RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 A6NDN8 102 aa11.43□□□□□ -0.58
CCDC115-201ENST00000259229 IGKV2-28A0A075B6P5 120 aa11.42□□□□□ -0.58
CCDC115-201ENST00000259229 IGKV2D-28P01615 120 aa11.42□□□□□ -0.58
CCDC115-201ENST00000259229 A0A0B4J2C4 111 aa11.42□□□□□ -0.58
CCDC115-201ENST00000259229 RPL18AQ02543 176 aaKnown RBP11.42□□□□□ -0.58
CCDC115-201ENST00000259229 GAGE2EQ4V326 116 aa11.42□□□□□ -0.58
CCDC115-201ENST00000259229 COL5A1-AS1Q5SY13 56 aa11.42□□□□□ -0.58
CCDC115-201ENST00000259229 C9orf129Q5T035 196 aaKnown RBP11.42□□□□□ -0.58
CCDC115-201ENST00000259229 C9orf163Q8N9P6 203 aa11.42□□□□□ -0.58
CCDC115-201ENST00000259229 GAGE2DQ9UEU5 116 aa11.42□□□□□ -0.58
CCDC115-201ENST00000259229 FAT2Q9NYQ8 4349 aa11.41□□□□□ -0.58
CCDC115-201ENST00000259229 TAX1BP3O14907 124 aa11.41□□□□□ -0.58
CCDC115-201ENST00000259229 LOC107984640A0A0U1RRK4 108 aa11.4□□□□□ -0.58
CCDC115-201ENST00000259229 FUSP35637 526 aaKnown RBP eCLIP11.39□□□□□ -0.59
CCDC115-201ENST00000259229 LBHQ53QV2 105 aaPredicted RBP11.39□□□□□ -0.59
CCDC115-201ENST00000259229 NDUFC2O95298 119 aa11.38□□□□□ -0.59
CCDC115-201ENST00000259229 LINC01620Q4KN68 170 aa11.38□□□□□ -0.59
CCDC115-201ENST00000259229 A0A096LNI7 61 aa11.38□□□□□ -0.59
CCDC115-201ENST00000259229 PRR3P79522 188 aaKnown RBP11.38□□□□□ -0.59
CCDC115-201ENST00000259229 LINC00337Q8N6G1 96 aa11.38□□□□□ -0.59
CCDC115-201ENST00000259229 DNAH11Q96DT5 4516 aa11.37□□□□□ -0.59
CCDC115-201ENST00000259229 RYR2Q92736 4967 aa11.37□□□□□ -0.59
CCDC115-201ENST00000259229 RAB37Q96AX2 223 aa11.37□□□□□ -0.59
CCDC115-201ENST00000259229 VPREB1P12018 145 aa11.36□□□□□ -0.59
CCDC115-201ENST00000259229 GAGE2BQ13066 116 aa11.36□□□□□ -0.59
CCDC115-201ENST00000259229 HECTD4Q9Y4D8 3996 aa11.36□□□□□ -0.59
CCDC115-201ENST00000259229 SDIM1Q6ZPB5 146 aa11.35□□□□□ -0.59
CCDC115-201ENST00000259229 PRO1854Q9UHT4 67 aa11.35□□□□□ -0.59
CCDC115-201ENST00000259229 C16orf90A8MZG2 172 aa11.35□□□□□ -0.59
CCDC115-201ENST00000259229 KRTAP7-1Q8IUC3 87 aa11.35□□□□□ -0.59
CCDC115-201ENST00000259229 KRTAP10-2P60368 255 aa11.34□□□□□ -0.59
CCDC115-201ENST00000259229 SERTAD4-AS1Q5TG53 156 aa11.34□□□□□ -0.59
CCDC115-201ENST00000259229 TSPAN13O95857 204 aa11.33□□□□□ -0.6
CCDC115-201ENST00000259229 PKD1P98161 4303 aa11.32□□□□□ -0.6
CCDC115-201ENST00000259229 FAM168BA1KXE4 195 aa11.32□□□□□ -0.6
CCDC115-201ENST00000259229 NCR3O14931 201 aa11.32□□□□□ -0.6
CCDC115-201ENST00000259229 NAA38Q9BRA0 125 aaKnown RBP11.32□□□□□ -0.6
CCDC115-201ENST00000259229 PGPEP1Q9NXJ5 209 aa11.32□□□□□ -0.6
CCDC115-201ENST00000259229 PLA2G2DQ9UNK4 145 aa11.32□□□□□ -0.6
CCDC115-201ENST00000259229 CHTF8P0CG12 524 aa11.31□□□□□ -0.6
CCDC115-201ENST00000259229 RPL13AP40429 203 aaKnown RBP11.31□□□□□ -0.6
CCDC115-201ENST00000259229 IGLV5-52A0A0A0MRZ9 124 aa11.31□□□□□ -0.6
CCDC115-201ENST00000259229 IGKV2-24A0A0C4DH68 120 aa11.31□□□□□ -0.6
CCDC115-201ENST00000259229 PANO1I0J062 215 aa11.31□□□□□ -0.6
CCDC115-201ENST00000259229 TRAV13-2A0A0B4J235 113 aa11.3□□□□□ -0.6
CCDC115-201ENST00000259229 TRBV10-2A0A0K0K1G8 114 aa11.3□□□□□ -0.6
CCDC115-201ENST00000259229 C9orf118A6NHY6 69 aa11.3□□□□□ -0.6
CCDC115-201ENST00000259229 IGLV5-37A0A075B6J1 123 aa11.29□□□□□ -0.6
CCDC115-201ENST00000259229 H3BUT2 72 aa11.27□□□□□ -0.6
CCDC115-201ENST00000259229 H7C2G1 150 aa11.27□□□□□ -0.6
CCDC115-201ENST00000259229 PKIGQ9Y2B9 76 aa11.27□□□□□ -0.6
CCDC115-201ENST00000259229 A0A1W2PNN7 141 aa11.27□□□□□ -0.61
CCDC115-201ENST00000259229 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.27□□□□□ -0.61
CCDC115-201ENST00000259229 DNAH5Q8TE73 4624 aa11.26□□□□□ -0.61
CCDC115-201ENST00000259229 IGLV6-57P01721 117 aa11.26□□□□□ -0.61
CCDC115-201ENST00000259229 LINC00336Q6ZUF6 198 aa11.26□□□□□ -0.61
CCDC115-201ENST00000259229 FAM19A5Q7Z5A7 132 aaPredicted RBP11.25□□□□□ -0.61
CCDC115-201ENST00000259229 SPACA4Q8TDM5 124 aa11.25□□□□□ -0.61
CCDC115-201ENST00000259229 M0R378 163 aa11.24□□□□□ -0.61
CCDC115-201ENST00000259229 OR13C6PQ8NH95 151 aa11.24□□□□□ -0.61
CCDC115-201ENST00000259229 TRBV10-3A0A0K0K1G6 114 aa11.24□□□□□ -0.61
CCDC115-201ENST00000259229 A0A1B0GV90 55 aa11.24□□□□□ -0.61
CCDC115-201ENST00000259229 A0A1B0GVY2 172 aa11.23□□□□□ -0.61
CCDC115-201ENST00000259229 A0A1W2PPM0 123 aa11.23□□□□□ -0.61
CCDC115-201ENST00000259229 TRIAP1O43715 76 aa11.23□□□□□ -0.61
CCDC115-201ENST00000259229 Q1RN00 199 aa11.23□□□□□ -0.61
CCDC115-201ENST00000259229 SMIM11BQ8TCY0 68 aa11.23□□□□□ -0.61
CCDC115-201ENST00000259229 C7orf33Q8WU49 177 aa11.23□□□□□ -0.61
CCDC115-201ENST00000259229 TMEM126AQ9H061 195 aa11.23□□□□□ -0.61
CCDC115-201ENST00000259229 C22orf24Q9Y442 160 aa11.23□□□□□ -0.61
CCDC115-201ENST00000259229 NKAPP1Q8N9T2 125 aa11.22□□□□□ -0.61
CCDC115-201ENST00000259229 LINC00474Q9P2X8 69 aa11.22□□□□□ -0.61
CCDC115-201ENST00000259229 EPM2AB3EWF7 344 aa11.21□□□□□ -0.61
CCDC115-201ENST00000259229 RPL28P46779 137 aaKnown RBP11.21□□□□□ -0.61
CCDC115-201ENST00000259229 S100A7L2Q5SY68 101 aa11.21□□□□□ -0.61
CCDC115-201ENST00000259229 GAGE10A6NGK3 116 aa11.19□□□□□ -0.62
CCDC115-201ENST00000259229 M0QXV9 152 aa11.19□□□□□ -0.62
CCDC115-201ENST00000259229 MRPL55Q7Z7F7 128 aaKnown RBP11.19□□□□□ -0.62
CCDC115-201ENST00000259229 LINC00167Q96N53 147 aa11.18□□□□□ -0.62
CCDC115-201ENST00000259229 KRTAP10-1P60331 282 aa11.17□□□□□ -0.62
CCDC115-201ENST00000259229 PSMB2P49721 201 aa11.17□□□□□ -0.62
CCDC115-201ENST00000259229 IGLV1-50A0A075B6I6 118 aa11.16□□□□□ -0.62
CCDC115-201ENST00000259229 TRAV23DV6A0A075B6W5 121 aa11.16□□□□□ -0.62
CCDC115-201ENST00000259229 A0A087WYN8 130 aa11.16□□□□□ -0.62
CCDC115-201ENST00000259229 FAM30AQ9NZY2 134 aa11.16□□□□□ -0.62
CCDC115-201ENST00000259229 FABP2P12104 132 aa11.15□□□□□ -0.62
CCDC115-201ENST00000259229 Q6ZSA8 131 aa11.15□□□□□ -0.62
CCDC115-201ENST00000259229 DNAH8Q96JB1 4490 aa11.14□□□□□ -0.63
CCDC115-201ENST00000259229 RPL37AP8A6NKH3 93 aa11.14□□□□□ -0.63
CCDC115-201ENST00000259229 PHF5AQ7RTV0 110 aaKnown RBP11.14□□□□□ -0.63
CCDC115-201ENST00000259229 KCNQ1DNQ9H478 68 aa11.14□□□□□ -0.63
CCDC115-201ENST00000259229 C6orf99Q4VX62 202 aa11.13□□□□□ -0.63
CCDC115-201ENST00000259229 PLAC8Q9NZF1 115 aa11.13□□□□□ -0.63
CCDC115-201ENST00000259229 KRTAP11-1Q8IUC1 163 aa11.13□□□□□ -0.63
CCDC115-201ENST00000259229 TCL1BO95988 128 aa11.12□□□□□ -0.63
CCDC115-201ENST00000259229 SPCS1Q9Y6A9 102 aa11.12□□□□□ -0.63
CCDC115-201ENST00000259229 PKHD1P08F94 4074 aa11.11□□□□□ -0.63
CCDC115-201ENST00000259229 EPPK1P58107 5090 aaKnown RBP11.11□□□□□ -0.63
CCDC115-201ENST00000259229 K7EP34 96 aa11.11□□□□□ -0.63
CCDC115-201ENST00000259229 ZNF73O43830 326 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms