RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 LAMTOR3Q9UHA4 124 aa10.36□□□□□ -0.75
EFNB1-201ENST00000204961 HRCT1Q6UXD1 115 aa10.34□□□□□ -0.75
EFNB1-201ENST00000204961 SPAG11BQ08648 103 aa10.33□□□□□ -0.76
EFNB1-201ENST00000204961 J3KT08 172 aa10.33□□□□□ -0.76
EFNB1-201ENST00000204961 ORMDL1Q9P0S3 153 aa10.33□□□□□ -0.76
EFNB1-201ENST00000204961 TRAV23DV6A0A075B6W5 121 aa10.33□□□□□ -0.76
EFNB1-201ENST00000204961 CMC4P56277 68 aaPredicted RBP10.33□□□□□ -0.76
EFNB1-201ENST00000204961 C4orf26Q17RF5 130 aa10.33□□□□□ -0.76
EFNB1-201ENST00000204961 SCXQ7RTU7 201 aa10.33□□□□□ -0.76
EFNB1-201ENST00000204961 KMT2BQ9UMN6 2715 aaPredicted RBP10.32□□□□□ -0.76
EFNB1-201ENST00000204961 ATOX1O00244 68 aa10.32□□□□□ -0.76
EFNB1-201ENST00000204961 CSMD3Q7Z407 3707 aa10.32□□□□□ -0.76
EFNB1-201ENST00000204961 C5orf47Q569G3 176 aa10.32□□□□□ -0.76
EFNB1-201ENST00000204961 CYSRT1A8MQ03 144 aa10.31□□□□□ -0.76
EFNB1-201ENST00000204961 C2orf48Q96LS8 159 aa10.3□□□□□ -0.76
EFNB1-201ENST00000204961 USP17L23D6RBM5 183 aa10.29□□□□□ -0.76
EFNB1-201ENST00000204961 HAMPP81172 84 aa10.29□□□□□ -0.76
EFNB1-201ENST00000204961 FAM19A1Q7Z5A9 133 aa10.29□□□□□ -0.76
EFNB1-201ENST00000204961 TENM2Q9NT68 2774 aa10.29□□□□□ -0.76
EFNB1-201ENST00000204961 H0YGX0 51 aa10.29□□□□□ -0.76
EFNB1-201ENST00000204961 M0R2N4 97 aa10.28□□□□□ -0.76
EFNB1-201ENST00000204961 ENHOQ6UWT2 76 aa10.28□□□□□ -0.76
EFNB1-201ENST00000204961 CD164L2Q6UWJ8 174 aa10.27□□□□□ -0.76
EFNB1-201ENST00000204961 C16orf95Q9H693 158 aa10.27□□□□□ -0.76
EFNB1-201ENST00000204961 IGHV4-30-4P0DP06 118 aa10.27□□□□□ -0.77
EFNB1-201ENST00000204961 WFDC10BQ8IUB3 73 aa10.27□□□□□ -0.77
EFNB1-201ENST00000204961 LINC01561Q8N1V8 128 aa10.27□□□□□ -0.77
EFNB1-201ENST00000204961 NANOS2P60321 138 aaKnown RBP10.27□□□□□ -0.77
EFNB1-201ENST00000204961 FAM19A3Q7Z5A8 133 aa10.27□□□□□ -0.77
EFNB1-201ENST00000204961 Q8IZM0 81 aa10.27□□□□□ -0.77
EFNB1-201ENST00000204961 KIAA0087Q14695 138 aa10.26□□□□□ -0.77
EFNB1-201ENST00000204961 Q6ZQY7 126 aa10.25□□□□□ -0.77
EFNB1-201ENST00000204961 Q8N814 137 aa10.25□□□□□ -0.77
EFNB1-201ENST00000204961 DEFB105AQ8NG35 78 aa10.25□□□□□ -0.77
EFNB1-201ENST00000204961 GHRHP01286 108 aa10.23□□□□□ -0.77
EFNB1-201ENST00000204961 SERP2Q8N6R1 65 aa10.23□□□□□ -0.77
EFNB1-201ENST00000204961 SPART-AS1P0CW21 52 aa10.23□□□□□ -0.77
EFNB1-201ENST00000204961 CRYGAP11844 174 aa10.23□□□□□ -0.77
EFNB1-201ENST00000204961 C9orf66Q5T8R8 295 aa10.23□□□□□ -0.77
EFNB1-201ENST00000204961 C20orf197Q8N268 126 aa10.23□□□□□ -0.77
EFNB1-201ENST00000204961 MRAPQ8TCY5 172 aa10.23□□□□□ -0.77
EFNB1-201ENST00000204961 TRBV10-3A0A0K0K1G6 114 aa10.22□□□□□ -0.77
EFNB1-201ENST00000204961 ZNF561-AS1K7EIQ3 104 aa10.22□□□□□ -0.77
EFNB1-201ENST00000204961 IGKV2D-24A0A075B6R9 120 aa10.21□□□□□ -0.77
EFNB1-201ENST00000204961 STAB2Q8WWQ8 2551 aa10.21□□□□□ -0.78
EFNB1-201ENST00000204961 A0A1B0GUV1 79 aa10.21□□□□□ -0.78
EFNB1-201ENST00000204961 OXTP01178 125 aa10.21□□□□□ -0.78
EFNB1-201ENST00000204961 APOC4P55056 127 aa10.21□□□□□ -0.78
EFNB1-201ENST00000204961 Q6ZTC4 211 aa10.21□□□□□ -0.78
EFNB1-201ENST00000204961 CAMK2N2Q96S95 79 aa10.21□□□□□ -0.78
EFNB1-201ENST00000204961 Q6JHZ5 121 aa10.2□□□□□ -0.78
EFNB1-201ENST00000204961 DPH3Q96FX2 82 aa10.2□□□□□ -0.78
EFNB1-201ENST00000204961 PKIGQ9Y2B9 76 aa10.18□□□□□ -0.78
EFNB1-201ENST00000204961 Q8NAQ8 132 aa10.18□□□□□ -0.78
EFNB1-201ENST00000204961 LYRM9A8MSI8 78 aa10.18□□□□□ -0.78
EFNB1-201ENST00000204961 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.18□□□□□ -0.78
EFNB1-201ENST00000204961 KPRPQ5T749 579 aaPredicted RBP10.17□□□□□ -0.78
EFNB1-201ENST00000204961 C6orf48Q9UBA6 75 aa10.17□□□□□ -0.78
EFNB1-201ENST00000204961 Q8N9L7 120 aa10.16□□□□□ -0.78
EFNB1-201ENST00000204961 RBM3P98179 157 aaKnown RBP10.15□□□□□ -0.78
EFNB1-201ENST00000204961 LYPD5Q6UWN5 251 aa10.15□□□□□ -0.78
EFNB1-201ENST00000204961 SRRM2Q9UQ35 2752 aaKnown RBP10.15□□□□□ -0.78
EFNB1-201ENST00000204961 C1orf43Q9BWL3 253 aa10.15□□□□□ -0.79
EFNB1-201ENST00000204961 TMEM256-PLSCR3K7ERE1 68 aa10.14□□□□□ -0.79
EFNB1-201ENST00000204961 CCKP06307 115 aa10.14□□□□□ -0.79
EFNB1-201ENST00000204961 SNURFQ9Y675 71 aa10.14□□□□□ -0.79
EFNB1-201ENST00000204961 TMEM258P61165 79 aa10.14□□□□□ -0.79
EFNB1-201ENST00000204961 UPK3BQ9BT76 320 aa10.13□□□□□ -0.79
EFNB1-201ENST00000204961 RPL37AP8A6NKH3 93 aa10.13□□□□□ -0.79
EFNB1-201ENST00000204961 UBL5Q9BZL1 73 aa10.13□□□□□ -0.79
EFNB1-201ENST00000204961 Q6ZRU5 148 aa10.13□□□□□ -0.79
EFNB1-201ENST00000204961 LELP1Q5T871 98 aa10.12□□□□□ -0.79
EFNB1-201ENST00000204961 LINC00612Q8N6U2 182 aa10.12□□□□□ -0.79
EFNB1-201ENST00000204961 LINC00575Q6W349 94 aa10.12□□□□□ -0.79
EFNB1-201ENST00000204961 A0A0U1RQV1 116 aa10.11□□□□□ -0.79
EFNB1-201ENST00000204961 A0A0J9YWU9 116 aa10.1□□□□□ -0.79
EFNB1-201ENST00000204961 C3orf84H3BNL1 204 aa10.1□□□□□ -0.79
EFNB1-201ENST00000204961 MIFP14174 115 aa10.09□□□□□ -0.79
EFNB1-201ENST00000204961 ESRGQ1W209 222 aa10.09□□□□□ -0.79
EFNB1-201ENST00000204961 DIRC1Q969H9 104 aa10.08□□□□□ -0.8
EFNB1-201ENST00000204961 JMJD7-PLA2G4BH0Y9G9 81 aa10.07□□□□□ -0.8
EFNB1-201ENST00000204961 ZNF73O43830 326 aaPredicted RBP10.07□□□□□ -0.8
EFNB1-201ENST00000204961 OBSCN-AS1Q96MR7 158 aa10.07□□□□□ -0.8
EFNB1-201ENST00000204961 KRTAP10-11P60412 298 aa10.07□□□□□ -0.8
EFNB1-201ENST00000204961 COL7A1Q02388 2944 aa10.06□□□□□ -0.8
EFNB1-201ENST00000204961 ANK2Q01484 3957 aa10.06□□□□□ -0.8
EFNB1-201ENST00000204961 RMI2Q96E14 147 aa10.05□□□□□ -0.8
EFNB1-201ENST00000204961 TRAV10A0A0B4J240 114 aa10.05□□□□□ -0.8
EFNB1-201ENST00000204961 A0A0G2JQZ4 141 aa10.05□□□□□ -0.8
EFNB1-201ENST00000204961 A0A1W2PNN7 141 aa10.05□□□□□ -0.8
EFNB1-201ENST00000204961 COX7BP24311 80 aa10.04□□□□□ -0.8
EFNB1-201ENST00000204961 RPS28P62857 69 aaKnown RBP10.04□□□□□ -0.8
EFNB1-201ENST00000204961 DEFB131BA0A096LNP1 70 aa10.04□□□□□ -0.8
EFNB1-201ENST00000204961 CASC10Q5T4H9 136 aa10.04□□□□□ -0.8
EFNB1-201ENST00000204961 FAM236DA0A1B0GTK5 79 aa10.04□□□□□ -0.8
EFNB1-201ENST00000204961 FAM168BA1KXE4 195 aa10.04□□□□□ -0.8
EFNB1-201ENST00000204961 FAM236CP0DP71 79 aa10.04□□□□□ -0.8
EFNB1-201ENST00000204961 COX17Q14061 63 aa10.04□□□□□ -0.8
EFNB1-201ENST00000204961 NDUFC2O95298 119 aa10.02□□□□□ -0.81
EFNB1-201ENST00000204961 Q6ZRP5 223 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms