RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 K7ERJ3 54 aa3.76□□□□□ -1.81
AFP-201ENST00000226359 NDUFV3P56181 108 aaKnown RBP3.76□□□□□ -1.81
AFP-201ENST00000226359 C5orf47Q569G3 176 aa3.76□□□□□ -1.81
AFP-201ENST00000226359 KRTAP5-11Q6L8G4 156 aa3.76□□□□□ -1.81
AFP-201ENST00000226359 SMIM29Q86T20 159 aa3.76□□□□□ -1.81
AFP-201ENST00000226359 CEND1Q8N111 149 aa3.76□□□□□ -1.81
AFP-201ENST00000226359 PPDPFQ9H3Y8 114 aa3.76□□□□□ -1.81
AFP-201ENST00000226359 SPANXA1Q9NS26 97 aa3.76□□□□□ -1.81
AFP-201ENST00000226359 IGLV4-3A0A075B6K6 122 aa3.75□□□□□ -1.81
AFP-201ENST00000226359 LRCOL1A6NCL2 159 aa3.75□□□□□ -1.81
AFP-201ENST00000226359 KRTAP29-1A8MX34 341 aaPredicted RBP3.75□□□□□ -1.81
AFP-201ENST00000226359 LECT2O14960 151 aa3.75□□□□□ -1.81
AFP-201ENST00000226359 TMEM170BQ5T4T1 132 aa3.75□□□□□ -1.81
AFP-201ENST00000226359 TMEM101Q96IK0 257 aa3.75□□□□□ -1.81
AFP-201ENST00000226359 OPRPNQ99935 248 aaPredicted RBP3.75□□□□□ -1.81
AFP-201ENST00000226359 NHP2Q9NX24 153 aaKnown RBP3.75□□□□□ -1.81
AFP-201ENST00000226359 RYR1P21817 5038 aa3.75□□□□□ -1.81
AFP-201ENST00000226359 PKHD1P08F94 4074 aa3.74□□□□□ -1.81
AFP-201ENST00000226359 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.74□□□□□ -1.81
AFP-201ENST00000226359 IGKV2D-26A0A0A0MRZ7 120 aa3.74□□□□□ -1.81
AFP-201ENST00000226359 C11orf86A6NJI1 115 aa3.74□□□□□ -1.81
AFP-201ENST00000226359 EPM2AB3EWF7 344 aa3.74□□□□□ -1.81
AFP-201ENST00000226359 KRTAP10-7P60409 375 aaPredicted RBP3.74□□□□□ -1.81
AFP-201ENST00000226359 TAL2Q16559 108 aa3.74□□□□□ -1.81
AFP-201ENST00000226359 UBE2D4Q9Y2X8 147 aa3.74□□□□□ -1.81
AFP-201ENST00000226359 PKD1P98161 4303 aa3.74□□□□□ -1.81
AFP-201ENST00000226359 LRP1BQ9NZR2 4599 aa3.74□□□□□ -1.81
AFP-201ENST00000226359 IGLV4-69A0A075B6H9 119 aa3.74□□□□□ -1.81
AFP-201ENST00000226359 TRAV8-4A0A0B4J246 113 aa3.74□□□□□ -1.81
AFP-201ENST00000226359 A0A1B0GWB2 263 aa3.74□□□□□ -1.81
AFP-201ENST00000226359 H7C423 109 aa3.74□□□□□ -1.81
AFP-201ENST00000226359 ETDBQ3ZM63 59 aa3.74□□□□□ -1.81
AFP-201ENST00000226359 CLPSL2Q6UWE3 100 aa3.74□□□□□ -1.81
AFP-201ENST00000226359 TIMM21Q9BVV7 248 aa3.74□□□□□ -1.81
AFP-201ENST00000226359 A0A0J9YXV3 536 aa3.73□□□□□ -1.81
AFP-201ENST00000226359 MYMXA0A1B0GTQ4 84 aa3.73□□□□□ -1.81
AFP-201ENST00000226359 H3BMG7 143 aa3.73□□□□□ -1.81
AFP-201ENST00000226359 APOMO95445 188 aa3.73□□□□□ -1.81
AFP-201ENST00000226359 SPINK8P0C7L1 97 aa3.73□□□□□ -1.81
AFP-201ENST00000226359 FUSP35637 526 aaKnown RBP eCLIP3.73□□□□□ -1.81
AFP-201ENST00000226359 KRTAP10-1P60331 282 aa3.73□□□□□ -1.81
AFP-201ENST00000226359 MRPS36P82909 103 aaKnown RBP3.73□□□□□ -1.81
AFP-201ENST00000226359 REG3AQ06141 175 aa3.73□□□□□ -1.81
AFP-201ENST00000226359 ADAMTSL4-AS1Q5T5F5 129 aa3.73□□□□□ -1.81
AFP-201ENST00000226359 LINC00269Q8N2A0 174 aa3.73□□□□□ -1.81
AFP-201ENST00000226359 AMELXQ99217 191 aa3.73□□□□□ -1.81
AFP-201ENST00000226359 PRO0461Q9UI25 63 aa3.73□□□□□ -1.81
AFP-201ENST00000226359 ERG28Q9UKR5 140 aa3.73□□□□□ -1.81
AFP-201ENST00000226359 PKIGQ9Y2B9 76 aa3.73□□□□□ -1.81
AFP-201ENST00000226359 A0A1B0GUV1 79 aa3.72□□□□□ -1.81
AFP-201ENST00000226359 ZNF815PA8K554 130 aa3.72□□□□□ -1.81
AFP-201ENST00000226359 M0QXV9 152 aa3.72□□□□□ -1.81
AFP-201ENST00000226359 LEPROTO15243 131 aa3.72□□□□□ -1.81
AFP-201ENST00000226359 LGALS3P17931 250 aaKnown RBP3.72□□□□□ -1.81
AFP-201ENST00000226359 RNASE13Q5GAN3 156 aaKnown RBP3.72□□□□□ -1.81
AFP-201ENST00000226359 SCGB1D4Q6XE38 83 aa3.72□□□□□ -1.81
AFP-201ENST00000226359 NTM-AS1Q6ZSK4 140 aa3.72□□□□□ -1.81
AFP-201ENST00000226359 Q6ZUT4 128 aa3.72□□□□□ -1.81
AFP-201ENST00000226359 PLEKHB2Q96CS7 222 aa3.72□□□□□ -1.81
AFP-201ENST00000226359 TTTY13Q9BZ97 58 aa3.72□□□□□ -1.81
AFP-201ENST00000226359 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.72□□□□□ -1.81
AFP-201ENST00000226359 TINCRA0A1B0GVN0 87 aa3.72□□□□□ -1.81
AFP-201ENST00000226359 TMEM223A0PJW6 202 aa3.72□□□□□ -1.81
AFP-201ENST00000226359 IGKV2-30P06310 120 aa3.72□□□□□ -1.81
AFP-201ENST00000226359 ZNF22P17026 224 aaPredicted RBP3.72□□□□□ -1.81
AFP-201ENST00000226359 ENHOQ6UWT2 76 aa3.72□□□□□ -1.81
AFP-201ENST00000226359 HIST1H4GQ99525 98 aa3.72□□□□□ -1.81
AFP-201ENST00000226359 PRR34Q9NV39 138 aa3.72□□□□□ -1.81
AFP-201ENST00000226359 IGKV3OR2-268A0A0C4DH90 116 aa3.71□□□□□ -1.82
AFP-201ENST00000226359 RPL37AP8A6NKH3 93 aa3.71□□□□□ -1.82
AFP-201ENST00000226359 J3QQQ9 107 aa3.71□□□□□ -1.82
AFP-201ENST00000226359 MT-ATP8P03928 68 aa3.71□□□□□ -1.82
AFP-201ENST00000226359 Q5VSD8 79 aa3.71□□□□□ -1.82
AFP-201ENST00000226359 SS18L2Q9UHA2 77 aa3.71□□□□□ -1.82
AFP-201ENST00000226359 IGLV10-54A0A075B6I4 117 aa3.7□□□□□ -1.82
AFP-201ENST00000226359 IGHV3-64A0A075B6Q5 118 aa3.7□□□□□ -1.82
AFP-201ENST00000226359 UBE2D1P51668 147 aa3.7□□□□□ -1.82
AFP-201ENST00000226359 FAM104AQ969W3 186 aa3.7□□□□□ -1.82
AFP-201ENST00000226359 ANAPC13Q9BS18 74 aa3.7□□□□□ -1.82
AFP-201ENST00000226359 KIAA1109Q2LD37 5005 aa3.7□□□□□ -1.82
AFP-201ENST00000226359 TRAV13-1A0A0B4J241 112 aa3.7□□□□□ -1.82
AFP-201ENST00000226359 INAFM2P0DMQ5 153 aa3.7□□□□□ -1.82
AFP-201ENST00000226359 PSMB2P49721 201 aa3.7□□□□□ -1.82
AFP-201ENST00000226359 HERVK_113P63121 156 aa3.7□□□□□ -1.82
AFP-201ENST00000226359 SS18Q15532 418 aa3.7□□□□□ -1.82
AFP-201ENST00000226359 PPDPFLQ8WWR9 84 aa3.7□□□□□ -1.82
AFP-201ENST00000226359 CDC42SE2Q9NRR3 84 aa3.7□□□□□ -1.82
AFP-201ENST00000226359 IGLV4-60A0A075B6I1 120 aa3.69□□□□□ -1.82
AFP-201ENST00000226359 A0A087X002 238 aa3.69□□□□□ -1.82
AFP-201ENST00000226359 IGHV1-58A0A0C4DH39 117 aa3.69□□□□□ -1.82
AFP-201ENST00000226359 LYRM7Q5U5X0 104 aa3.69□□□□□ -1.82
AFP-201ENST00000226359 APOBP04114 4563 aaKnown RBP3.68□□□□□ -1.82
AFP-201ENST00000226359 TSPEAR-AS2P59090 65 aa3.68□□□□□ -1.82
AFP-201ENST00000226359 FAM19A3Q7Z5A8 133 aa3.68□□□□□ -1.82
AFP-201ENST00000226359 CARD19Q96LW7 228 aa3.68□□□□□ -1.82
AFP-201ENST00000226359 HSPG2P98160 4391 aa3.68□□□□□ -1.82
AFP-201ENST00000226359 SMR3BP02814 79 aaPredicted RBP3.68□□□□□ -1.82
AFP-201ENST00000226359 HAMPP81172 84 aa3.68□□□□□ -1.82
AFP-201ENST00000226359 Q6ZSA8 131 aa3.68□□□□□ -1.82
AFP-201ENST00000226359 CHCHD10Q8WYQ3 142 aaPredicted RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 222 ms