RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 SPACA4Q8TDM5 124 aa9.5□□□□□ -0.89
SIX4-201ENST00000216513 F8WDY8 70 aa9.49□□□□□ -0.89
SIX4-201ENST00000216513 CNFNQ9BYD5 112 aa9.49□□□□□ -0.89
SIX4-201ENST00000216513 Q8N9L7 120 aa9.49□□□□□ -0.89
SIX4-201ENST00000216513 A0A096LNJ9 63 aa9.49□□□□□ -0.89
SIX4-201ENST00000216513 ATP5EP2Q5VTU8 51 aa9.48□□□□□ -0.89
SIX4-201ENST00000216513 A6NED7 52 aa9.48□□□□□ -0.89
SIX4-201ENST00000216513 TIMM17BO60830 172 aa9.48□□□□□ -0.89
SIX4-201ENST00000216513 IGHV6-1A0A0B4J1U7 121 aa9.47□□□□□ -0.89
SIX4-201ENST00000216513 CELSR3Q9NYQ7 3312 aa9.47□□□□□ -0.89
SIX4-201ENST00000216513 DNAH10OSP0CZ25 163 aa9.47□□□□□ -0.89
SIX4-201ENST00000216513 PHF5AQ7RTV0 110 aaKnown RBP9.47□□□□□ -0.89
SIX4-201ENST00000216513 LIMD2Q9BT23 127 aa9.46□□□□□ -0.89
SIX4-201ENST00000216513 Q6ZVQ6 151 aa9.46□□□□□ -0.89
SIX4-201ENST00000216513 MGAM2Q2M2H8 2515 aa9.46□□□□□ -0.89
SIX4-201ENST00000216513 FAM240AA0A1B0GVK7 77 aa9.46□□□□□ -0.89
SIX4-201ENST00000216513 C19orf73Q9NVV2 129 aa9.46□□□□□ -0.9
SIX4-201ENST00000216513 SPINK1P00995 79 aa9.46□□□□□ -0.9
SIX4-201ENST00000216513 SERP1Q9Y6X1 66 aa9.46□□□□□ -0.9
SIX4-201ENST00000216513 CFAP54Q96N23 3096 aa9.46□□□□□ -0.9
SIX4-201ENST00000216513 CSDC2Q9Y534 153 aaKnown RBP9.45□□□□□ -0.9
SIX4-201ENST00000216513 PCOTHQ58A44 107 aa9.45□□□□□ -0.9
SIX4-201ENST00000216513 Q6ZRP5 223 aa9.45□□□□□ -0.9
SIX4-201ENST00000216513 SOSTDC1Q6X4U4 206 aa9.44□□□□□ -0.9
SIX4-201ENST00000216513 SERP2Q8N6R1 65 aa9.44□□□□□ -0.9
SIX4-201ENST00000216513 PRYO14603 147 aa9.44□□□□□ -0.9
SIX4-201ENST00000216513 TYMSOSQ8TAI1 123 aa9.44□□□□□ -0.9
SIX4-201ENST00000216513 PRR15LQ9BU68 103 aa9.44□□□□□ -0.9
SIX4-201ENST00000216513 CHD7Q9P2D1 2997 aa9.44□□□□□ -0.9
SIX4-201ENST00000216513 NTM-AS1Q6ZSK4 140 aa9.44□□□□□ -0.9
SIX4-201ENST00000216513 SMCR5Q8TEV8 140 aa9.44□□□□□ -0.9
SIX4-201ENST00000216513 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.43□□□□□ -0.9
SIX4-201ENST00000216513 LINC00208Q96KT6 92 aa9.42□□□□□ -0.9
SIX4-201ENST00000216513 Q8N814 137 aa9.42□□□□□ -0.9
SIX4-201ENST00000216513 HTTP42858 3142 aa9.42□□□□□ -0.9
SIX4-201ENST00000216513 TM2D3Q9BRN9 247 aa9.41□□□□□ -0.9
SIX4-201ENST00000216513 A0A0C4DFX4 3053 aa9.4□□□□□ -0.9
SIX4-201ENST00000216513 MOBPQ13875 183 aa9.4□□□□□ -0.9
SIX4-201ENST00000216513 LINC01547P58512 204 aaPredicted RBP9.4□□□□□ -0.91
SIX4-201ENST00000216513 LINC00336Q6ZUF6 198 aa9.39□□□□□ -0.91
SIX4-201ENST00000216513 KIF25-AS1Q9Y6Z4 181 aa9.39□□□□□ -0.91
SIX4-201ENST00000216513 CRYGAP11844 174 aa9.39□□□□□ -0.91
SIX4-201ENST00000216513 AMELXQ99217 191 aa9.38□□□□□ -0.91
SIX4-201ENST00000216513 LINC00167Q96N53 147 aa9.37□□□□□ -0.91
SIX4-201ENST00000216513 LINC00575Q6W349 94 aa9.37□□□□□ -0.91
SIX4-201ENST00000216513 A0A087WSZ3 146 aa9.36□□□□□ -0.91
SIX4-201ENST00000216513 COX7CP15954 63 aa9.36□□□□□ -0.91
SIX4-201ENST00000216513 Q6JHZ5 121 aa9.36□□□□□ -0.91
SIX4-201ENST00000216513 CFAP46Q8IYW2 2715 aa9.36□□□□□ -0.91
SIX4-201ENST00000216513 USP24Q9UPU5 2620 aa9.35□□□□□ -0.91
SIX4-201ENST00000216513 FAM19A4Q96LR4 140 aa9.35□□□□□ -0.91
SIX4-201ENST00000216513 COX8CQ7Z4L0 72 aa9.35□□□□□ -0.91
SIX4-201ENST00000216513 C6orf48Q9UBA6 75 aa9.35□□□□□ -0.91
SIX4-201ENST00000216513 TRBV7-6A0A0J9YX20 115 aa9.34□□□□□ -0.91
SIX4-201ENST00000216513 BPTFQ12830 3046 aa9.33□□□□□ -0.92
SIX4-201ENST00000216513 CASC10Q5T4H9 136 aa9.33□□□□□ -0.92
SIX4-201ENST00000216513 NDUFC1O43677 76 aa9.33□□□□□ -0.92
SIX4-201ENST00000216513 LINC01561Q8N1V8 128 aa9.32□□□□□ -0.92
SIX4-201ENST00000216513 ITPR3Q14573 2671 aa9.31□□□□□ -0.92
SIX4-201ENST00000216513 V9GYY9 64 aa9.31□□□□□ -0.92
SIX4-201ENST00000216513 IMUPQ9GZP8 106 aa9.3□□□□□ -0.92
SIX4-201ENST00000216513 A0A087WTM6 91 aa9.3□□□□□ -0.92
SIX4-201ENST00000216513 CSNK1G2-AS1Q8NCQ2 148 aa9.3□□□□□ -0.92
SIX4-201ENST00000216513 FLNAP21333 2647 aaKnown RBP9.3□□□□□ -0.92
SIX4-201ENST00000216513 PSPHP1O15172 72 aa9.3□□□□□ -0.92
SIX4-201ENST00000216513 EPM2AB3EWF7 344 aa9.29□□□□□ -0.92
SIX4-201ENST00000216513 BAHCC1Q9P281 2608 aa9.29□□□□□ -0.92
SIX4-201ENST00000216513 LINC00476Q8WZB0 136 aa9.29□□□□□ -0.92
SIX4-201ENST00000216513 APLNQ9ULZ1 77 aa9.29□□□□□ -0.92
SIX4-201ENST00000216513 TRIOO75962 3097 aa9.28□□□□□ -0.92
SIX4-201ENST00000216513 COX6B2Q6YFQ2 88 aa9.28□□□□□ -0.92
SIX4-201ENST00000216513 LINC00846Q9NV44 126 aa9.27□□□□□ -0.93
SIX4-201ENST00000216513 ATP5EP56381 51 aaPredicted RBP9.27□□□□□ -0.93
SIX4-201ENST00000216513 IGHV3OR16-9A0A0B4J2B5 98 aa9.27□□□□□ -0.93
SIX4-201ENST00000216513 MAST4O15021 2626 aa9.27□□□□□ -0.93
SIX4-201ENST00000216513 KIAA0087Q14695 138 aa9.26□□□□□ -0.93
SIX4-201ENST00000216513 TRAV7A0A075B6U4 112 aa9.26□□□□□ -0.93
SIX4-201ENST00000216513 FAM218AQ96MZ4 157 aa9.26□□□□□ -0.93
SIX4-201ENST00000216513 FAM168BA1KXE4 195 aa9.26□□□□□ -0.93
SIX4-201ENST00000216513 CDIP1Q9H305 208 aa9.26□□□□□ -0.93
SIX4-201ENST00000216513 H0Y9P7 68 aa9.25□□□□□ -0.93
SIX4-201ENST00000216513 FREM2Q5SZK8 3169 aa9.24□□□□□ -0.93
SIX4-201ENST00000216513 HCG22E2RYF7 251 aa9.24□□□□□ -0.93
SIX4-201ENST00000216513 IGKV2D-30A0A075B6S6 120 aa9.24□□□□□ -0.93
SIX4-201ENST00000216513 IGKV2-30P06310 120 aa9.24□□□□□ -0.93
SIX4-201ENST00000216513 ST20-AS1Q8NBB2 130 aa9.23□□□□□ -0.93
SIX4-201ENST00000216513 GVQW2A0A096LPI5 108 aaPredicted RBP9.23□□□□□ -0.93
SIX4-201ENST00000216513 ATRQ13535 2644 aa9.22□□□□□ -0.93
SIX4-201ENST00000216513 TRBV7-7A0A0K0K1E9 115 aa9.22□□□□□ -0.93
SIX4-201ENST00000216513 LINC00528Q8N1L1 170 aa9.21□□□□□ -0.93
SIX4-201ENST00000216513 BCE1O60756 84 aa9.21□□□□□ -0.94
SIX4-201ENST00000216513 VCANP13611 3396 aa9.21□□□□□ -0.94
SIX4-201ENST00000216513 CHD9Q3L8U1 2897 aa9.2□□□□□ -0.94
SIX4-201ENST00000216513 SETXQ7Z333 2677 aaKnown RBP9.2□□□□□ -0.94
SIX4-201ENST00000216513 A0A0G2JQZ4 141 aa9.2□□□□□ -0.94
SIX4-201ENST00000216513 A0A1W2PNN7 141 aa9.2□□□□□ -0.94
SIX4-201ENST00000216513 PMAIP1Q13794 54 aa9.2□□□□□ -0.94
SIX4-201ENST00000216513 C1orf195Q5TG92 126 aa9.19□□□□□ -0.94
SIX4-201ENST00000216513 SMIM29Q86T20 159 aa9.19□□□□□ -0.94
SIX4-201ENST00000216513 GIG44P09565 113 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms