RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 A0A096LNT2 108 aa9.2□□□□□ -0.94
PDGFRB-201ENST00000261799 Q6ZRX8 168 aa9.2□□□□□ -0.94
PDGFRB-201ENST00000261799 URB1-AS1Q96HZ7 61 aa9.2□□□□□ -0.94
PDGFRB-201ENST00000261799 TP53AIP1Q9HCN2 124 aa9.2□□□□□ -0.94
PDGFRB-201ENST00000261799 Q8N3U1 123 aa9.2□□□□□ -0.94
PDGFRB-201ENST00000261799 ELOF1P60002 83 aaKnown RBP9.19□□□□□ -0.94
PDGFRB-201ENST00000261799 SPAG11AQ6PDA7 123 aa9.19□□□□□ -0.94
PDGFRB-201ENST00000261799 CDIP1Q9H305 208 aa9.19□□□□□ -0.94
PDGFRB-201ENST00000261799 LINC00304Q8N9R0 145 aa9.18□□□□□ -0.94
PDGFRB-201ENST00000261799 A0A087WTM6 91 aa9.18□□□□□ -0.94
PDGFRB-201ENST00000261799 SMR3BP02814 79 aaPredicted RBP9.16□□□□□ -0.94
PDGFRB-201ENST00000261799 LINC01546A6NGU7 62 aa9.15□□□□□ -0.94
PDGFRB-201ENST00000261799 KLK9Q2XQG4 91 aa9.15□□□□□ -0.94
PDGFRB-201ENST00000261799 COX7CP15954 63 aa9.14□□□□□ -0.95
PDGFRB-201ENST00000261799 C1orf64Q8NEQ6 169 aa9.14□□□□□ -0.95
PDGFRB-201ENST00000261799 A0A1B0GW54 56 aa9.14□□□□□ -0.95
PDGFRB-201ENST00000261799 LINC00476Q8WZB0 136 aa9.13□□□□□ -0.95
PDGFRB-201ENST00000261799 TRBV7-7A0A0K0K1E9 115 aa9.13□□□□□ -0.95
PDGFRB-201ENST00000261799 C8orf87E5RJ46 101 aa9.13□□□□□ -0.95
PDGFRB-201ENST00000261799 CSNK1G2-AS1Q8NCQ2 148 aa9.13□□□□□ -0.95
PDGFRB-201ENST00000261799 IGLV5-45A0A087WSX0 123 aa9.12□□□□□ -0.95
PDGFRB-201ENST00000261799 APLNQ9ULZ1 77 aa9.12□□□□□ -0.95
PDGFRB-201ENST00000261799 CHD8Q9HCK8 2581 aa9.12□□□□□ -0.95
PDGFRB-201ENST00000261799 CXCL6P80162 114 aa9.12□□□□□ -0.95
PDGFRB-201ENST00000261799 AGRNO00468 2067 aa9.11□□□□□ -0.95
PDGFRB-201ENST00000261799 KRTAP1-3Q8IUG1 177 aa9.11□□□□□ -0.95
PDGFRB-201ENST00000261799 ST20-AS1Q8NBB2 130 aa9.1□□□□□ -0.95
PDGFRB-201ENST00000261799 A0A096LNJ9 63 aa9.1□□□□□ -0.95
PDGFRB-201ENST00000261799 PCSK5Q92824 1860 aa9.1□□□□□ -0.95
PDGFRB-201ENST00000261799 LINC00528Q8N1L1 170 aa9.09□□□□□ -0.95
PDGFRB-201ENST00000261799 ACYP2P14621 99 aa9.08□□□□□ -0.96
PDGFRB-201ENST00000261799 FAM168BA1KXE4 195 aa9.08□□□□□ -0.96
PDGFRB-201ENST00000261799 JMJD1CQ15652 2540 aa9.07□□□□□ -0.96
PDGFRB-201ENST00000261799 ZNF861PO60384 105 aa9.06□□□□□ -0.96
PDGFRB-201ENST00000261799 A0A087WVE0 104 aa9.06□□□□□ -0.96
PDGFRB-201ENST00000261799 SMIM29Q86T20 159 aa9.05□□□□□ -0.96
PDGFRB-201ENST00000261799 PLXNB1O43157 2135 aa9.05□□□□□ -0.96
PDGFRB-201ENST00000261799 Q9UF83 564 aa9.05□□□□□ -0.96
PDGFRB-201ENST00000261799 KRTAP1-1Q07627 177 aa9.04□□□□□ -0.96
PDGFRB-201ENST00000261799 LINC00310P59036 64 aa9.04□□□□□ -0.96
PDGFRB-201ENST00000261799 IGLV1-50A0A075B6I6 118 aa9.04□□□□□ -0.96
PDGFRB-201ENST00000261799 CASC10Q5T4H9 136 aa9.04□□□□□ -0.96
PDGFRB-201ENST00000261799 MYO9AB2RTY4 2548 aa9.03□□□□□ -0.96
PDGFRB-201ENST00000261799 SSBP3-AS1Q7Z2R9 100 aa9.03□□□□□ -0.96
PDGFRB-201ENST00000261799 ZFYVE26Q68DK2 2539 aa9.02□□□□□ -0.96
PDGFRB-201ENST00000261799 ZNF575Q86XF7 245 aa9.02□□□□□ -0.97
PDGFRB-201ENST00000261799 C9orf92A6NGG3 77 aa9.01□□□□□ -0.97
PDGFRB-201ENST00000261799 SERTAD4-AS1Q5TG53 156 aa9.01□□□□□ -0.97
PDGFRB-201ENST00000261799 RBM12B-AS1Q9P1G2 102 aa9.01□□□□□ -0.97
PDGFRB-201ENST00000261799 LRRK2Q5S007 2527 aa9.01□□□□□ -0.97
PDGFRB-201ENST00000261799 IGLV7-43P04211 117 aa9.01□□□□□ -0.97
PDGFRB-201ENST00000261799 TRAV22A0A0B4J277 110 aa9□□□□□ -0.97
PDGFRB-201ENST00000261799 VPREB1P12018 145 aa9□□□□□ -0.97
PDGFRB-201ENST00000261799 PIEZO2Q9H5I5 2752 aa8.99□□□□□ -0.97
PDGFRB-201ENST00000261799 A0A1B0GU69 56 aa8.99□□□□□ -0.97
PDGFRB-201ENST00000261799 TLN1Q9Y490 2541 aaKnown RBP8.99□□□□□ -0.97
PDGFRB-201ENST00000261799 C9orf163Q8N9P6 203 aa8.99□□□□□ -0.97
PDGFRB-201ENST00000261799 LINC00846Q9NV44 126 aa8.99□□□□□ -0.97
PDGFRB-201ENST00000261799 TMEM254Q8TBM7 123 aa8.98□□□□□ -0.97
PDGFRB-201ENST00000261799 ZNF462Q96JM2 2506 aa8.98□□□□□ -0.97
PDGFRB-201ENST00000261799 SMIM26A0A096LP01 95 aa8.98□□□□□ -0.97
PDGFRB-201ENST00000261799 C15orf56Q8N910 161 aa8.97□□□□□ -0.97
PDGFRB-201ENST00000261799 H3BPC8 53 aa8.97□□□□□ -0.97
PDGFRB-201ENST00000261799 TRBV7-4A0A0J9YYF1 115 aa8.96□□□□□ -0.97
PDGFRB-201ENST00000261799 LOC110117498A0A087WWA1 95 aa8.96□□□□□ -0.98
PDGFRB-201ENST00000261799 A0A0U1RQV1 116 aa8.96□□□□□ -0.98
PDGFRB-201ENST00000261799 LINC00612Q8N6U2 182 aa8.96□□□□□ -0.98
PDGFRB-201ENST00000261799 PRR34Q9NV39 138 aa8.95□□□□□ -0.98
PDGFRB-201ENST00000261799 IGLV6-57P01721 117 aa8.95□□□□□ -0.98
PDGFRB-201ENST00000261799 KCNQ1DNQ9H478 68 aa8.95□□□□□ -0.98
PDGFRB-201ENST00000261799 A8MWP4 228 aa8.94□□□□□ -0.98
PDGFRB-201ENST00000261799 LOC101927531A0A1B0GV80 90 aa8.94□□□□□ -0.98
PDGFRB-201ENST00000261799 CCDC179H3BU77 68 aa8.94□□□□□ -0.98
PDGFRB-201ENST00000261799 TLX1NBP0CAT3 122 aa8.93□□□□□ -0.98
PDGFRB-201ENST00000261799 DSCR10P59022 87 aa8.93□□□□□ -0.98
PDGFRB-201ENST00000261799 SOSTDC1Q6X4U4 206 aa8.93□□□□□ -0.98
PDGFRB-201ENST00000261799 MRPL34Q9BQ48 92 aaKnown RBP8.93□□□□□ -0.98
PDGFRB-201ENST00000261799 OBSCN-AS1Q96MR7 158 aa8.93□□□□□ -0.98
PDGFRB-201ENST00000261799 Q6ZQT0 140 aa8.93□□□□□ -0.98
PDGFRB-201ENST00000261799 ABCA12Q86UK0 2595 aa8.93□□□□□ -0.98
PDGFRB-201ENST00000261799 PLA2G2DQ9UNK4 145 aa8.92□□□□□ -0.98
PDGFRB-201ENST00000261799 CNBPP62633 177 aaKnown RBP8.92□□□□□ -0.98
PDGFRB-201ENST00000261799 IGLV5-37A0A075B6J1 123 aa8.91□□□□□ -0.98
PDGFRB-201ENST00000261799 GIG44P09565 113 aaPredicted RBP8.91□□□□□ -0.98
PDGFRB-201ENST00000261799 C2CD3Q4AC94 2353 aa8.9□□□□□ -0.98
PDGFRB-201ENST00000261799 PSORS1C2Q9UIG4 136 aa8.89□□□□□ -0.99
PDGFRB-201ENST00000261799 TNP2Q05952 138 aa8.88□□□□□ -0.99
PDGFRB-201ENST00000261799 FAM218AQ96MZ4 157 aa8.88□□□□□ -0.99
PDGFRB-201ENST00000261799 C9orf129Q5T035 196 aaKnown RBP8.87□□□□□ -0.99
PDGFRB-201ENST00000261799 PSPHP1O15172 72 aa8.85□□□□□ -0.99
PDGFRB-201ENST00000261799 IGFL1Q6UW32 110 aa8.84□□□□□ -0.99
PDGFRB-201ENST00000261799 FASNP49327 2511 aaKnown RBP8.84□□□□□ -0.99
PDGFRB-201ENST00000261799 Q6ZSA8 131 aa8.83□□□□□ -1
PDGFRB-201ENST00000261799 FN1P02751 2386 aaKnown RBP8.82□□□□□ -1
PDGFRB-201ENST00000261799 A0A1W2PNN7 141 aa8.82□□□□□ -1
PDGFRB-201ENST00000261799 SPRR4Q96PI1 79 aa8.82□□□□□ -1
PDGFRB-201ENST00000261799 A0A1B0GVX0 72 aa8.81□□□□□ -1
PDGFRB-201ENST00000261799 USP9XQ93008 2570 aaPredicted RBP8.81□□□□□ -1
PDGFRB-201ENST00000261799 C8orf17Q9NRJ1 99 aa8.81□□□□□ -1
PDGFRB-201ENST00000261799 EP400Q96L91 3159 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms