RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 NIPBLQ6KC79 2804 aaeCLIP6.73□□□□□ -1.33
CSTF1-201ENST00000217109 STAB1Q9NY15 2570 aa6.73□□□□□ -1.33
CSTF1-201ENST00000217109 KRTAP10-3P60369 221 aa6.73□□□□□ -1.33
CSTF1-201ENST00000217109 NBEAL1Q6ZS30 2694 aa6.73□□□□□ -1.33
CSTF1-201ENST00000217109 CSMD2Q7Z408 3487 aa6.73□□□□□ -1.33
CSTF1-201ENST00000217109 NANOS2P60321 138 aaKnown RBP6.73□□□□□ -1.33
CSTF1-201ENST00000217109 KRTAP1-1Q07627 177 aa6.73□□□□□ -1.33
CSTF1-201ENST00000217109 C10orf25Q5T742 122 aa6.73□□□□□ -1.33
CSTF1-201ENST00000217109 SCXQ7RTU7 201 aa6.73□□□□□ -1.33
CSTF1-201ENST00000217109 WFDC10BQ8IUB3 73 aa6.73□□□□□ -1.33
CSTF1-201ENST00000217109 IMUPQ9GZP8 106 aa6.73□□□□□ -1.33
CSTF1-201ENST00000217109 LINC00846Q9NV44 126 aa6.73□□□□□ -1.33
CSTF1-201ENST00000217109 TRBV10-3A0A0K0K1G6 114 aa6.72□□□□□ -1.33
CSTF1-201ENST00000217109 COL6A5A8TX70 2615 aa6.72□□□□□ -1.33
CSTF1-201ENST00000217109 SPATA3Q8NHX4 192 aa6.71□□□□□ -1.34
CSTF1-201ENST00000217109 A0A0J9YWU9 116 aa6.71□□□□□ -1.34
CSTF1-201ENST00000217109 UQCRQO14949 82 aa6.7□□□□□ -1.34
CSTF1-201ENST00000217109 LYPD5Q6UWN5 251 aa6.7□□□□□ -1.34
CSTF1-201ENST00000217109 ETDCA0A1B0GVM5 59 aa6.7□□□□□ -1.34
CSTF1-201ENST00000217109 UPK3BQ9BT76 320 aa6.7□□□□□ -1.34
CSTF1-201ENST00000217109 KLK5Q9Y337 293 aaPredicted RBP6.7□□□□□ -1.34
CSTF1-201ENST00000217109 USP17L23D6RBM5 183 aa6.7□□□□□ -1.34
CSTF1-201ENST00000217109 UBE2BP63146 152 aa6.7□□□□□ -1.34
CSTF1-201ENST00000217109 FAM19A3Q7Z5A8 133 aa6.7□□□□□ -1.34
CSTF1-201ENST00000217109 C3orf22Q8N5N4 141 aa6.7□□□□□ -1.34
CSTF1-201ENST00000217109 ZNF73O43830 326 aaPredicted RBP6.69□□□□□ -1.34
CSTF1-201ENST00000217109 SYCNQ0VAF6 134 aa6.69□□□□□ -1.34
CSTF1-201ENST00000217109 CCKP06307 115 aa6.68□□□□□ -1.34
CSTF1-201ENST00000217109 NDUFC2O95298 119 aa6.67□□□□□ -1.34
CSTF1-201ENST00000217109 SMCR5Q8TEV8 140 aa6.67□□□□□ -1.34
CSTF1-201ENST00000217109 F8WEM9 126 aa6.67□□□□□ -1.34
CSTF1-201ENST00000217109 NREPQ16612 68 aa6.67□□□□□ -1.34
CSTF1-201ENST00000217109 C20orf197Q8N268 126 aa6.67□□□□□ -1.34
CSTF1-201ENST00000217109 Q8NAQ8 132 aa6.67□□□□□ -1.34
CSTF1-201ENST00000217109 TRBV7-7A0A0K0K1E9 115 aa6.67□□□□□ -1.34
CSTF1-201ENST00000217109 IGKV2-24A0A0C4DH68 120 aa6.67□□□□□ -1.34
CSTF1-201ENST00000217109 RMI2Q96E14 147 aa6.67□□□□□ -1.34
CSTF1-201ENST00000217109 RPL37AP8A6NKH3 93 aa6.66□□□□□ -1.34
CSTF1-201ENST00000217109 C9orf129Q5T035 196 aaKnown RBP6.66□□□□□ -1.34
CSTF1-201ENST00000217109 LINC00575Q6W349 94 aa6.65□□□□□ -1.34
CSTF1-201ENST00000217109 HIVEP1P15822 2718 aa6.65□□□□□ -1.34
CSTF1-201ENST00000217109 COX7CP15954 63 aa6.65□□□□□ -1.34
CSTF1-201ENST00000217109 Q6JHZ5 121 aa6.65□□□□□ -1.34
CSTF1-201ENST00000217109 FAM19A1Q7Z5A9 133 aa6.65□□□□□ -1.34
CSTF1-201ENST00000217109 NHLRC4P0CG21 123 aaPredicted RBP6.65□□□□□ -1.35
CSTF1-201ENST00000217109 Q6ZRU5 148 aa6.65□□□□□ -1.35
CSTF1-201ENST00000217109 M0R378 163 aa6.64□□□□□ -1.35
CSTF1-201ENST00000217109 C3orf84H3BNL1 204 aa6.64□□□□□ -1.35
CSTF1-201ENST00000217109 LINC01561Q8N1V8 128 aa6.64□□□□□ -1.35
CSTF1-201ENST00000217109 PDE6GP18545 87 aa6.64□□□□□ -1.35
CSTF1-201ENST00000217109 FUSP35637 526 aaKnown RBP eCLIP6.64□□□□□ -1.35
CSTF1-201ENST00000217109 C6orf48Q9UBA6 75 aa6.64□□□□□ -1.35
CSTF1-201ENST00000217109 FAM19A5Q7Z5A7 132 aaPredicted RBP6.64□□□□□ -1.35
CSTF1-201ENST00000217109 KIAA0087Q14695 138 aa6.63□□□□□ -1.35
CSTF1-201ENST00000217109 SERP2Q8N6R1 65 aa6.63□□□□□ -1.35
CSTF1-201ENST00000217109 EGFEM1PQ0D2K5 195 aa6.63□□□□□ -1.35
CSTF1-201ENST00000217109 ESRGQ1W209 222 aa6.62□□□□□ -1.35
CSTF1-201ENST00000217109 LINC00612Q8N6U2 182 aa6.62□□□□□ -1.35
CSTF1-201ENST00000217109 NSD1Q96L73 2696 aaPredicted RBP6.62□□□□□ -1.35
CSTF1-201ENST00000217109 H3BQ85 93 aa6.62□□□□□ -1.35
CSTF1-201ENST00000217109 ATP5EP2Q5VTU8 51 aa6.61□□□□□ -1.35
CSTF1-201ENST00000217109 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.61□□□□□ -1.35
CSTF1-201ENST00000217109 NDUFC2-KCTD14E9PQ53 114 aa6.61□□□□□ -1.35
CSTF1-201ENST00000217109 VPS13CQ709C8 3753 aa6.61□□□□□ -1.35
CSTF1-201ENST00000217109 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.6□□□□□ -1.35
CSTF1-201ENST00000217109 MUC7Q8TAX7 377 aa6.6□□□□□ -1.35
CSTF1-201ENST00000217109 HIGD2AQ9BW72 106 aa6.6□□□□□ -1.35
CSTF1-201ENST00000217109 BPY2O14599 106 aa6.6□□□□□ -1.35
CSTF1-201ENST00000217109 TRAV10A0A0B4J240 114 aa6.59□□□□□ -1.35
CSTF1-201ENST00000217109 J3KT08 172 aa6.59□□□□□ -1.35
CSTF1-201ENST00000217109 SNURFQ9Y675 71 aa6.58□□□□□ -1.36
CSTF1-201ENST00000217109 A0A096LNI7 61 aa6.57□□□□□ -1.36
CSTF1-201ENST00000217109 Q6ZVQ6 151 aa6.57□□□□□ -1.36
CSTF1-201ENST00000217109 PPDPFQ9H3Y8 114 aa6.56□□□□□ -1.36
CSTF1-201ENST00000217109 KRTAP24-1Q3LI83 254 aa6.56□□□□□ -1.36
CSTF1-201ENST00000217109 BAHCC1Q9P281 2608 aa6.55□□□□□ -1.36
CSTF1-201ENST00000217109 LINC01547P58512 204 aaPredicted RBP6.55□□□□□ -1.36
CSTF1-201ENST00000217109 Q8N9L7 120 aa6.54□□□□□ -1.36
CSTF1-201ENST00000217109 LINC01600Q96MT4 127 aa6.54□□□□□ -1.36
CSTF1-201ENST00000217109 TENM4Q6N022 2769 aa6.54□□□□□ -1.36
CSTF1-201ENST00000217109 PRR34Q9NV39 138 aa6.54□□□□□ -1.36
CSTF1-201ENST00000217109 ZFHX3Q15911 3703 aa6.54□□□□□ -1.36
CSTF1-201ENST00000217109 LOC107984640A0A0U1RRK4 108 aa6.54□□□□□ -1.36
CSTF1-201ENST00000217109 C2orf48Q96LS8 159 aa6.54□□□□□ -1.36
CSTF1-201ENST00000217109 VWFP04275 2813 aa6.54□□□□□ -1.36
CSTF1-201ENST00000217109 KRTAP10-11P60412 298 aa6.53□□□□□ -1.36
CSTF1-201ENST00000217109 IGLV6-57P01721 117 aa6.53□□□□□ -1.36
CSTF1-201ENST00000217109 LINC01556Q5JQF7 62 aa6.53□□□□□ -1.36
CSTF1-201ENST00000217109 Q6ZQT0 140 aa6.53□□□□□ -1.36
CSTF1-201ENST00000217109 Q6ZRP5 223 aa6.53□□□□□ -1.36
CSTF1-201ENST00000217109 C7orf33Q8WU49 177 aa6.52□□□□□ -1.37
CSTF1-201ENST00000217109 UBE2AP49459 152 aa6.51□□□□□ -1.37
CSTF1-201ENST00000217109 Q8NDZ9 215 aa6.51□□□□□ -1.37
CSTF1-201ENST00000217109 DHRS4-AS1Q9P1J3 65 aa6.51□□□□□ -1.37
CSTF1-201ENST00000217109 VPREB1P12018 145 aa6.51□□□□□ -1.37
CSTF1-201ENST00000217109 TMEM258P61165 79 aa6.51□□□□□ -1.37
CSTF1-201ENST00000217109 TENM1Q9UKZ4 2725 aa6.51□□□□□ -1.37
CSTF1-201ENST00000217109 NBPF19A0A087WUL8 3843 aa6.5□□□□□ -1.37
CSTF1-201ENST00000217109 FAM236DA0A1B0GTK5 79 aa6.5□□□□□ -1.37
CSTF1-201ENST00000217109 FAM236CP0DP71 79 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 198.2 ms