RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 DPM3Q9P2X0 92 aa5.06□□□□□ -1.6
GPNMB-201ENST00000258733 MRPL33O75394 65 aaKnown RBP5.06□□□□□ -1.6
GPNMB-201ENST00000258733 KCNQ1DNQ9H478 68 aa5.06□□□□□ -1.6
GPNMB-201ENST00000258733 ITPR1Q14643 2758 aa5.06□□□□□ -1.6
GPNMB-201ENST00000258733 TRGV4A0A0C4DH28 118 aa5.06□□□□□ -1.6
GPNMB-201ENST00000258733 IGHV3-35A0A0C4DH35 117 aa5.06□□□□□ -1.6
GPNMB-201ENST00000258733 H0Y9P7 68 aa5.06□□□□□ -1.6
GPNMB-201ENST00000258733 H3BQ85 93 aa5.06□□□□□ -1.6
GPNMB-201ENST00000258733 WNK2Q9Y3S1 2297 aa5.05□□□□□ -1.6
GPNMB-201ENST00000258733 LINC00959A0A1B0GUT2 108 aa5.05□□□□□ -1.6
GPNMB-201ENST00000258733 DNAJC9-AS1A6NH13 148 aa5.05□□□□□ -1.6
GPNMB-201ENST00000258733 TNP2Q05952 138 aa5.05□□□□□ -1.6
GPNMB-201ENST00000258733 CELSR3Q9NYQ7 3312 aa5.05□□□□□ -1.6
GPNMB-201ENST00000258733 IGLV11-55A0A075B6I3 123 aa5.05□□□□□ -1.6
GPNMB-201ENST00000258733 COX7BP24311 80 aa5.05□□□□□ -1.6
GPNMB-201ENST00000258733 LINC00575Q6W349 94 aa5.05□□□□□ -1.6
GPNMB-201ENST00000258733 IGHV7-81A0A0B4J1V7 117 aa5.04□□□□□ -1.6
GPNMB-201ENST00000258733 IGHV3-66A0A0C4DH42 116 aa5.04□□□□□ -1.6
GPNMB-201ENST00000258733 IGHV3OR16-12A0A075B7B8 117 aa5.04□□□□□ -1.6
GPNMB-201ENST00000258733 IGHV4-59P01825 116 aa5.03□□□□□ -1.6
GPNMB-201ENST00000258733 USP9XQ93008 2570 aaPredicted RBP5.03□□□□□ -1.6
GPNMB-201ENST00000258733 CHCHD7Q9BUK0 85 aa5.03□□□□□ -1.6
GPNMB-201ENST00000258733 NBEAQ8NFP9 2946 aa5.03□□□□□ -1.6
GPNMB-201ENST00000258733 CHTF8P0CG12 524 aa5.02□□□□□ -1.61
GPNMB-201ENST00000258733 IGKV3-20P01619 116 aa5.02□□□□□ -1.61
GPNMB-201ENST00000258733 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.02□□□□□ -1.61
GPNMB-201ENST00000258733 PATE3B3GLJ2 98 aa5.01□□□□□ -1.61
GPNMB-201ENST00000258733 LINC00467Q9BRT7 94 aa5.01□□□□□ -1.61
GPNMB-201ENST00000258733 F8W735 103 aaPredicted RBP5.01□□□□□ -1.61
GPNMB-201ENST00000258733 IGHV3-23P01764 117 aa5□□□□□ -1.61
GPNMB-201ENST00000258733 Q6ZQY7 126 aa5□□□□□ -1.61
GPNMB-201ENST00000258733 KLK12Q9UKR0 248 aa5□□□□□ -1.61
GPNMB-201ENST00000258733 FBN3Q75N90 2809 aa5□□□□□ -1.61
GPNMB-201ENST00000258733 DEFB124Q8NES8 71 aa4.99□□□□□ -1.61
GPNMB-201ENST00000258733 A8MWP4 228 aa4.99□□□□□ -1.61
GPNMB-201ENST00000258733 IGHV4-38-2P0DP08 117 aa4.99□□□□□ -1.61
GPNMB-201ENST00000258733 KPRPQ5T749 579 aaPredicted RBP4.99□□□□□ -1.61
GPNMB-201ENST00000258733 A0A1W2PNU3 283 aaPredicted RBP4.98□□□□□ -1.61
GPNMB-201ENST00000258733 LUZP6Q538Z0 58 aa4.98□□□□□ -1.61
GPNMB-201ENST00000258733 LINC00483Q53H64 154 aa4.98□□□□□ -1.61
GPNMB-201ENST00000258733 H3BPC8 53 aa4.98□□□□□ -1.61
GPNMB-201ENST00000258733 ZFP36P26651 326 aaKnown RBP4.98□□□□□ -1.61
GPNMB-201ENST00000258733 C8orf17Q9NRJ1 99 aa4.98□□□□□ -1.61
GPNMB-201ENST00000258733 TOMM7Q9P0U1 55 aa4.98□□□□□ -1.61
GPNMB-201ENST00000258733 IGHV1-46P01743 117 aa4.97□□□□□ -1.61
GPNMB-201ENST00000258733 KRTAP25-1Q3LHN0 102 aa4.97□□□□□ -1.61
GPNMB-201ENST00000258733 C9orf163Q8N9P6 203 aa4.97□□□□□ -1.61
GPNMB-201ENST00000258733 ASPMQ8IZT6 3477 aa4.97□□□□□ -1.61
GPNMB-201ENST00000258733 TEP1Q99973 2627 aaKnown RBP4.97□□□□□ -1.61
GPNMB-201ENST00000258733 DSCR9P59020 149 aa4.97□□□□□ -1.61
GPNMB-201ENST00000258733 IGF2RP11717 2491 aa4.97□□□□□ -1.61
GPNMB-201ENST00000258733 IGLV7-46A0A075B6I9 117 aa4.96□□□□□ -1.62
GPNMB-201ENST00000258733 C20orf166-AS1Q96NR2 134 aa4.96□□□□□ -1.62
GPNMB-201ENST00000258733 ZZEF1O43149 2961 aa4.96□□□□□ -1.62
GPNMB-201ENST00000258733 CEP295Q9C0D2 2601 aa4.96□□□□□ -1.62
GPNMB-201ENST00000258733 IGHV3-74A0A0B4J1X5 117 aa4.96□□□□□ -1.62
GPNMB-201ENST00000258733 SPATA8Q6RVD6 105 aa4.96□□□□□ -1.62
GPNMB-201ENST00000258733 FAM215AQ9Y5M1 114 aa4.96□□□□□ -1.62
GPNMB-201ENST00000258733 FRYQ5TBA9 3013 aa4.96□□□□□ -1.62
GPNMB-201ENST00000258733 SPTBN2O15020 2390 aa4.95□□□□□ -1.62
GPNMB-201ENST00000258733 NDUFAF8A1L188 74 aa4.95□□□□□ -1.62
GPNMB-201ENST00000258733 SPENQ96T58 3664 aaKnown RBP4.94□□□□□ -1.62
GPNMB-201ENST00000258733 IGLV1-50A0A075B6I6 118 aa4.94□□□□□ -1.62
GPNMB-201ENST00000258733 PRR34Q9NV39 138 aa4.94□□□□□ -1.62
GPNMB-201ENST00000258733 MYO9AB2RTY4 2548 aa4.94□□□□□ -1.62
GPNMB-201ENST00000258733 UBR5O95071 2799 aaPredicted RBP4.94□□□□□ -1.62
GPNMB-201ENST00000258733 CCL3L1P16619 93 aa4.94□□□□□ -1.62
GPNMB-201ENST00000258733 DEFB113Q30KQ7 82 aa4.94□□□□□ -1.62
GPNMB-201ENST00000258733 NPBQ8NG41 125 aa4.94□□□□□ -1.62
GPNMB-201ENST00000258733 LOC400499M0QZD8 3231 aa4.94□□□□□ -1.62
GPNMB-201ENST00000258733 SPTBN1Q01082 2364 aaKnown RBP4.94□□□□□ -1.62
GPNMB-201ENST00000258733 IGHV4-30-4P0DP06 118 aa4.93□□□□□ -1.62
GPNMB-201ENST00000258733 COX7A1P24310 79 aa4.93□□□□□ -1.62
GPNMB-201ENST00000258733 FBN2P35556 2912 aa4.93□□□□□ -1.62
GPNMB-201ENST00000258733 SPRR4Q96PI1 79 aa4.93□□□□□ -1.62
GPNMB-201ENST00000258733 HECTD1Q9ULT8 2610 aa4.92□□□□□ -1.62
GPNMB-201ENST00000258733 COL6A6A6NMZ7 2263 aa4.92□□□□□ -1.62
GPNMB-201ENST00000258733 A8MTW9 85 aa4.92□□□□□ -1.62
GPNMB-201ENST00000258733 ZNF861PO60384 105 aa4.92□□□□□ -1.62
GPNMB-201ENST00000258733 IGLV1-40P01703 118 aa4.92□□□□□ -1.62
GPNMB-201ENST00000258733 MSMBP08118 114 aa4.92□□□□□ -1.62
GPNMB-201ENST00000258733 Q8N9W7 124 aa4.92□□□□□ -1.62
GPNMB-201ENST00000258733 DEFB1P60022 68 aa4.92□□□□□ -1.62
GPNMB-201ENST00000258733 LINC00528Q8N1L1 170 aa4.92□□□□□ -1.62
GPNMB-201ENST00000258733 PTPN13Q12923 2485 aa4.91□□□□□ -1.62
GPNMB-201ENST00000258733 TEX15Q9BXT5 2789 aa4.91□□□□□ -1.62
GPNMB-201ENST00000258733 AKAP13Q12802 2813 aa4.91□□□□□ -1.62
GPNMB-201ENST00000258733 DEFB108BQ8NET1 73 aa4.91□□□□□ -1.62
GPNMB-201ENST00000258733 PRRC2CQ9Y520 2896 aaKnown RBP4.91□□□□□ -1.62
GPNMB-201ENST00000258733 CNOT1A5YKK6 2376 aaKnown RBP4.91□□□□□ -1.62
GPNMB-201ENST00000258733 DOPEY1Q5JWR5 2465 aa4.91□□□□□ -1.62
GPNMB-201ENST00000258733 K7EQZ3 153 aa4.9□□□□□ -1.62
GPNMB-201ENST00000258733 PROK1P58294 105 aa4.9□□□□□ -1.62
GPNMB-201ENST00000258733 CASC10Q5T4H9 136 aa4.9□□□□□ -1.62
GPNMB-201ENST00000258733 DSPP15924 2871 aaKnown RBP4.9□□□□□ -1.63
GPNMB-201ENST00000258733 DSCR10P59022 87 aa4.9□□□□□ -1.63
GPNMB-201ENST00000258733 IGHV4-30-2A0A087WSY4 118 aa4.89□□□□□ -1.63
GPNMB-201ENST00000258733 LAMA5O15230 3695 aa4.88□□□□□ -1.63
GPNMB-201ENST00000258733 IGKV2D-24A0A075B6R9 120 aa4.88□□□□□ -1.63
GPNMB-201ENST00000258733 A8MUU9 505 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms