RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 LINC00337Q8N6G1 96 aa8.89□□□□□ -0.99
NME3-201ENST00000219302 URB1-AS1Q96HZ7 61 aa8.89□□□□□ -0.99
NME3-201ENST00000219302 TMEM218A2RU14 115 aa8.88□□□□□ -0.99
NME3-201ENST00000219302 FABP9Q0Z7S8 132 aa8.88□□□□□ -0.99
NME3-201ENST00000219302 COX19Q49B96 90 aa8.88□□□□□ -0.99
NME3-201ENST00000219302 C4orf48Q5BLP8 95 aa8.88□□□□□ -0.99
NME3-201ENST00000219302 DAND5Q8N907 189 aa8.88□□□□□ -0.99
NME3-201ENST00000219302 C11orf86A6NJI1 115 aa8.87□□□□□ -0.99
NME3-201ENST00000219302 CLLU1Q5K131 121 aa8.87□□□□□ -0.99
NME3-201ENST00000219302 SFTA2Q6UW10 78 aa8.87□□□□□ -0.99
NME3-201ENST00000219302 Q8NBF4 154 aa8.87□□□□□ -0.99
NME3-201ENST00000219302 S100PP25815 95 aa8.86□□□□□ -0.99
NME3-201ENST00000219302 LCE2DQ5TA82 110 aaPredicted RBP8.86□□□□□ -0.99
NME3-201ENST00000219302 ZNF706Q9Y5V0 76 aaPredicted RBP8.86□□□□□ -0.99
NME3-201ENST00000219302 LINC00614P0C842 121 aa8.85□□□□□ -0.99
NME3-201ENST00000219302 SPRR1AP35321 89 aa8.85□□□□□ -0.99
NME3-201ENST00000219302 LINC00158P58513 81 aa8.85□□□□□ -0.99
NME3-201ENST00000219302 SPINK1P00995 79 aa8.84□□□□□ -0.99
NME3-201ENST00000219302 LINC01547P58512 204 aaPredicted RBP8.84□□□□□ -0.99
NME3-201ENST00000219302 TMEM170BQ5T4T1 132 aa8.84□□□□□ -0.99
NME3-201ENST00000219302 UQCC3Q6UW78 93 aa8.84□□□□□ -0.99
NME3-201ENST00000219302 BAGE3Q86Y29 109 aa8.84□□□□□ -0.99
NME3-201ENST00000219302 SMCR5Q8TEV8 140 aa8.84□□□□□ -0.99
NME3-201ENST00000219302 KRTAP4-16G5E9R7 235 aaPredicted RBP8.83□□□□□ -1
NME3-201ENST00000219302 HBDP02042 147 aa8.83□□□□□ -1
NME3-201ENST00000219302 KCNQ1DNQ9H478 68 aa8.83□□□□□ -1
NME3-201ENST00000219302 A0A0U1RRA0 63 aa8.82□□□□□ -1
NME3-201ENST00000219302 PRYO14603 147 aa8.82□□□□□ -1
NME3-201ENST00000219302 PMCHL1Q16048 86 aa8.82□□□□□ -1
NME3-201ENST00000219302 LINC00483Q53H64 154 aa8.82□□□□□ -1
NME3-201ENST00000219302 C18orf32Q8TCD1 76 aa8.82□□□□□ -1
NME3-201ENST00000219302 SEC11CQ9BY50 192 aa8.82□□□□□ -1
NME3-201ENST00000219302 FSIP2Q5CZC0 6907 aa8.81□□□□□ -1
NME3-201ENST00000219302 SEC61BP60468 96 aaKnown RBP8.81□□□□□ -1
NME3-201ENST00000219302 TMEM223A0PJW6 202 aa8.79□□□□□ -1
NME3-201ENST00000219302 SMIM13P0DJ93 91 aa8.79□□□□□ -1
NME3-201ENST00000219302 BOD1L2Q8IYS8 172 aa8.79□□□□□ -1
NME3-201ENST00000219302 CHTOPQ9Y3Y2 248 aaKnown RBP8.78□□□□□ -1
NME3-201ENST00000219302 ETDCA0A1B0GVM5 59 aa8.77□□□□□ -1.01
NME3-201ENST00000219302 NCR3O14931 201 aa8.77□□□□□ -1.01
NME3-201ENST00000219302 RPS29P62273 56 aaKnown RBP8.77□□□□□ -1.01
NME3-201ENST00000219302 Q8N377 158 aa8.77□□□□□ -1.01
NME3-201ENST00000219302 TRBV10-3A0A0K0K1G6 114 aa8.76□□□□□ -1.01
NME3-201ENST00000219302 GAGE2AQ6NT46 116 aa8.76□□□□□ -1.01
NME3-201ENST00000219302 SSBP3-AS1Q7Z2R9 100 aa8.76□□□□□ -1.01
NME3-201ENST00000219302 MIR7-3HGQ8N6C7 128 aa8.76□□□□□ -1.01
NME3-201ENST00000219302 TRAPPC1Q9Y5R8 145 aa8.76□□□□□ -1.01
NME3-201ENST00000219302 ATP6V1G1O75348 118 aa8.75□□□□□ -1.01
NME3-201ENST00000219302 ERC2-IT1O76042 136 aa8.75□□□□□ -1.01
NME3-201ENST00000219302 C10orf91Q5T1B1 145 aa8.75□□□□□ -1.01
NME3-201ENST00000219302 XP32Q5T750 250 aa8.75□□□□□ -1.01
NME3-201ENST00000219302 LCE2CQ5TA81 110 aa8.75□□□□□ -1.01
NME3-201ENST00000219302 B5MCH6 92 aa8.74□□□□□ -1.01
NME3-201ENST00000219302 IFITM2Q01629 132 aa8.74□□□□□ -1.01
NME3-201ENST00000219302 MOBPQ13875 183 aa8.74□□□□□ -1.01
NME3-201ENST00000219302 RPS10P5Q9NQ39 176 aa8.74□□□□□ -1.01
NME3-201ENST00000219302 CRCT1Q9UGL9 99 aa8.74□□□□□ -1.01
NME3-201ENST00000219302 TRAV12-1A0A0B4J245 112 aa8.73□□□□□ -1.01
NME3-201ENST00000219302 RHEBQ15382 184 aa8.73□□□□□ -1.01
NME3-201ENST00000219302 MEIG1Q5JSS6 88 aa8.73□□□□□ -1.01
NME3-201ENST00000219302 NDUFA12Q9UI09 145 aa8.73□□□□□ -1.01
NME3-201ENST00000219302 IGLV9-49A0A0B4J1Y8 123 aa8.72□□□□□ -1.01
NME3-201ENST00000219302 SLC25A20O43772 301 aa8.72□□□□□ -1.01
NME3-201ENST00000219302 HERV-K104P63124 156 aa8.72□□□□□ -1.01
NME3-201ENST00000219302 FAM19A2Q8N3H0 131 aa8.72□□□□□ -1.01
NME3-201ENST00000219302 Q9BRP9 147 aa8.71□□□□□ -1.02
NME3-201ENST00000219302 LOC107984156A0A0G2JMH3 177 aa8.7□□□□□ -1.02
NME3-201ENST00000219302 LINC00587B1AMM8 73 aa8.7□□□□□ -1.02
NME3-201ENST00000219302 ARL17AQ8IVW1 177 aa8.7□□□□□ -1.02
NME3-201ENST00000219302 IFI27L1Q96BM0 104 aa8.7□□□□□ -1.02
NME3-201ENST00000219302 KRTAP19-2Q3LHN2 52 aa8.69□□□□□ -1.02
NME3-201ENST00000219302 TRBV10-2A0A0K0K1G8 114 aa8.67□□□□□ -1.02
NME3-201ENST00000219302 MYMXA0A1B0GTQ4 84 aa8.67□□□□□ -1.02
NME3-201ENST00000219302 S100A12P80511 92 aa8.67□□□□□ -1.02
NME3-201ENST00000219302 Q6ZRX8 168 aa8.67□□□□□ -1.02
NME3-201ENST00000219302 COMMD7Q86VX2 200 aa8.67□□□□□ -1.02
NME3-201ENST00000219302 DDTP30046 118 aa8.66□□□□□ -1.02
NME3-201ENST00000219302 CHCHD1Q96BP2 118 aaKnown RBP8.66□□□□□ -1.02
NME3-201ENST00000219302 MAP1LC3CQ9BXW4 147 aa8.66□□□□□ -1.02
NME3-201ENST00000219302 TSPEAR-AS2P59090 65 aa8.64□□□□□ -1.03
NME3-201ENST00000219302 IGLV6-57P01721 117 aa8.63□□□□□ -1.03
NME3-201ENST00000219302 MT1HP80294 61 aa8.62□□□□□ -1.03
NME3-201ENST00000219302 SPANXB1Q9NS25 103 aaPredicted RBP8.61□□□□□ -1.03
NME3-201ENST00000219302 LEPROTO15243 131 aa8.6□□□□□ -1.03
NME3-201ENST00000219302 NDUFC2O95298 119 aa8.6□□□□□ -1.03
NME3-201ENST00000219302 JOSD1Q15040 202 aaPredicted RBP8.59□□□□□ -1.03
NME3-201ENST00000219302 C9orf153Q5TBE3 101 aa8.59□□□□□ -1.03
NME3-201ENST00000219302 ST20-AS1Q8NBB2 130 aa8.59□□□□□ -1.03
NME3-201ENST00000219302 YPEL4Q96NS1 127 aa8.59□□□□□ -1.03
NME3-201ENST00000219302 PCOTHQ58A44 107 aa8.58□□□□□ -1.04
NME3-201ENST00000219302 TRAV23DV6A0A075B6W5 121 aa8.57□□□□□ -1.04
NME3-201ENST00000219302 C5orf52A6NGY3 159 aa8.57□□□□□ -1.04
NME3-201ENST00000219302 S100A7L2Q5SY68 101 aa8.57□□□□□ -1.04
NME3-201ENST00000219302 J3QQQ9 107 aa8.56□□□□□ -1.04
NME3-201ENST00000219302 ZNF73O43830 326 aaPredicted RBP8.56□□□□□ -1.04
NME3-201ENST00000219302 EIF4EBP3O60516 100 aaPredicted RBP8.56□□□□□ -1.04
NME3-201ENST00000219302 APOC3P02656 99 aa8.56□□□□□ -1.04
NME3-201ENST00000219302 IGLV8-61A0A075B6I0 122 aa8.55□□□□□ -1.04
NME3-201ENST00000219302 H0Y8G0 127 aa8.55□□□□□ -1.04
NME3-201ENST00000219302 HSBP1O75506 76 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms