RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 CD164L2Q6UWJ8 174 aa10.76□□□□□ -0.69
LRFN1-201ENST00000248668 IMUPQ9GZP8 106 aa10.76□□□□□ -0.69
LRFN1-201ENST00000248668 C6orf223Q8N319 242 aa10.76□□□□□ -0.69
LRFN1-201ENST00000248668 SMIM11BQ8TCY0 68 aa10.76□□□□□ -0.69
LRFN1-201ENST00000248668 Q8IZM0 81 aa10.75□□□□□ -0.69
LRFN1-201ENST00000248668 C2orf48Q96LS8 159 aa10.75□□□□□ -0.69
LRFN1-201ENST00000248668 PRB2P02812 416 aaPredicted RBP10.74□□□□□ -0.69
LRFN1-201ENST00000248668 Q6ZTC4 211 aa10.74□□□□□ -0.69
LRFN1-201ENST00000248668 CMYA5Q8N3K9 4069 aa10.73□□□□□ -0.69
LRFN1-201ENST00000248668 ATOX1O00244 68 aa10.73□□□□□ -0.69
LRFN1-201ENST00000248668 BAALC-AS2P0C853 105 aa10.73□□□□□ -0.69
LRFN1-201ENST00000248668 KIAA0087Q14695 138 aa10.73□□□□□ -0.69
LRFN1-201ENST00000248668 LELP1Q5T871 98 aa10.73□□□□□ -0.69
LRFN1-201ENST00000248668 ACYP1P07311 99 aa10.72□□□□□ -0.69
LRFN1-201ENST00000248668 A0A087WYN8 130 aa10.71□□□□□ -0.69
LRFN1-201ENST00000248668 C10orf25Q5T742 122 aa10.71□□□□□ -0.69
LRFN1-201ENST00000248668 LINC00336Q6ZUF6 198 aa10.71□□□□□ -0.69
LRFN1-201ENST00000248668 LYPD5Q6UWN5 251 aa10.7□□□□□ -0.7
LRFN1-201ENST00000248668 UNQ6190/PRO20217Q6UXQ8 127 aa10.7□□□□□ -0.7
LRFN1-201ENST00000248668 WFDC10BQ8IUB3 73 aa10.7□□□□□ -0.7
LRFN1-201ENST00000248668 CRYGAP11844 174 aa10.7□□□□□ -0.7
LRFN1-201ENST00000248668 RPL28P46779 137 aaKnown RBP10.7□□□□□ -0.7
LRFN1-201ENST00000248668 KPRPQ5T749 579 aaPredicted RBP10.7□□□□□ -0.7
LRFN1-201ENST00000248668 DNAL4O96015 105 aa10.69□□□□□ -0.7
LRFN1-201ENST00000248668 SPAG11BQ08648 103 aa10.69□□□□□ -0.7
LRFN1-201ENST00000248668 ENHOQ6UWT2 76 aa10.68□□□□□ -0.7
LRFN1-201ENST00000248668 NANOS2P60321 138 aaKnown RBP10.68□□□□□ -0.7
LRFN1-201ENST00000248668 TMEM258P61165 79 aa10.68□□□□□ -0.7
LRFN1-201ENST00000248668 Q5XG85 94 aa10.68□□□□□ -0.7
LRFN1-201ENST00000248668 A0A0J9YWU9 116 aa10.68□□□□□ -0.7
LRFN1-201ENST00000248668 SLPIP03973 132 aa10.68□□□□□ -0.7
LRFN1-201ENST00000248668 RPS28P62857 69 aaKnown RBP10.68□□□□□ -0.7
LRFN1-201ENST00000248668 FAM236DA0A1B0GTK5 79 aa10.67□□□□□ -0.7
LRFN1-201ENST00000248668 NCR3O14931 201 aa10.67□□□□□ -0.7
LRFN1-201ENST00000248668 FAM236CP0DP71 79 aa10.67□□□□□ -0.7
LRFN1-201ENST00000248668 LECT2O14960 151 aa10.66□□□□□ -0.7
LRFN1-201ENST00000248668 C9orf129Q5T035 196 aaKnown RBP10.66□□□□□ -0.7
LRFN1-201ENST00000248668 C14orf132Q9NPU4 83 aa10.66□□□□□ -0.7
LRFN1-201ENST00000248668 C22orf24Q9Y442 160 aa10.66□□□□□ -0.7
LRFN1-201ENST00000248668 RPL18AQ02543 176 aaKnown RBP10.66□□□□□ -0.7
LRFN1-201ENST00000248668 Q8NDZ9 215 aa10.66□□□□□ -0.7
LRFN1-201ENST00000248668 C20orf197Q8N268 126 aa10.66□□□□□ -0.7
LRFN1-201ENST00000248668 BRK1Q8WUW1 75 aa10.66□□□□□ -0.7
LRFN1-201ENST00000248668 SEC61GP60059 68 aa10.65□□□□□ -0.7
LRFN1-201ENST00000248668 MRAPQ8TCY5 172 aa10.65□□□□□ -0.7
LRFN1-201ENST00000248668 CYSRT1A8MQ03 144 aa10.65□□□□□ -0.7
LRFN1-201ENST00000248668 TRAV23DV6A0A075B6W5 121 aa10.64□□□□□ -0.71
LRFN1-201ENST00000248668 HIGD2BQ4VC39 106 aa10.64□□□□□ -0.71
LRFN1-201ENST00000248668 SERP2Q8N6R1 65 aa10.64□□□□□ -0.71
LRFN1-201ENST00000248668 USP17L23D6RBM5 183 aa10.63□□□□□ -0.71
LRFN1-201ENST00000248668 CXCL5P42830 114 aa10.62□□□□□ -0.71
LRFN1-201ENST00000248668 LINC01561Q8N1V8 128 aa10.62□□□□□ -0.71
LRFN1-201ENST00000248668 PRR34Q9NV39 138 aa10.62□□□□□ -0.71
LRFN1-201ENST00000248668 ESRGQ1W209 222 aa10.61□□□□□ -0.71
LRFN1-201ENST00000248668 XAGE1AQ9HD64 81 aa10.61□□□□□ -0.71
LRFN1-201ENST00000248668 EGFEM1PQ0D2K5 195 aa10.6□□□□□ -0.71
LRFN1-201ENST00000248668 DEFB131BA0A096LNP1 70 aa10.6□□□□□ -0.71
LRFN1-201ENST00000248668 LINC00846Q9NV44 126 aa10.6□□□□□ -0.71
LRFN1-201ENST00000248668 PRO0628Q9UI54 55 aa10.6□□□□□ -0.71
LRFN1-201ENST00000248668 F8WDY8 70 aa10.59□□□□□ -0.71
LRFN1-201ENST00000248668 GHRHP01286 108 aa10.59□□□□□ -0.71
LRFN1-201ENST00000248668 C11orf45Q8TAV5 145 aa10.59□□□□□ -0.71
LRFN1-201ENST00000248668 S100A7L2Q5SY68 101 aa10.58□□□□□ -0.72
LRFN1-201ENST00000248668 H0YGX0 51 aa10.58□□□□□ -0.72
LRFN1-201ENST00000248668 COX17Q14061 63 aa10.57□□□□□ -0.72
LRFN1-201ENST00000248668 UPK3BQ9BT76 320 aa10.57□□□□□ -0.72
LRFN1-201ENST00000248668 INAFM2P0DMQ5 153 aa10.57□□□□□ -0.72
LRFN1-201ENST00000248668 C6orf48Q9UBA6 75 aa10.56□□□□□ -0.72
LRFN1-201ENST00000248668 V9GYY9 64 aa10.56□□□□□ -0.72
LRFN1-201ENST00000248668 C6orf99Q4VX62 202 aa10.56□□□□□ -0.72
LRFN1-201ENST00000248668 ZNF561-AS1K7EIQ3 104 aa10.55□□□□□ -0.72
LRFN1-201ENST00000248668 IGKV2D-24A0A075B6R9 120 aa10.54□□□□□ -0.72
LRFN1-201ENST00000248668 SNURFQ9Y675 71 aa10.54□□□□□ -0.72
LRFN1-201ENST00000248668 CAMK2N2Q96S95 79 aa10.54□□□□□ -0.72
LRFN1-201ENST00000248668 DNAH3Q8TD57 4116 aa10.53□□□□□ -0.72
LRFN1-201ENST00000248668 MPLKIPQ8TAP9 179 aa10.53□□□□□ -0.72
LRFN1-201ENST00000248668 NDUFC2O95298 119 aa10.52□□□□□ -0.72
LRFN1-201ENST00000248668 RBM3P98179 157 aaKnown RBP10.52□□□□□ -0.73
LRFN1-201ENST00000248668 C1orf195Q5TG92 126 aa10.52□□□□□ -0.73
LRFN1-201ENST00000248668 STAB2Q8WWQ8 2551 aa10.51□□□□□ -0.73
LRFN1-201ENST00000248668 FAM19A1Q7Z5A9 133 aa10.51□□□□□ -0.73
LRFN1-201ENST00000248668 ORMDL1Q9P0S3 153 aa10.5□□□□□ -0.73
LRFN1-201ENST00000248668 LINC00474Q9P2X8 69 aa10.5□□□□□ -0.73
LRFN1-201ENST00000248668 Q6ZRU5 148 aa10.5□□□□□ -0.73
LRFN1-201ENST00000248668 H3BNG1 76 aa10.49□□□□□ -0.73
LRFN1-201ENST00000248668 Q8N814 137 aa10.49□□□□□ -0.73
LRFN1-201ENST00000248668 KRTAP26-1Q6PEX3 210 aa10.48□□□□□ -0.73
LRFN1-201ENST00000248668 C15orf56Q8N910 161 aa10.48□□□□□ -0.73
LRFN1-201ENST00000248668 TENM2Q9NT68 2774 aa10.48□□□□□ -0.73
LRFN1-201ENST00000248668 Q6JHZ5 121 aa10.48□□□□□ -0.73
LRFN1-201ENST00000248668 TRBV10-3A0A0K0K1G6 114 aa10.47□□□□□ -0.73
LRFN1-201ENST00000248668 HUWE1Q7Z6Z7 4374 aaKnown RBP10.46□□□□□ -0.73
LRFN1-201ENST00000248668 K7EIL1 84 aa10.44□□□□□ -0.74
LRFN1-201ENST00000248668 LINC01556Q5JQF7 62 aa10.43□□□□□ -0.74
LRFN1-201ENST00000248668 GVQW2A0A096LPI5 108 aaPredicted RBP10.43□□□□□ -0.74
LRFN1-201ENST00000248668 RMI2Q96E14 147 aa10.43□□□□□ -0.74
LRFN1-201ENST00000248668 LYSTQ99698 3801 aa10.42□□□□□ -0.74
LRFN1-201ENST00000248668 IGLV6-57P01721 117 aa10.42□□□□□ -0.74
LRFN1-201ENST00000248668 CASC10Q5T4H9 136 aa10.42□□□□□ -0.74
LRFN1-201ENST00000248668 LINC00575Q6W349 94 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms