RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 SPATA3Q8NHX4 192 aa10.51□□□□□ -0.73
DDX55-201ENST00000238146 ACANP16112 2415 aa10.51□□□□□ -0.73
DDX55-201ENST00000238146 IGLV6-57P01721 117 aa10.51□□□□□ -0.73
DDX55-201ENST00000238146 SPAG11BQ08648 103 aa10.5□□□□□ -0.73
DDX55-201ENST00000238146 Q6ZQY7 126 aa10.5□□□□□ -0.73
DDX55-201ENST00000238146 USP24Q9UPU5 2620 aa10.49□□□□□ -0.73
DDX55-201ENST00000238146 Q6ZVQ6 151 aa10.49□□□□□ -0.73
DDX55-201ENST00000238146 DEFB4AO15263 64 aa10.49□□□□□ -0.73
DDX55-201ENST00000238146 HAMPP81172 84 aa10.49□□□□□ -0.73
DDX55-201ENST00000238146 A0A0J9YWU9 116 aa10.48□□□□□ -0.73
DDX55-201ENST00000238146 CYSRT1A8MQ03 144 aa10.48□□□□□ -0.73
DDX55-201ENST00000238146 LYRM9A8MSI8 78 aa10.48□□□□□ -0.73
DDX55-201ENST00000238146 IGHV4-30-4P0DP06 118 aa10.48□□□□□ -0.73
DDX55-201ENST00000238146 Q5XG85 94 aa10.48□□□□□ -0.73
DDX55-201ENST00000238146 ZNF843Q8N446 348 aa10.48□□□□□ -0.73
DDX55-201ENST00000238146 MUC7Q8TAX7 377 aa10.48□□□□□ -0.73
DDX55-201ENST00000238146 TRAV7A0A075B6U4 112 aa10.47□□□□□ -0.73
DDX55-201ENST00000238146 BCE1O60756 84 aa10.47□□□□□ -0.73
DDX55-201ENST00000238146 KRTAP1-1Q07627 177 aa10.47□□□□□ -0.73
DDX55-201ENST00000238146 C4orf26Q17RF5 130 aa10.47□□□□□ -0.73
DDX55-201ENST00000238146 LINC00482Q8N8I6 264 aa10.47□□□□□ -0.73
DDX55-201ENST00000238146 C9orf66Q5T8R8 295 aa10.46□□□□□ -0.74
DDX55-201ENST00000238146 TRAV10A0A0B4J240 114 aa10.45□□□□□ -0.74
DDX55-201ENST00000238146 H7BZZ5 65 aa10.44□□□□□ -0.74
DDX55-201ENST00000238146 PDE6GP18545 87 aa10.44□□□□□ -0.74
DDX55-201ENST00000238146 FAM236DA0A1B0GTK5 79 aa10.44□□□□□ -0.74
DDX55-201ENST00000238146 FAM236CP0DP71 79 aa10.44□□□□□ -0.74
DDX55-201ENST00000238146 ANK3Q12955 4377 aaKnown RBP10.44□□□□□ -0.74
DDX55-201ENST00000238146 KRTAP10-3P60369 221 aa10.43□□□□□ -0.74
DDX55-201ENST00000238146 DEFB135Q30KP9 77 aa10.43□□□□□ -0.74
DDX55-201ENST00000238146 CXCL6P80162 114 aa10.42□□□□□ -0.74
DDX55-201ENST00000238146 DAD1P61803 113 aa10.42□□□□□ -0.74
DDX55-201ENST00000238146 H3BQ85 93 aa10.41□□□□□ -0.74
DDX55-201ENST00000238146 DIRC1Q969H9 104 aa10.41□□□□□ -0.74
DDX55-201ENST00000238146 XAGE1AQ9HD64 81 aa10.41□□□□□ -0.74
DDX55-201ENST00000238146 KLKP1Q107X0 134 aa10.41□□□□□ -0.74
DDX55-201ENST00000238146 HRCT1Q6UXD1 115 aa10.41□□□□□ -0.74
DDX55-201ENST00000238146 KLK12Q9UKR0 248 aa10.41□□□□□ -0.74
DDX55-201ENST00000238146 PRR34Q9NV39 138 aa10.41□□□□□ -0.74
DDX55-201ENST00000238146 C6orf48Q9UBA6 75 aa10.41□□□□□ -0.74
DDX55-201ENST00000238146 GVQW2A0A096LPI5 108 aaPredicted RBP10.4□□□□□ -0.74
DDX55-201ENST00000238146 TRBV7-4A0A0J9YYF1 115 aa10.4□□□□□ -0.74
DDX55-201ENST00000238146 CELA1Q9UNI1 258 aa10.4□□□□□ -0.74
DDX55-201ENST00000238146 LELP1Q5T871 98 aa10.4□□□□□ -0.75
DDX55-201ENST00000238146 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.39□□□□□ -0.75
DDX55-201ENST00000238146 EPM2AB3EWF7 344 aa10.39□□□□□ -0.75
DDX55-201ENST00000238146 ZNF73O43830 326 aaPredicted RBP10.39□□□□□ -0.75
DDX55-201ENST00000238146 SNURFQ9Y675 71 aa10.39□□□□□ -0.75
DDX55-201ENST00000238146 WIPF1O43516 503 aa10.38□□□□□ -0.75
DDX55-201ENST00000238146 SCXQ7RTU7 201 aa10.38□□□□□ -0.75
DDX55-201ENST00000238146 COX7BP24311 80 aa10.37□□□□□ -0.75
DDX55-201ENST00000238146 RMI2Q96E14 147 aa10.37□□□□□ -0.75
DDX55-201ENST00000238146 VWFP04275 2813 aa10.37□□□□□ -0.75
DDX55-201ENST00000238146 SERP1Q9Y6X1 66 aa10.37□□□□□ -0.75
DDX55-201ENST00000238146 HTN3P15516 51 aa10.36□□□□□ -0.75
DDX55-201ENST00000238146 ELOF1P60002 83 aaKnown RBP10.36□□□□□ -0.75
DDX55-201ENST00000238146 HIVEP2P31629 2446 aa10.35□□□□□ -0.75
DDX55-201ENST00000238146 Q8NAQ8 132 aa10.34□□□□□ -0.75
DDX55-201ENST00000238146 TM2D3Q9BRN9 247 aa10.34□□□□□ -0.75
DDX55-201ENST00000238146 PDZD2O15018 2839 aa10.34□□□□□ -0.75
DDX55-201ENST00000238146 TRBV7-6A0A0J9YX20 115 aa10.33□□□□□ -0.76
DDX55-201ENST00000238146 F8WEM9 126 aa10.32□□□□□ -0.76
DDX55-201ENST00000238146 VPREB1P12018 145 aa10.32□□□□□ -0.76
DDX55-201ENST00000238146 APOC4P55056 127 aa10.32□□□□□ -0.76
DDX55-201ENST00000238146 SPART-AS1P0CW21 52 aa10.3□□□□□ -0.76
DDX55-201ENST00000238146 MIFP14174 115 aa10.3□□□□□ -0.76
DDX55-201ENST00000238146 HIGD2BQ4VC39 106 aa10.3□□□□□ -0.76
DDX55-201ENST00000238146 CAMK2N2Q96S95 79 aa10.29□□□□□ -0.76
DDX55-201ENST00000238146 LINC00528Q8N1L1 170 aa10.28□□□□□ -0.76
DDX55-201ENST00000238146 M0R378 163 aa10.28□□□□□ -0.76
DDX55-201ENST00000238146 ITPR2Q14571 2701 aa10.27□□□□□ -0.77
DDX55-201ENST00000238146 NREPQ16612 68 aa10.27□□□□□ -0.77
DDX55-201ENST00000238146 BPY2O14599 106 aa10.26□□□□□ -0.77
DDX55-201ENST00000238146 NDUFC1O43677 76 aa10.26□□□□□ -0.77
DDX55-201ENST00000238146 EGFEM1PQ0D2K5 195 aa10.26□□□□□ -0.77
DDX55-201ENST00000238146 Q6ZRU5 148 aa10.26□□□□□ -0.77
DDX55-201ENST00000238146 Q8N9L7 120 aa10.26□□□□□ -0.77
DDX55-201ENST00000238146 KRTAP26-1Q6PEX3 210 aa10.24□□□□□ -0.77
DDX55-201ENST00000238146 SMR3AQ99954 134 aa10.24□□□□□ -0.77
DDX55-201ENST00000238146 TENM4Q6N022 2769 aa10.23□□□□□ -0.77
DDX55-201ENST00000238146 FP248Q71RG6 208 aaPredicted RBP10.23□□□□□ -0.77
DDX55-201ENST00000238146 WFDC10BQ8IUB3 73 aa10.23□□□□□ -0.77
DDX55-201ENST00000238146 TMEM254Q8TBM7 123 aa10.23□□□□□ -0.77
DDX55-201ENST00000238146 SMIM26A0A096LP01 95 aa10.22□□□□□ -0.77
DDX55-201ENST00000238146 IGKV4-1P06312 121 aa10.22□□□□□ -0.77
DDX55-201ENST00000238146 C15orf56Q8N910 161 aa10.21□□□□□ -0.77
DDX55-201ENST00000238146 HIVEP1P15822 2718 aa10.2□□□□□ -0.78
DDX55-201ENST00000238146 ERC2-IT1O76042 136 aa10.2□□□□□ -0.78
DDX55-201ENST00000238146 LINC00336Q6ZUF6 198 aa10.2□□□□□ -0.78
DDX55-201ENST00000238146 Q6ZRP5 223 aa10.19□□□□□ -0.78
DDX55-201ENST00000238146 ATP5EP56381 51 aaPredicted RBP10.19□□□□□ -0.78
DDX55-201ENST00000238146 OCR1Q9BZK8 76 aa10.19□□□□□ -0.78
DDX55-201ENST00000238146 C3orf84H3BNL1 204 aa10.18□□□□□ -0.78
DDX55-201ENST00000238146 LINC00474Q9P2X8 69 aa10.18□□□□□ -0.78
DDX55-201ENST00000238146 TENM1Q9UKZ4 2725 aa10.17□□□□□ -0.78
DDX55-201ENST00000238146 KPRPQ5T749 579 aaPredicted RBP10.16□□□□□ -0.78
DDX55-201ENST00000238146 MRAPQ8TCY5 172 aa10.16□□□□□ -0.78
DDX55-201ENST00000238146 NOTCH2Q04721 2471 aa10.15□□□□□ -0.78
DDX55-201ENST00000238146 UNC79Q9P2D8 2635 aa10.15□□□□□ -0.78
DDX55-201ENST00000238146 Q8N377 158 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms