RNA–Protein interactions for RNA: ENST00000244709.8

TREM1-201, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TREM1, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-201ENST00000244709 SOSTDC1Q6X4U4 206 aa7.34□□□□□ -1.23
TREM1-201ENST00000244709 LRP1BQ9NZR2 4599 aa7.34□□□□□ -1.24
TREM1-201ENST00000244709 DYNC1H1Q14204 4646 aaKnown RBP7.33□□□□□ -1.24
TREM1-201ENST00000244709 PANO1I0J062 215 aa7.33□□□□□ -1.24
TREM1-201ENST00000244709 KRTAP10-1P60331 282 aa7.33□□□□□ -1.24
TREM1-201ENST00000244709 LINC00308Q8TCZ7 52 aa7.33□□□□□ -1.24
TREM1-201ENST00000244709 HIST1H4GQ99525 98 aa7.33□□□□□ -1.24
TREM1-201ENST00000244709 Q6ZVH6 145 aa7.32□□□□□ -1.24
TREM1-201ENST00000244709 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.32□□□□□ -1.24
TREM1-201ENST00000244709 M0R143 59 aa7.32□□□□□ -1.24
TREM1-201ENST00000244709 MUSTN1Q8IVN3 82 aa7.32□□□□□ -1.24
TREM1-201ENST00000244709 FAM168BA1KXE4 195 aa7.31□□□□□ -1.24
TREM1-201ENST00000244709 IFITM1P13164 125 aa7.31□□□□□ -1.24
TREM1-201ENST00000244709 Q8NDZ9 215 aa7.31□□□□□ -1.24
TREM1-201ENST00000244709 SPACA4Q8TDM5 124 aa7.31□□□□□ -1.24
TREM1-201ENST00000244709 SNHG12Q9BXW3 62 aa7.31□□□□□ -1.24
TREM1-201ENST00000244709 LOC107984156A0A0G2JMH3 177 aa7.3□□□□□ -1.24
TREM1-201ENST00000244709 HSD52Q0P140 79 aa7.3□□□□□ -1.24
TREM1-201ENST00000244709 ARL17AQ8IVW1 177 aa7.3□□□□□ -1.24
TREM1-201ENST00000244709 TAL2Q16559 108 aa7.29□□□□□ -1.24
TREM1-201ENST00000244709 SERTAD4-AS1Q5TG53 156 aa7.29□□□□□ -1.24
TREM1-201ENST00000244709 COPS9Q8WXC6 57 aa7.29□□□□□ -1.24
TREM1-201ENST00000244709 FAM30AQ9NZY2 134 aa7.29□□□□□ -1.24
TREM1-201ENST00000244709 LINC00474Q9P2X8 69 aa7.29□□□□□ -1.24
TREM1-201ENST00000244709 A0A1W2PNN7 141 aa7.28□□□□□ -1.24
TREM1-201ENST00000244709 LCE2DQ5TA82 110 aaPredicted RBP7.28□□□□□ -1.24
TREM1-201ENST00000244709 FAM19A5Q7Z5A7 132 aaPredicted RBP7.28□□□□□ -1.24
TREM1-201ENST00000244709 CEND1Q8N111 149 aa7.28□□□□□ -1.24
TREM1-201ENST00000244709 VPREB1P12018 145 aa7.28□□□□□ -1.24
TREM1-201ENST00000244709 KRTAP7-1Q8IUC3 87 aa7.28□□□□□ -1.24
TREM1-201ENST00000244709 PPDPFQ9H3Y8 114 aa7.28□□□□□ -1.24
TREM1-201ENST00000244709 PRR3P79522 188 aaKnown RBP7.27□□□□□ -1.25
TREM1-201ENST00000244709 RPL24P83731 157 aaKnown RBP7.27□□□□□ -1.25
TREM1-201ENST00000244709 Q6ZSA8 131 aa7.27□□□□□ -1.25
TREM1-201ENST00000244709 DPH3Q96FX2 82 aa7.27□□□□□ -1.25
TREM1-201ENST00000244709 PLA2G2DQ9UNK4 145 aa7.27□□□□□ -1.25
TREM1-201ENST00000244709 A0A087WYN8 130 aa7.26□□□□□ -1.25
TREM1-201ENST00000244709 A4D1N5 150 aa7.26□□□□□ -1.25
TREM1-201ENST00000244709 FXYD2P54710 66 aa7.26□□□□□ -1.25
TREM1-201ENST00000244709 NCR3O14931 201 aa7.25□□□□□ -1.25
TREM1-201ENST00000244709 NDUFC2O95298 119 aa7.25□□□□□ -1.25
TREM1-201ENST00000244709 EPPK1P58107 5090 aaKnown RBP7.25□□□□□ -1.25
TREM1-201ENST00000244709 IGLV5-37A0A075B6J1 123 aa7.25□□□□□ -1.25
TREM1-201ENST00000244709 IGKV2-28A0A075B6P5 120 aa7.25□□□□□ -1.25
TREM1-201ENST00000244709 IGKV2D-28P01615 120 aa7.25□□□□□ -1.25
TREM1-201ENST00000244709 HINT1P49773 126 aaPredicted RBP7.25□□□□□ -1.25
TREM1-201ENST00000244709 HAMPP81172 84 aa7.25□□□□□ -1.25
TREM1-201ENST00000244709 NKAPP1Q8N9T2 125 aa7.25□□□□□ -1.25
TREM1-201ENST00000244709 APOBP04114 4563 aaKnown RBP7.24□□□□□ -1.25
TREM1-201ENST00000244709 M0QXV9 152 aa7.24□□□□□ -1.25
TREM1-201ENST00000244709 BVES-AS1Q5T3Y7 98 aa7.24□□□□□ -1.25
TREM1-201ENST00000244709 SCXQ7RTU7 201 aa7.24□□□□□ -1.25
TREM1-201ENST00000244709 PLAC8Q9NZF1 115 aa7.24□□□□□ -1.25
TREM1-201ENST00000244709 C22orf24Q9Y442 160 aa7.24□□□□□ -1.25
TREM1-201ENST00000244709 CIRBP-AS1Q8TBR5 109 aa7.23□□□□□ -1.25
TREM1-201ENST00000244709 A0A1B0GV90 55 aa7.22□□□□□ -1.25
TREM1-201ENST00000244709 EPM2AB3EWF7 344 aa7.22□□□□□ -1.25
TREM1-201ENST00000244709 COL5A1-AS1Q5SY13 56 aa7.22□□□□□ -1.25
TREM1-201ENST00000244709 PHF5AQ7RTV0 110 aaKnown RBP7.22□□□□□ -1.25
TREM1-201ENST00000244709 TMEM238LA0A1B0GVL6 79 aa7.22□□□□□ -1.25
TREM1-201ENST00000244709 GAGE10A6NGK3 116 aa7.22□□□□□ -1.25
TREM1-201ENST00000244709 A6NJY4 79 aa7.22□□□□□ -1.25
TREM1-201ENST00000244709 M0R378 163 aa7.22□□□□□ -1.25
TREM1-201ENST00000244709 MRPL55Q7Z7F7 128 aaKnown RBP7.22□□□□□ -1.25
TREM1-201ENST00000244709 LINC00337Q8N6G1 96 aa7.22□□□□□ -1.25
TREM1-201ENST00000244709 C7orf33Q8WU49 177 aa7.22□□□□□ -1.25
TREM1-201ENST00000244709 TRBV10-2A0A0K0K1G8 114 aa7.21□□□□□ -1.26
TREM1-201ENST00000244709 CFC1BP0CG36 223 aa7.21□□□□□ -1.26
TREM1-201ENST00000244709 CFC1P0CG37 223 aa7.21□□□□□ -1.26
TREM1-201ENST00000244709 LINC00167Q96N53 147 aa7.21□□□□□ -1.26
TREM1-201ENST00000244709 NHP2Q9NX24 153 aaKnown RBP7.21□□□□□ -1.26
TREM1-201ENST00000244709 BATFQ16520 125 aa7.2□□□□□ -1.26
TREM1-201ENST00000244709 TRBV10-3A0A0K0K1G6 114 aa7.19□□□□□ -1.26
TREM1-201ENST00000244709 K7ERJ3 54 aa7.19□□□□□ -1.26
TREM1-201ENST00000244709 XGP55808 180 aa7.19□□□□□ -1.26
TREM1-201ENST00000244709 A0A0B4J2C4 111 aa7.19□□□□□ -1.26
TREM1-201ENST00000244709 A6NDN8 102 aa7.19□□□□□ -1.26
TREM1-201ENST00000244709 RPL37AP8A6NKH3 93 aa7.19□□□□□ -1.26
TREM1-201ENST00000244709 S100A7L2Q5SY68 101 aa7.19□□□□□ -1.26
TREM1-201ENST00000244709 OR13C6PQ8NH95 151 aa7.19□□□□□ -1.26
TREM1-201ENST00000244709 RAB37Q96AX2 223 aa7.19□□□□□ -1.26
TREM1-201ENST00000244709 TRAV13-2A0A0B4J235 113 aa7.18□□□□□ -1.26
TREM1-201ENST00000244709 IGLV6-57P01721 117 aa7.18□□□□□ -1.26
TREM1-201ENST00000244709 IGLV1-50A0A075B6I6 118 aa7.17□□□□□ -1.26
TREM1-201ENST00000244709 A0A1B0GWB2 263 aa7.17□□□□□ -1.26
TREM1-201ENST00000244709 RPL13AP40429 203 aaKnown RBP7.17□□□□□ -1.26
TREM1-201ENST00000244709 UBE2BP63146 152 aa7.17□□□□□ -1.26
TREM1-201ENST00000244709 KRTAP11-1Q8IUC1 163 aa7.17□□□□□ -1.26
TREM1-201ENST00000244709 TMEM126AQ9H061 195 aa7.16□□□□□ -1.26
TREM1-201ENST00000244709 H7C2G1 150 aa7.15□□□□□ -1.27
TREM1-201ENST00000244709 PRO1854Q9UHT4 67 aa7.15□□□□□ -1.27
TREM1-201ENST00000244709 TRAV23DV6A0A075B6W5 121 aa7.14□□□□□ -1.27
TREM1-201ENST00000244709 PRYO14603 147 aa7.13□□□□□ -1.27
TREM1-201ENST00000244709 KCNQ1DNQ9H478 68 aa7.13□□□□□ -1.27
TREM1-201ENST00000244709 HSPG2P98160 4391 aa7.13□□□□□ -1.27
TREM1-201ENST00000244709 CDK2AP2O75956 126 aa7.12□□□□□ -1.27
TREM1-201ENST00000244709 SMIM11BQ8TCY0 68 aa7.12□□□□□ -1.27
TREM1-201ENST00000244709 SMR3BP02814 79 aaPredicted RBP7.12□□□□□ -1.27
TREM1-201ENST00000244709 RYR1P21817 5038 aa7.12□□□□□ -1.27
TREM1-201ENST00000244709 Q1RN00 199 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms