RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 IGKV2D-26A0A0A0MRZ7 120 aa7.33□□□□□ -1.24
TNFAIP3-201ENST00000237289 NDUFC2-KCTD14E9PQ53 114 aa7.32□□□□□ -1.24
TNFAIP3-201ENST00000237289 MAPKAPK5-AS1Q8N8E1 139 aa7.32□□□□□ -1.24
TNFAIP3-201ENST00000237289 HUWE1Q7Z6Z7 4374 aaKnown RBP7.32□□□□□ -1.24
TNFAIP3-201ENST00000237289 TENM2Q9NT68 2774 aa7.32□□□□□ -1.24
TNFAIP3-201ENST00000237289 LINC01620Q4KN68 170 aa7.32□□□□□ -1.24
TNFAIP3-201ENST00000237289 C9JAW5 83 aa7.31□□□□□ -1.24
TNFAIP3-201ENST00000237289 IFITM1P13164 125 aa7.31□□□□□ -1.24
TNFAIP3-201ENST00000237289 C10orf25Q5T742 122 aa7.31□□□□□ -1.24
TNFAIP3-201ENST00000237289 FAM19A5Q7Z5A7 132 aaPredicted RBP7.31□□□□□ -1.24
TNFAIP3-201ENST00000237289 SND1-IT1Q9HBX3 110 aa7.31□□□□□ -1.24
TNFAIP3-201ENST00000237289 C6orf48Q9UBA6 75 aa7.31□□□□□ -1.24
TNFAIP3-201ENST00000237289 DNAH9Q9NYC9 4486 aa7.3□□□□□ -1.24
TNFAIP3-201ENST00000237289 FXYD2P54710 66 aa7.3□□□□□ -1.24
TNFAIP3-201ENST00000237289 TSPEAR-AS2P59090 65 aa7.3□□□□□ -1.24
TNFAIP3-201ENST00000237289 C7orf33Q8WU49 177 aa7.3□□□□□ -1.24
TNFAIP3-201ENST00000237289 FUSP35637 526 aaKnown RBP eCLIP7.29□□□□□ -1.24
TNFAIP3-201ENST00000237289 C9orf163Q8N9P6 203 aa7.29□□□□□ -1.24
TNFAIP3-201ENST00000237289 F8W1H4 67 aa7.28□□□□□ -1.24
TNFAIP3-201ENST00000237289 KIAA0087Q14695 138 aa7.28□□□□□ -1.24
TNFAIP3-201ENST00000237289 CNBPP62633 177 aaKnown RBP7.28□□□□□ -1.24
TNFAIP3-201ENST00000237289 KRTAP26-1Q6PEX3 210 aa7.28□□□□□ -1.24
TNFAIP3-201ENST00000237289 LRCOL1A6NCL2 159 aa7.27□□□□□ -1.25
TNFAIP3-201ENST00000237289 TIMM17BO60830 172 aa7.27□□□□□ -1.25
TNFAIP3-201ENST00000237289 MUSTN1Q8IVN3 82 aa7.27□□□□□ -1.25
TNFAIP3-201ENST00000237289 DNAH3Q8TD57 4116 aa7.27□□□□□ -1.25
TNFAIP3-201ENST00000237289 NCR3O14931 201 aa7.26□□□□□ -1.25
TNFAIP3-201ENST00000237289 Q6ZRN7 208 aaPredicted RBP7.26□□□□□ -1.25
TNFAIP3-201ENST00000237289 TAL2Q16559 108 aa7.25□□□□□ -1.25
TNFAIP3-201ENST00000237289 TRAV13-2A0A0B4J235 113 aa7.25□□□□□ -1.25
TNFAIP3-201ENST00000237289 CEND1Q8N111 149 aa7.25□□□□□ -1.25
TNFAIP3-201ENST00000237289 LINC00308Q8TCZ7 52 aa7.25□□□□□ -1.25
TNFAIP3-201ENST00000237289 SPANXCQ9NY87 97 aa7.25□□□□□ -1.25
TNFAIP3-201ENST00000237289 PRKDCP78527 4128 aaKnown RBP7.24□□□□□ -1.25
TNFAIP3-201ENST00000237289 HIGD1BQ9P298 99 aa7.24□□□□□ -1.25
TNFAIP3-201ENST00000237289 M0QXV9 152 aa7.24□□□□□ -1.25
TNFAIP3-201ENST00000237289 PPDPFLQ8WWR9 84 aa7.24□□□□□ -1.25
TNFAIP3-201ENST00000237289 CHTF8P0CG12 524 aa7.24□□□□□ -1.25
TNFAIP3-201ENST00000237289 A0A096LNI7 61 aa7.23□□□□□ -1.25
TNFAIP3-201ENST00000237289 Q6ZRP5 223 aa7.22□□□□□ -1.25
TNFAIP3-201ENST00000237289 SLC25A20O43772 301 aa7.22□□□□□ -1.25
TNFAIP3-201ENST00000237289 COL7A1Q02388 2944 aa7.22□□□□□ -1.25
TNFAIP3-201ENST00000237289 A4D1N5 150 aa7.22□□□□□ -1.25
TNFAIP3-201ENST00000237289 SPANXDQ9BXN6 97 aa7.22□□□□□ -1.25
TNFAIP3-201ENST00000237289 SPANXB1Q9NS25 103 aaPredicted RBP7.22□□□□□ -1.25
TNFAIP3-201ENST00000237289 ETDCA0A1B0GVM5 59 aa7.21□□□□□ -1.25
TNFAIP3-201ENST00000237289 M0R378 163 aa7.21□□□□□ -1.25
TNFAIP3-201ENST00000237289 TMEM126AQ9H061 195 aa7.21□□□□□ -1.25
TNFAIP3-201ENST00000237289 DNAL4O96015 105 aa7.21□□□□□ -1.25
TNFAIP3-201ENST00000237289 C9orf153Q5TBE3 101 aa7.21□□□□□ -1.26
TNFAIP3-201ENST00000237289 UBE2AP49459 152 aa7.21□□□□□ -1.26
TNFAIP3-201ENST00000237289 MT-ATP8P03928 68 aa7.2□□□□□ -1.26
TNFAIP3-201ENST00000237289 KRTAP10-2P60368 255 aa7.2□□□□□ -1.26
TNFAIP3-201ENST00000237289 ADAMTSL4-AS1Q5T5F5 129 aa7.2□□□□□ -1.26
TNFAIP3-201ENST00000237289 IGKV2-28A0A075B6P5 120 aa7.19□□□□□ -1.26
TNFAIP3-201ENST00000237289 IGKV2D-28P01615 120 aa7.19□□□□□ -1.26
TNFAIP3-201ENST00000237289 SLPIP03973 132 aa7.19□□□□□ -1.26
TNFAIP3-201ENST00000237289 TLX1NBP0CAT3 122 aa7.19□□□□□ -1.26
TNFAIP3-201ENST00000237289 A0A087WYN8 130 aa7.19□□□□□ -1.26
TNFAIP3-201ENST00000237289 RPL37AP8A6NKH3 93 aa7.19□□□□□ -1.26
TNFAIP3-201ENST00000237289 MRPL55Q7Z7F7 128 aaKnown RBP7.19□□□□□ -1.26
TNFAIP3-201ENST00000237289 C22orf24Q9Y442 160 aa7.19□□□□□ -1.26
TNFAIP3-201ENST00000237289 SDIM1Q6ZPB5 146 aa7.18□□□□□ -1.26
TNFAIP3-201ENST00000237289 PRO1854Q9UHT4 67 aa7.17□□□□□ -1.26
TNFAIP3-201ENST00000237289 HIST1H4AP62805 103 aaKnown RBP7.16□□□□□ -1.26
TNFAIP3-201ENST00000237289 PRR3P79522 188 aaKnown RBP7.16□□□□□ -1.26
TNFAIP3-201ENST00000237289 ATXN8Q156A1 80 aa7.16□□□□□ -1.26
TNFAIP3-201ENST00000237289 FAM19A1Q7Z5A9 133 aa7.16□□□□□ -1.26
TNFAIP3-201ENST00000237289 FAM229AH3BQW9 127 aa7.16□□□□□ -1.26
TNFAIP3-201ENST00000237289 NDUFC2O95298 119 aa7.16□□□□□ -1.26
TNFAIP3-201ENST00000237289 HAMPP81172 84 aa7.15□□□□□ -1.26
TNFAIP3-201ENST00000237289 DIRC1Q969H9 104 aa7.15□□□□□ -1.26
TNFAIP3-201ENST00000237289 GAGE2AQ6NT46 116 aa7.14□□□□□ -1.27
TNFAIP3-201ENST00000237289 PHF5AQ7RTV0 110 aaKnown RBP7.14□□□□□ -1.27
TNFAIP3-201ENST00000237289 FAM168BA1KXE4 195 aa7.14□□□□□ -1.27
TNFAIP3-201ENST00000237289 C2orf91Q6ZV80 131 aa7.14□□□□□ -1.27
TNFAIP3-201ENST00000237289 TRBV10-2A0A0K0K1G8 114 aa7.14□□□□□ -1.27
TNFAIP3-201ENST00000237289 C1orf137Q5JT78 98 aa7.13□□□□□ -1.27
TNFAIP3-201ENST00000237289 ANKRD29Q8N6D5 301 aa7.13□□□□□ -1.27
TNFAIP3-201ENST00000237289 TRAV23DV6A0A075B6W5 121 aa7.13□□□□□ -1.27
TNFAIP3-201ENST00000237289 C9orf129Q5T035 196 aaKnown RBP7.13□□□□□ -1.27
TNFAIP3-201ENST00000237289 TEN1Q86WV5 123 aa7.13□□□□□ -1.27
TNFAIP3-201ENST00000237289 LINC00167Q96N53 147 aa7.13□□□□□ -1.27
TNFAIP3-201ENST00000237289 TRBV10-3A0A0K0K1G6 114 aa7.13□□□□□ -1.27
TNFAIP3-201ENST00000237289 GHRHP01286 108 aa7.13□□□□□ -1.27
TNFAIP3-201ENST00000237289 KRTAP10-1P60331 282 aa7.13□□□□□ -1.27
TNFAIP3-201ENST00000237289 HIGD2AQ9BW72 106 aa7.13□□□□□ -1.27
TNFAIP3-201ENST00000237289 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.13□□□□□ -1.27
TNFAIP3-201ENST00000237289 CFC1BP0CG36 223 aa7.12□□□□□ -1.27
TNFAIP3-201ENST00000237289 CFC1P0CG37 223 aa7.12□□□□□ -1.27
TNFAIP3-201ENST00000237289 SMR3BP02814 79 aaPredicted RBP7.11□□□□□ -1.27
TNFAIP3-201ENST00000237289 REG3GQ6UW15 175 aa7.11□□□□□ -1.27
TNFAIP3-201ENST00000237289 SERTAD4-AS1Q5TG53 156 aa7.11□□□□□ -1.27
TNFAIP3-201ENST00000237289 A0A1W2PNN7 141 aa7.11□□□□□ -1.27
TNFAIP3-201ENST00000237289 SCXQ7RTU7 201 aa7.11□□□□□ -1.27
TNFAIP3-201ENST00000237289 COX7BP24311 80 aa7.11□□□□□ -1.27
TNFAIP3-201ENST00000237289 SOSTDC1Q6X4U4 206 aa7.1□□□□□ -1.27
TNFAIP3-201ENST00000237289 SPACA4Q8TDM5 124 aa7.1□□□□□ -1.27
TNFAIP3-201ENST00000237289 A0A0B4J2C4 111 aa7.1□□□□□ -1.27
TNFAIP3-201ENST00000237289 VPREB1P12018 145 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms