SPG11-201ENST00000261866 DNAH12Q6ZR08 3092 aa8.37□□□□□ -1.07
SPG11-201ENST00000261866 KIF25-AS1Q9Y6Z4 181 aa8.36□□□□□ -1.07
SPG11-201ENST00000261866 FN1P02751 2386 aaKnown RBP8.36□□□□□ -1.07
SPG11-201ENST00000261866 TLN2Q9Y4G6 2542 aa8.36□□□□□ -1.07
SPG11-201ENST00000261866 SMIM26A0A096LP01 95 aa8.35□□□□□ -1.07
SPG11-201ENST00000261866 MYO9AB2RTY4 2548 aa8.35□□□□□ -1.07
SPG11-201ENST00000261866 NBDYA0A0U1RRE5 68 aa8.35□□□□□ -1.07
SPG11-201ENST00000261866 TYMSOSQ8TAI1 123 aa8.35□□□□□ -1.07
SPG11-201ENST00000261866 Q96NJ1 140 aa8.35□□□□□ -1.07
SPG11-201ENST00000261866 COX6B2Q6YFQ2 88 aa8.35□□□□□ -1.07
SPG11-201ENST00000261866 ANKRD11Q6UB99 2663 aaPredicted RBP8.34□□□□□ -1.07
SPG11-201ENST00000261866 COX8CQ7Z4L0 72 aa8.34□□□□□ -1.07
SPG11-201ENST00000261866 FAM168BA1KXE4 195 aa8.34□□□□□ -1.08
SPG11-201ENST00000261866 KRTAP10-11P60412 298 aa8.34□□□□□ -1.08
SPG11-201ENST00000261866 ST20-AS1Q8NBB2 130 aa8.33□□□□□ -1.08
SPG11-201ENST00000261866 ZNF462Q96JM2 2506 aa8.33□□□□□ -1.08
SPG11-201ENST00000261866 CEP295Q9C0D2 2601 aa8.33□□□□□ -1.08
SPG11-201ENST00000261866 TMEM254Q8TBM7 123 aa8.32□□□□□ -1.08
SPG11-201ENST00000261866 LINC00846Q9NV44 126 aa8.32□□□□□ -1.08
SPG11-201ENST00000261866 DNAH10OSP0CZ25 163 aa8.31□□□□□ -1.08
SPG11-201ENST00000261866 Q8NAQ8 132 aa8.31□□□□□ -1.08
SPG11-201ENST00000261866 CHD8Q9HCK8 2581 aa8.31□□□□□ -1.08
SPG11-201ENST00000261866 C9orf92A6NGG3 77 aa8.31□□□□□ -1.08
SPG11-201ENST00000261866 IMUPQ9GZP8 106 aa8.3□□□□□ -1.08
SPG11-201ENST00000261866 IGHV3OR16-9A0A0B4J2B5 98 aa8.3□□□□□ -1.08
SPG11-201ENST00000261866 F8WDY8 70 aa8.3□□□□□ -1.08
SPG11-201ENST00000261866 FAM19A4Q96LR4 140 aa8.3□□□□□ -1.08
SPG11-201ENST00000261866 WWC2-AS2Q96NR7 200 aa8.3□□□□□ -1.08
SPG11-201ENST00000261866 EPM2AB3EWF7 344 aa8.29□□□□□ -1.08
SPG11-201ENST00000261866 APLNQ9ULZ1 77 aa8.29□□□□□ -1.08
SPG11-201ENST00000261866 SPTBN4Q9H254 2564 aa8.29□□□□□ -1.08
SPG11-201ENST00000261866 ACYP2P14621 99 aa8.29□□□□□ -1.08
SPG11-201ENST00000261866 LINC00313P59037 77 aa8.29□□□□□ -1.08
SPG11-201ENST00000261866 SMR3BP02814 79 aaPredicted RBP8.28□□□□□ -1.08
SPG11-201ENST00000261866 SETD2Q9BYW2 2564 aaPredicted RBP8.28□□□□□ -1.08
SPG11-201ENST00000261866 SSBP3-AS1Q7Z2R9 100 aa8.28□□□□□ -1.08
SPG11-201ENST00000261866 PCSK5Q92824 1860 aa8.28□□□□□ -1.08
SPG11-201ENST00000261866 SPATA3Q8NHX4 192 aa8.27□□□□□ -1.09
SPG11-201ENST00000261866 KRTAP10-3P60369 221 aa8.27□□□□□ -1.09
SPG11-201ENST00000261866 K7EIL1 84 aa8.26□□□□□ -1.09
SPG11-201ENST00000261866 FAM218AQ96MZ4 157 aa8.26□□□□□ -1.09
SPG11-201ENST00000261866 LINC01561Q8N1V8 128 aa8.25□□□□□ -1.09
SPG11-201ENST00000261866 IGLV5-39A0A0G2JS06 123 aa8.25□□□□□ -1.09
SPG11-201ENST00000261866 LINC01554Q52M75 96 aa8.25□□□□□ -1.09
SPG11-201ENST00000261866 USP9XQ93008 2570 aaPredicted RBP8.24□□□□□ -1.09
SPG11-201ENST00000261866 ATP11AUNQ6ZP68 121 aa8.24□□□□□ -1.09
SPG11-201ENST00000261866 Q6ZRP5 223 aa8.24□□□□□ -1.09
SPG11-201ENST00000261866 POLQO75417 2590 aa8.23□□□□□ -1.09
SPG11-201ENST00000261866 LINC00476Q8WZB0 136 aa8.22□□□□□ -1.09
SPG11-201ENST00000261866 C4orf26Q17RF5 130 aa8.2□□□□□ -1.1
SPG11-201ENST00000261866 IGLV6-57P01721 117 aa8.2□□□□□ -1.1
SPG11-201ENST00000261866 ELOF1P60002 83 aaKnown RBP8.19□□□□□ -1.1
SPG11-201ENST00000261866 Q6ZRX8 168 aa8.18□□□□□ -1.1
SPG11-201ENST00000261866 ANKRD17O75179 2603 aaKnown RBP8.18□□□□□ -1.1
SPG11-201ENST00000261866 H3BNG1 76 aa8.18□□□□□ -1.1
SPG11-201ENST00000261866 C5orf42Q9H799 3197 aa8.17□□□□□ -1.1
SPG11-201ENST00000261866 ANAPC11Q9NYG5 84 aa8.16□□□□□ -1.1
SPG11-201ENST00000261866 Q8NBF4 154 aa8.16□□□□□ -1.1
SPG11-201ENST00000261866 A0A0G2JQZ4 141 aa8.16□□□□□ -1.1
SPG11-201ENST00000261866 A0A1W2PNN7 141 aa8.16□□□□□ -1.1
SPG11-201ENST00000261866 BCE1O60756 84 aa8.14□□□□□ -1.11
SPG11-201ENST00000261866 DSCR10P59022 87 aa8.14□□□□□ -1.11
SPG11-201ENST00000261866 ACANP16112 2415 aa8.14□□□□□ -1.11
SPG11-201ENST00000261866 LINC01546A6NGU7 62 aa8.14□□□□□ -1.11
SPG11-201ENST00000261866 A0A0D9SG42 100 aa8.14□□□□□ -1.11
SPG11-201ENST00000261866 F8P00451 2351 aa8.13□□□□□ -1.11
SPG11-201ENST00000261866 CDIP1Q9H305 208 aa8.13□□□□□ -1.11
SPG11-201ENST00000261866 GVQW2A0A096LPI5 108 aaPredicted RBP8.13□□□□□ -1.11
SPG11-201ENST00000261866 USP9YO00507 2555 aaPredicted RBP8.12□□□□□ -1.11
SPG11-201ENST00000261866 MTORP42345 2549 aa8.12□□□□□ -1.11
SPG11-201ENST00000261866 OBSCN-AS1Q96MR7 158 aa8.12□□□□□ -1.11
SPG11-201ENST00000261866 CSNK1G2-AS1Q8NCQ2 148 aa8.11□□□□□ -1.11
SPG11-201ENST00000261866 FASNP49327 2511 aaKnown RBP8.11□□□□□ -1.11
SPG11-201ENST00000261866 CXCL6P80162 114 aa8.11□□□□□ -1.11
SPG11-201ENST00000261866 PCNTO95613 3336 aa8.11□□□□□ -1.11
SPG11-201ENST00000261866 IGLV5-45A0A087WSX0 123 aa8.1□□□□□ -1.11
SPG11-201ENST00000261866 CEP350Q5VT06 3117 aa8.1□□□□□ -1.11
SPG11-201ENST00000261866 K7EQZ3 153 aa8.1□□□□□ -1.11
SPG11-201ENST00000261866 TM2D3Q9BRN9 247 aa8.09□□□□□ -1.11
SPG11-201ENST00000261866 C9orf129Q5T035 196 aaKnown RBP8.08□□□□□ -1.12
SPG11-201ENST00000261866 Q6ZQT0 140 aa8.08□□□□□ -1.12
SPG11-201ENST00000261866 PKD1L2Q7Z442 2459 aa8.08□□□□□ -1.12
SPG11-201ENST00000261866 SMCPP49901 116 aaPredicted RBP8.08□□□□□ -1.12
SPG11-201ENST00000261866 CASC10Q5T4H9 136 aa8.07□□□□□ -1.12
SPG11-201ENST00000261866 LINC01600Q96MT4 127 aa8.07□□□□□ -1.12
SPG11-201ENST00000261866 C15orf56Q8N910 161 aa8.07□□□□□ -1.12
SPG11-201ENST00000261866 A0A096LNT2 108 aa8.06□□□□□ -1.12
SPG11-201ENST00000261866 VPREB1P12018 145 aa8.06□□□□□ -1.12
SPG11-201ENST00000261866 C19orf73Q9NVV2 129 aa8.05□□□□□ -1.12
SPG11-201ENST00000261866 TP53AIP1Q9HCN2 124 aa8.04□□□□□ -1.12
SPG11-201ENST00000261866 IGLV1-50A0A075B6I6 118 aa8.04□□□□□ -1.12
SPG11-201ENST00000261866 A0A087WTM6 91 aa8.04□□□□□ -1.12
SPG11-201ENST00000261866 C8orf87E5RJ46 101 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms