RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 CDIP1Q9H305 208 aa8.32□□□□□ -1.08
COL8A1-201ENST00000261037 hDV103S1A0JD37 113 aa8.31□□□□□ -1.08
COL8A1-201ENST00000261037 RTL8CO15255 209 aa8.3□□□□□ -1.08
COL8A1-201ENST00000261037 KRTAP24-1Q3LI83 254 aa8.29□□□□□ -1.08
COL8A1-201ENST00000261037 ST20-AS1Q8NBB2 130 aa8.29□□□□□ -1.08
COL8A1-201ENST00000261037 MYO9AB2RTY4 2548 aa8.28□□□□□ -1.08
COL8A1-201ENST00000261037 RPL37AP61513 92 aaKnown RBP8.28□□□□□ -1.08
COL8A1-201ENST00000261037 PTPRBP23467 1997 aa8.28□□□□□ -1.08
COL8A1-201ENST00000261037 COL27A1Q8IZC6 1860 aaPredicted RBP8.28□□□□□ -1.08
COL8A1-201ENST00000261037 ELOF1P60002 83 aaKnown RBP8.27□□□□□ -1.08
COL8A1-201ENST00000261037 SPTBN4Q9H254 2564 aa8.27□□□□□ -1.09
COL8A1-201ENST00000261037 SMCPP49901 116 aaPredicted RBP8.26□□□□□ -1.09
COL8A1-201ENST00000261037 EPM2AB3EWF7 344 aa8.26□□□□□ -1.09
COL8A1-201ENST00000261037 LINC00476Q8WZB0 136 aa8.26□□□□□ -1.09
COL8A1-201ENST00000261037 A0A1B0GU69 56 aa8.26□□□□□ -1.09
COL8A1-201ENST00000261037 UTRNP46939 3433 aa8.26□□□□□ -1.09
COL8A1-201ENST00000261037 LINC00588Q9Y4M8 146 aa8.24□□□□□ -1.09
COL8A1-201ENST00000261037 PCSK5Q92824 1860 aa8.23□□□□□ -1.09
COL8A1-201ENST00000261037 SPAG11AQ6PDA7 123 aa8.23□□□□□ -1.09
COL8A1-201ENST00000261037 FAM168BA1KXE4 195 aa8.23□□□□□ -1.09
COL8A1-201ENST00000261037 Q6ZRX8 168 aa8.23□□□□□ -1.09
COL8A1-201ENST00000261037 IGLV5-45A0A087WSX0 123 aa8.23□□□□□ -1.09
COL8A1-201ENST00000261037 NBDYA0A0U1RRE5 68 aa8.23□□□□□ -1.09
COL8A1-201ENST00000261037 CHD8Q9HCK8 2581 aa8.23□□□□□ -1.09
COL8A1-201ENST00000261037 Q6ZQT0 140 aa8.22□□□□□ -1.09
COL8A1-201ENST00000261037 TYMSOSQ8TAI1 123 aa8.22□□□□□ -1.09
COL8A1-201ENST00000261037 IGLV8-61A0A075B6I0 122 aa8.21□□□□□ -1.09
COL8A1-201ENST00000261037 Q8NAQ8 132 aa8.21□□□□□ -1.09
COL8A1-201ENST00000261037 LINC00313P59037 77 aa8.21□□□□□ -1.1
COL8A1-201ENST00000261037 C16orf90A8MZG2 172 aa8.21□□□□□ -1.1
COL8A1-201ENST00000261037 ACYP2P14621 99 aa8.21□□□□□ -1.1
COL8A1-201ENST00000261037 Q8NBF4 154 aa8.2□□□□□ -1.1
COL8A1-201ENST00000261037 FAM229AH3BQW9 127 aa8.2□□□□□ -1.1
COL8A1-201ENST00000261037 H3BNG1 76 aa8.2□□□□□ -1.1
COL8A1-201ENST00000261037 DNAH12Q6ZR08 3092 aa8.19□□□□□ -1.1
COL8A1-201ENST00000261037 TP53AIP1Q9HCN2 124 aa8.19□□□□□ -1.1
COL8A1-201ENST00000261037 ABCA12Q86UK0 2595 aa8.19□□□□□ -1.1
COL8A1-201ENST00000261037 Q96NJ1 140 aa8.19□□□□□ -1.1
COL8A1-201ENST00000261037 USP9XQ93008 2570 aaPredicted RBP8.19□□□□□ -1.1
COL8A1-201ENST00000261037 Q6ZRP5 223 aa8.18□□□□□ -1.1
COL8A1-201ENST00000261037 C2CD3Q4AC94 2353 aa8.18□□□□□ -1.1
COL8A1-201ENST00000261037 ZNF462Q96JM2 2506 aa8.18□□□□□ -1.1
COL8A1-201ENST00000261037 TLN2Q9Y4G6 2542 aa8.18□□□□□ -1.1
COL8A1-201ENST00000261037 C4orf26Q17RF5 130 aa8.16□□□□□ -1.1
COL8A1-201ENST00000261037 JMJD1CQ15652 2540 aa8.16□□□□□ -1.1
COL8A1-201ENST00000261037 TM2D3Q9BRN9 247 aa8.16□□□□□ -1.1
COL8A1-201ENST00000261037 PRO0461Q9UI25 63 aa8.16□□□□□ -1.1
COL8A1-201ENST00000261037 PLA2G1BP04054 148 aaKnown RBP8.15□□□□□ -1.1
COL8A1-201ENST00000261037 ZFYVE26Q68DK2 2539 aa8.15□□□□□ -1.1
COL8A1-201ENST00000261037 LOC110117498A0A087WWA1 95 aa8.15□□□□□ -1.1
COL8A1-201ENST00000261037 GVQW2A0A096LPI5 108 aaPredicted RBP8.15□□□□□ -1.1
COL8A1-201ENST00000261037 BCE1O60756 84 aa8.14□□□□□ -1.11
COL8A1-201ENST00000261037 SERTAD4-AS1Q5TG53 156 aa8.14□□□□□ -1.11
COL8A1-201ENST00000261037 LRRK2Q5S007 2527 aa8.13□□□□□ -1.11
COL8A1-201ENST00000261037 USP9YO00507 2555 aaPredicted RBP8.13□□□□□ -1.11
COL8A1-201ENST00000261037 DNAH10OSP0CZ25 163 aa8.11□□□□□ -1.11
COL8A1-201ENST00000261037 TRAV22A0A0B4J277 110 aa8.11□□□□□ -1.11
COL8A1-201ENST00000261037 LITAFQ99732 161 aa8.1□□□□□ -1.11
COL8A1-201ENST00000261037 KRTAP10-11P60412 298 aa8.1□□□□□ -1.11
COL8A1-201ENST00000261037 VPREB1P12018 145 aa8.09□□□□□ -1.11
COL8A1-201ENST00000261037 K7EQZ3 153 aa8.09□□□□□ -1.11
COL8A1-201ENST00000261037 FN1P02751 2386 aaKnown RBP8.09□□□□□ -1.11
COL8A1-201ENST00000261037 ATP11AUNQ6ZP68 121 aa8.09□□□□□ -1.11
COL8A1-201ENST00000261037 IGLV6-57P01721 117 aa8.07□□□□□ -1.12
COL8A1-201ENST00000261037 TRBV7-4A0A0J9YYF1 115 aa8.07□□□□□ -1.12
COL8A1-201ENST00000261037 J3QL48 77 aa8.06□□□□□ -1.12
COL8A1-201ENST00000261037 WWC2-AS2Q96NR7 200 aa8.06□□□□□ -1.12
COL8A1-201ENST00000261037 PKD1L2Q7Z442 2459 aa8.06□□□□□ -1.12
COL8A1-201ENST00000261037 DSCR10P59022 87 aa8.06□□□□□ -1.12
COL8A1-201ENST00000261037 PRO0628Q9UI54 55 aa8.06□□□□□ -1.12
COL8A1-201ENST00000261037 IGLV1-50A0A075B6I6 118 aa8.06□□□□□ -1.12
COL8A1-201ENST00000261037 A0A1B0GW54 56 aa8.06□□□□□ -1.12
COL8A1-201ENST00000261037 A8MWP4 228 aa8.05□□□□□ -1.12
COL8A1-201ENST00000261037 DOPEY1Q5JWR5 2465 aa8.05□□□□□ -1.12
COL8A1-201ENST00000261037 A0A0G2JQZ4 141 aa8.05□□□□□ -1.12
COL8A1-201ENST00000261037 A0A1W2PNN7 141 aa8.05□□□□□ -1.12
COL8A1-201ENST00000261037 C9orf92A6NGG3 77 aa8.05□□□□□ -1.12
COL8A1-201ENST00000261037 H3BPC8 53 aa8.04□□□□□ -1.12
COL8A1-201ENST00000261037 ANKRD17O75179 2603 aaKnown RBP8.04□□□□□ -1.12
COL8A1-201ENST00000261037 CSNK1G2-AS1Q8NCQ2 148 aa8.04□□□□□ -1.12
COL8A1-201ENST00000261037 MUC4Q99102 2169 aa8.03□□□□□ -1.12
COL8A1-201ENST00000261037 MRPL34Q9BQ48 92 aaKnown RBP8.02□□□□□ -1.12
COL8A1-201ENST00000261037 SETD2Q9BYW2 2564 aaPredicted RBP8.02□□□□□ -1.13
COL8A1-201ENST00000261037 K7EIL1 84 aa8.02□□□□□ -1.13
COL8A1-201ENST00000261037 KRTAP10-3P60369 221 aa8.02□□□□□ -1.13
COL8A1-201ENST00000261037 CEP350Q5VT06 3117 aa8.02□□□□□ -1.13
COL8A1-201ENST00000261037 IGFL1Q6UW32 110 aa8.01□□□□□ -1.13
COL8A1-201ENST00000261037 KLK9Q2XQG4 91 aa8.01□□□□□ -1.13
COL8A1-201ENST00000261037 SPINT4Q6UDR6 99 aa8.01□□□□□ -1.13
COL8A1-201ENST00000261037 EIF4EBP3O60516 100 aaPredicted RBP8□□□□□ -1.13
COL8A1-201ENST00000261037 C15orf56Q8N910 161 aa8□□□□□ -1.13
COL8A1-201ENST00000261037 LOC101927531A0A1B0GV80 90 aa8□□□□□ -1.13
COL8A1-201ENST00000261037 COA5Q86WW8 74 aa8□□□□□ -1.13
COL8A1-201ENST00000261037 SMR3BP02814 79 aaPredicted RBP7.99□□□□□ -1.13
COL8A1-201ENST00000261037 ANAPC11Q9NYG5 84 aa7.99□□□□□ -1.13
COL8A1-201ENST00000261037 FASNP49327 2511 aaKnown RBP7.99□□□□□ -1.13
COL8A1-201ENST00000261037 C8orf87E5RJ46 101 aa7.99□□□□□ -1.13
COL8A1-201ENST00000261037 OBSCN-AS1Q96MR7 158 aa7.98□□□□□ -1.13
COL8A1-201ENST00000261037 POLQO75417 2590 aa7.98□□□□□ -1.13
COL8A1-201ENST00000261037 C9orf129Q5T035 196 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms