RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 TLN1Q9Y490 2541 aaKnown RBP13.55□□□□□ -0.24
SOX4-201ENST00000244745 CACNA1AO00555 2505 aa13.55□□□□□ -0.24
SOX4-201ENST00000244745 NCOR2Q9Y618 2525 aa13.54□□□□□ -0.24
SOX4-201ENST00000244745 UTRNP46939 3433 aa13.53□□□□□ -0.24
SOX4-201ENST00000244745 SONP18583 2426 aaKnown RBP13.53□□□□□ -0.24
SOX4-201ENST00000244745 CCDC168Q8NDH2 2452 aa13.52□□□□□ -0.25
SOX4-201ENST00000244745 EIF4EBP3O60516 100 aaPredicted RBP13.5□□□□□ -0.25
SOX4-201ENST00000244745 SPINK1P00995 79 aa13.5□□□□□ -0.25
SOX4-201ENST00000244745 BPTFQ12830 3046 aa13.49□□□□□ -0.25
SOX4-201ENST00000244745 SPAG11AQ6PDA7 123 aa13.47□□□□□ -0.25
SOX4-201ENST00000244745 ST20-AS1Q8NBB2 130 aa13.45□□□□□ -0.26
SOX4-201ENST00000244745 Q6ZRX8 168 aa13.44□□□□□ -0.26
SOX4-201ENST00000244745 A0A1B0GW54 56 aa13.44□□□□□ -0.26
SOX4-201ENST00000244745 ABCA2Q9BZC7 2435 aa13.43□□□□□ -0.26
SOX4-201ENST00000244745 Q8NBF4 154 aa13.42□□□□□ -0.26
SOX4-201ENST00000244745 Q8NAQ8 132 aa13.42□□□□□ -0.26
SOX4-201ENST00000244745 LINC00476Q8WZB0 136 aa13.42□□□□□ -0.26
SOX4-201ENST00000244745 H3BNG1 76 aa13.41□□□□□ -0.26
SOX4-201ENST00000244745 A0A1B0GU69 56 aa13.41□□□□□ -0.26
SOX4-201ENST00000244745 IGLV6-57P01721 117 aa13.39□□□□□ -0.27
SOX4-201ENST00000244745 C1orf134Q5TEV5 83 aa13.39□□□□□ -0.27
SOX4-201ENST00000244745 TP53AIP1Q9HCN2 124 aa13.39□□□□□ -0.27
SOX4-201ENST00000244745 ERC2-IT1O76042 136 aa13.39□□□□□ -0.27
SOX4-201ENST00000244745 H3BPC8 53 aa13.38□□□□□ -0.27
SOX4-201ENST00000244745 PHF5AQ7RTV0 110 aaKnown RBP13.38□□□□□ -0.27
SOX4-201ENST00000244745 RPL37AP61513 92 aaKnown RBP13.38□□□□□ -0.27
SOX4-201ENST00000244745 Q6ZRP5 223 aa13.37□□□□□ -0.27
SOX4-201ENST00000244745 LINC00336Q6ZUF6 198 aa13.36□□□□□ -0.27
SOX4-201ENST00000244745 GVQW2A0A096LPI5 108 aaPredicted RBP13.36□□□□□ -0.27
SOX4-201ENST00000244745 MOBPQ13875 183 aa13.35□□□□□ -0.27
SOX4-201ENST00000244745 CSNK1G2-AS1Q8NCQ2 148 aa13.34□□□□□ -0.27
SOX4-201ENST00000244745 MYO9AB2RTY4 2548 aa13.34□□□□□ -0.27
SOX4-201ENST00000244745 VPREB1P12018 145 aa13.34□□□□□ -0.27
SOX4-201ENST00000244745 A8MUN3 132 aa13.34□□□□□ -0.27
SOX4-201ENST00000244745 ACYP2P14621 99 aa13.34□□□□□ -0.27
SOX4-201ENST00000244745 FAM168BA1KXE4 195 aa13.33□□□□□ -0.28
SOX4-201ENST00000244745 KLKP1Q107X0 134 aa13.33□□□□□ -0.28
SOX4-201ENST00000244745 MDFIQ99750 246 aa13.32□□□□□ -0.28
SOX4-201ENST00000244745 CEP350Q5VT06 3117 aa13.32□□□□□ -0.28
SOX4-201ENST00000244745 SERTAD4-AS1Q5TG53 156 aa13.32□□□□□ -0.28
SOX4-201ENST00000244745 C7orf65Q6ZTY9 151 aa13.32□□□□□ -0.28
SOX4-201ENST00000244745 TRAV22A0A0B4J277 110 aa13.31□□□□□ -0.28
SOX4-201ENST00000244745 EPM2AB3EWF7 344 aa13.3□□□□□ -0.28
SOX4-201ENST00000244745 K7EQZ3 153 aa13.3□□□□□ -0.28
SOX4-201ENST00000244745 H7BZZ5 65 aa13.3□□□□□ -0.28
SOX4-201ENST00000244745 LINC00588Q9Y4M8 146 aa13.3□□□□□ -0.28
SOX4-201ENST00000244745 IGKV2D-30A0A075B6S6 120 aa13.29□□□□□ -0.28
SOX4-201ENST00000244745 IGKV2-30P06310 120 aa13.29□□□□□ -0.28
SOX4-201ENST00000244745 TRBV7-4A0A0J9YYF1 115 aa13.28□□□□□ -0.28
SOX4-201ENST00000244745 C9orf129Q5T035 196 aaKnown RBP13.28□□□□□ -0.28
SOX4-201ENST00000244745 CHTF8P0CG12 524 aa13.26□□□□□ -0.29
SOX4-201ENST00000244745 C16orf90A8MZG2 172 aa13.26□□□□□ -0.29
SOX4-201ENST00000244745 MUC4Q99102 2169 aa13.26□□□□□ -0.29
SOX4-201ENST00000244745 DOPEY1Q5JWR5 2465 aa13.24□□□□□ -0.29
SOX4-201ENST00000244745 COA5Q86WW8 74 aa13.23□□□□□ -0.29
SOX4-201ENST00000244745 GIG44P09565 113 aaPredicted RBP13.22□□□□□ -0.29
SOX4-201ENST00000244745 PCNTO95613 3336 aa13.21□□□□□ -0.3
SOX4-201ENST00000244745 ANKRD11Q6UB99 2663 aaPredicted RBP13.2□□□□□ -0.3
SOX4-201ENST00000244745 C8orf87E5RJ46 101 aa13.2□□□□□ -0.3
SOX4-201ENST00000244745 ATP11AUNQ6ZP68 121 aa13.19□□□□□ -0.3
SOX4-201ENST00000244745 ZNF575Q86XF7 245 aa13.19□□□□□ -0.3
SOX4-201ENST00000244745 IGLV1-50A0A075B6I6 118 aa13.18□□□□□ -0.3
SOX4-201ENST00000244745 KRTAP24-1Q3LI83 254 aa13.18□□□□□ -0.3
SOX4-201ENST00000244745 LINC00528Q8N1L1 170 aa13.18□□□□□ -0.3
SOX4-201ENST00000244745 SPACA4Q8TDM5 124 aa13.18□□□□□ -0.3
SOX4-201ENST00000244745 CYP4F30PQ9H0H9 118 aa13.18□□□□□ -0.3
SOX4-201ENST00000244745 FN1P02751 2386 aaKnown RBP13.18□□□□□ -0.3
SOX4-201ENST00000244745 C5orf42Q9H799 3197 aa13.17□□□□□ -0.3
SOX4-201ENST00000244745 CEP295Q9C0D2 2601 aa13.17□□□□□ -0.3
SOX4-201ENST00000244745 DNAH10OSP0CZ25 163 aa13.17□□□□□ -0.3
SOX4-201ENST00000244745 KCNQ1DNQ9H478 68 aa13.16□□□□□ -0.3
SOX4-201ENST00000244745 A8MWP4 228 aa13.16□□□□□ -0.3
SOX4-201ENST00000244745 A0A096LNT2 108 aa13.16□□□□□ -0.3
SOX4-201ENST00000244745 ABCA12Q86UK0 2595 aa13.15□□□□□ -0.3
SOX4-201ENST00000244745 MYO18BQ8IUG5 2567 aa13.14□□□□□ -0.31
SOX4-201ENST00000244745 C15orf56Q8N910 161 aa13.14□□□□□ -0.31
SOX4-201ENST00000244745 USP9XQ93008 2570 aaPredicted RBP13.14□□□□□ -0.31
SOX4-201ENST00000244745 RTL8CO15255 209 aa13.14□□□□□ -0.31
SOX4-201ENST00000244745 C19orf73Q9NVV2 129 aa13.13□□□□□ -0.31
SOX4-201ENST00000244745 IGLV8-61A0A075B6I0 122 aa13.12□□□□□ -0.31
SOX4-201ENST00000244745 PRR34Q9NV39 138 aa13.12□□□□□ -0.31
SOX4-201ENST00000244745 NBDYA0A0U1RRE5 68 aa13.11□□□□□ -0.31
SOX4-201ENST00000244745 KRTAP10-3P60369 221 aa13.1□□□□□ -0.31
SOX4-201ENST00000244745 TLN2Q9Y4G6 2542 aa13.09□□□□□ -0.31
SOX4-201ENST00000244745 PIEZO1Q92508 2521 aa13.08□□□□□ -0.31
SOX4-201ENST00000244745 IGFL1Q6UW32 110 aa13.08□□□□□ -0.31
SOX4-201ENST00000244745 LINC00313P59037 77 aa13.08□□□□□ -0.32
SOX4-201ENST00000244745 CD164Q04900 197 aa13.08□□□□□ -0.32
SOX4-201ENST00000244745 Q8N377 158 aa13.08□□□□□ -0.32
SOX4-201ENST00000244745 LINC01600Q96MT4 127 aa13.08□□□□□ -0.32
SOX4-201ENST00000244745 LRRK2Q5S007 2527 aa13.07□□□□□ -0.32
SOX4-201ENST00000244745 LINC00612Q8N6U2 182 aa13.07□□□□□ -0.32
SOX4-201ENST00000244745 LOC101927531A0A1B0GV80 90 aa13.06□□□□□ -0.32
SOX4-201ENST00000244745 KRTAP10-11P60412 298 aa13.06□□□□□ -0.32
SOX4-201ENST00000244745 A0A0G2JQZ4 141 aa13.05□□□□□ -0.32
SOX4-201ENST00000244745 A0A1W2PNN7 141 aa13.05□□□□□ -0.32
SOX4-201ENST00000244745 OBSCN-AS1Q96MR7 158 aa13.04□□□□□ -0.32
SOX4-201ENST00000244745 KTN1-AS1Q86SY8 53 aa13.02□□□□□ -0.33
SOX4-201ENST00000244745 PLA2G1BP04054 148 aaKnown RBP13.01□□□□□ -0.33
SOX4-201ENST00000244745 MRPL34Q9BQ48 92 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms