RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 MUSTN1Q8IVN3 82 aa13.24□□□□□ -0.29
RTCA-201ENST00000260563 SND1-IT1Q9HBX3 110 aa13.24□□□□□ -0.29
RTCA-201ENST00000260563 PTTG1IPP53801 180 aa13.23□□□□□ -0.29
RTCA-201ENST00000260563 GAGE2EQ4V326 116 aa13.23□□□□□ -0.29
RTCA-201ENST00000260563 Q6ZSA8 131 aa13.23□□□□□ -0.29
RTCA-201ENST00000260563 CEND1Q8N111 149 aa13.23□□□□□ -0.29
RTCA-201ENST00000260563 COPS9Q8WXC6 57 aa13.23□□□□□ -0.29
RTCA-201ENST00000260563 GAGE2DQ9UEU5 116 aa13.23□□□□□ -0.29
RTCA-201ENST00000260563 SOSTDC1Q6X4U4 206 aa13.23□□□□□ -0.29
RTCA-201ENST00000260563 FAM30AQ9NZY2 134 aa13.23□□□□□ -0.29
RTCA-201ENST00000260563 A0A096LNI7 61 aa13.22□□□□□ -0.29
RTCA-201ENST00000260563 IGKV2-24A0A0C4DH68 120 aa13.22□□□□□ -0.29
RTCA-201ENST00000260563 EIF4EBP3O60516 100 aaPredicted RBP13.22□□□□□ -0.29
RTCA-201ENST00000260563 GAGE2BQ13066 116 aa13.21□□□□□ -0.29
RTCA-201ENST00000260563 XAGE1AQ9HD64 81 aa13.21□□□□□ -0.29
RTCA-201ENST00000260563 LOC107984156A0A0G2JMH3 177 aa13.2□□□□□ -0.3
RTCA-201ENST00000260563 CHTF8P0CG12 524 aa13.2□□□□□ -0.3
RTCA-201ENST00000260563 ARL17AQ8IVW1 177 aa13.2□□□□□ -0.3
RTCA-201ENST00000260563 PPDPFQ9H3Y8 114 aa13.2□□□□□ -0.3
RTCA-201ENST00000260563 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.2□□□□□ -0.3
RTCA-201ENST00000260563 HINT1P49773 126 aaPredicted RBP13.19□□□□□ -0.3
RTCA-201ENST00000260563 RPL24P83731 157 aaKnown RBP13.19□□□□□ -0.3
RTCA-201ENST00000260563 M0R143 59 aa13.18□□□□□ -0.3
RTCA-201ENST00000260563 CDK2AP2O75956 126 aa13.18□□□□□ -0.3
RTCA-201ENST00000260563 SPACA4Q8TDM5 124 aa13.18□□□□□ -0.3
RTCA-201ENST00000260563 LINC00474Q9P2X8 69 aa13.18□□□□□ -0.3
RTCA-201ENST00000260563 PANO1I0J062 215 aa13.18□□□□□ -0.3
RTCA-201ENST00000260563 BVES-AS1Q5T3Y7 98 aa13.18□□□□□ -0.3
RTCA-201ENST00000260563 FXYD2P54710 66 aa13.17□□□□□ -0.3
RTCA-201ENST00000260563 C9orf129Q5T035 196 aaKnown RBP13.17□□□□□ -0.3
RTCA-201ENST00000260563 HAMPP81172 84 aa13.16□□□□□ -0.3
RTCA-201ENST00000260563 A4D1N5 150 aa13.15□□□□□ -0.3
RTCA-201ENST00000260563 DPH3Q96FX2 82 aa13.15□□□□□ -0.3
RTCA-201ENST00000260563 TMEM238LA0A1B0GVL6 79 aa13.14□□□□□ -0.31
RTCA-201ENST00000260563 A6NJY4 79 aa13.14□□□□□ -0.31
RTCA-201ENST00000260563 XGP55808 180 aa13.14□□□□□ -0.31
RTCA-201ENST00000260563 SCXQ7RTU7 201 aa13.14□□□□□ -0.31
RTCA-201ENST00000260563 RYR1P21817 5038 aa13.12□□□□□ -0.31
RTCA-201ENST00000260563 BATFQ16520 125 aa13.12□□□□□ -0.31
RTCA-201ENST00000260563 CIRBP-AS1Q8TBR5 109 aa13.12□□□□□ -0.31
RTCA-201ENST00000260563 NDUFC2O95298 119 aa13.11□□□□□ -0.31
RTCA-201ENST00000260563 Q8NDZ9 215 aa13.11□□□□□ -0.31
RTCA-201ENST00000260563 KIAA1109Q2LD37 5005 aa13.11□□□□□ -0.31
RTCA-201ENST00000260563 A0A087WYN8 130 aa13.1□□□□□ -0.31
RTCA-201ENST00000260563 HSPG2P98160 4391 aa13.1□□□□□ -0.31
RTCA-201ENST00000260563 SNHG12Q9BXW3 62 aa13.09□□□□□ -0.31
RTCA-201ENST00000260563 NHP2Q9NX24 153 aaKnown RBP13.09□□□□□ -0.31
RTCA-201ENST00000260563 PLA2G2DQ9UNK4 145 aa13.09□□□□□ -0.31
RTCA-201ENST00000260563 FAM168BA1KXE4 195 aa13.08□□□□□ -0.32
RTCA-201ENST00000260563 VPREB1P12018 145 aa13.08□□□□□ -0.32
RTCA-201ENST00000260563 PLAC8Q9NZF1 115 aa13.08□□□□□ -0.32
RTCA-201ENST00000260563 IGKV2-28A0A075B6P5 120 aa13.07□□□□□ -0.32
RTCA-201ENST00000260563 A6NDN8 102 aa13.07□□□□□ -0.32
RTCA-201ENST00000260563 IGKV2D-28P01615 120 aa13.07□□□□□ -0.32
RTCA-201ENST00000260563 CFC1BP0CG36 223 aa13.07□□□□□ -0.32
RTCA-201ENST00000260563 CFC1P0CG37 223 aa13.07□□□□□ -0.32
RTCA-201ENST00000260563 PRR3P79522 188 aaKnown RBP13.07□□□□□ -0.32
RTCA-201ENST00000260563 SERTAD4-AS1Q5TG53 156 aa13.07□□□□□ -0.32
RTCA-201ENST00000260563 A0A0B4J2C4 111 aa13.05□□□□□ -0.32
RTCA-201ENST00000260563 A0A1B0GWB2 263 aa13.05□□□□□ -0.32
RTCA-201ENST00000260563 NCR3O14931 201 aa13.05□□□□□ -0.32
RTCA-201ENST00000260563 FAM19A5Q7Z5A7 132 aaPredicted RBP13.04□□□□□ -0.32
RTCA-201ENST00000260563 RAB37Q96AX2 223 aa13.04□□□□□ -0.32
RTCA-201ENST00000260563 A0A1W2PNN7 141 aa13.03□□□□□ -0.32
RTCA-201ENST00000260563 KRTAP7-1Q8IUC3 87 aa13.03□□□□□ -0.32
RTCA-201ENST00000260563 IGLV5-37A0A075B6J1 123 aa13.03□□□□□ -0.32
RTCA-201ENST00000260563 TRBV10-2A0A0K0K1G8 114 aa13.03□□□□□ -0.32
RTCA-201ENST00000260563 K7ERJ3 54 aa13.03□□□□□ -0.32
RTCA-201ENST00000260563 LINC00337Q8N6G1 96 aa13.03□□□□□ -0.32
RTCA-201ENST00000260563 NKAPP1Q8N9T2 125 aa13.03□□□□□ -0.32
RTCA-201ENST00000260563 TRAV13-2A0A0B4J235 113 aa13.01□□□□□ -0.33
RTCA-201ENST00000260563 M0R378 163 aa13□□□□□ -0.33
RTCA-201ENST00000260563 SMR3BP02814 79 aaPredicted RBP13□□□□□ -0.33
RTCA-201ENST00000260563 PRO1854Q9UHT4 67 aa13□□□□□ -0.33
RTCA-201ENST00000260563 C22orf24Q9Y442 160 aa13□□□□□ -0.33
RTCA-201ENST00000260563 EPM2AB3EWF7 344 aa12.99□□□□□ -0.33
RTCA-201ENST00000260563 OR13C6PQ8NH95 151 aa12.98□□□□□ -0.33
RTCA-201ENST00000260563 M0QXV9 152 aa12.98□□□□□ -0.33
RTCA-201ENST00000260563 S100A7L2Q5SY68 101 aa12.98□□□□□ -0.33
RTCA-201ENST00000260563 RPL13AP40429 203 aaKnown RBP12.97□□□□□ -0.33
RTCA-201ENST00000260563 MRPL55Q7Z7F7 128 aaKnown RBP12.97□□□□□ -0.33
RTCA-201ENST00000260563 LINC00528Q8N1L1 170 aa12.97□□□□□ -0.33
RTCA-201ENST00000260563 COL5A1-AS1Q5SY13 56 aa12.96□□□□□ -0.33
RTCA-201ENST00000260563 C7orf33Q8WU49 177 aa12.96□□□□□ -0.33
RTCA-201ENST00000260563 TMEM126AQ9H061 195 aa12.96□□□□□ -0.33
RTCA-201ENST00000260563 FAT1Q14517 4588 aa12.95□□□□□ -0.34
RTCA-201ENST00000260563 GAGE10A6NGK3 116 aa12.94□□□□□ -0.34
RTCA-201ENST00000260563 IGLV6-57P01721 117 aa12.94□□□□□ -0.34
RTCA-201ENST00000260563 PHF5AQ7RTV0 110 aaKnown RBP12.94□□□□□ -0.34
RTCA-201ENST00000260563 HERC2O95714 4834 aa12.94□□□□□ -0.34
RTCA-201ENST00000260563 TRBV10-3A0A0K0K1G6 114 aa12.93□□□□□ -0.34
RTCA-201ENST00000260563 H7C2G1 150 aa12.93□□□□□ -0.34
RTCA-201ENST00000260563 Q8N1X5 172 aa12.93□□□□□ -0.34
RTCA-201ENST00000260563 LINC00167Q96N53 147 aa12.93□□□□□ -0.34
RTCA-201ENST00000260563 LBHQ53QV2 105 aaPredicted RBP12.93□□□□□ -0.34
RTCA-201ENST00000260563 Q1RN00 199 aa12.92□□□□□ -0.34
RTCA-201ENST00000260563 FAM229AH3BQW9 127 aa12.91□□□□□ -0.34
RTCA-201ENST00000260563 TAX1BP3O14907 124 aa12.9□□□□□ -0.34
RTCA-201ENST00000260563 TSPAN13O95857 204 aa12.9□□□□□ -0.34
RTCA-201ENST00000260563 Q5VSD8 79 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 177.7 ms