RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 LAMTOR3Q9UHA4 124 aa9.51□□□□□ -0.89
USH1C-201ENST00000005226 FASNP49327 2511 aaKnown RBP9.51□□□□□ -0.89
USH1C-201ENST00000005226 SPAG11BQ08648 103 aa9.51□□□□□ -0.89
USH1C-201ENST00000005226 COX17Q14061 63 aa9.51□□□□□ -0.89
USH1C-201ENST00000005226 CYSRT1A8MQ03 144 aa9.5□□□□□ -0.89
USH1C-201ENST00000005226 IGHV4-28A0A0C4DH34 117 aa9.5□□□□□ -0.89
USH1C-201ENST00000005226 XAGE1AQ9HD64 81 aa9.5□□□□□ -0.89
USH1C-201ENST00000005226 KLK12Q9UKR0 248 aa9.5□□□□□ -0.89
USH1C-201ENST00000005226 DAD1P61803 113 aa9.49□□□□□ -0.89
USH1C-201ENST00000005226 OXTP01178 125 aa9.48□□□□□ -0.89
USH1C-201ENST00000005226 RBM3P98179 157 aaKnown RBP9.48□□□□□ -0.89
USH1C-201ENST00000005226 DPH3Q96FX2 82 aa9.48□□□□□ -0.89
USH1C-201ENST00000005226 UBL5Q9BZL1 73 aa9.48□□□□□ -0.89
USH1C-201ENST00000005226 Q6ZQT0 140 aa9.47□□□□□ -0.89
USH1C-201ENST00000005226 Q6ZQY7 126 aa9.47□□□□□ -0.89
USH1C-201ENST00000005226 HAMPP81172 84 aa9.47□□□□□ -0.89
USH1C-201ENST00000005226 SMIM9A6NGZ8 99 aa9.46□□□□□ -0.89
USH1C-201ENST00000005226 HELZ2Q9BYK8 2649 aaKnown RBP9.46□□□□□ -0.9
USH1C-201ENST00000005226 HIVEP1P15822 2718 aa9.46□□□□□ -0.9
USH1C-201ENST00000005226 LYRM9A8MSI8 78 aa9.46□□□□□ -0.9
USH1C-201ENST00000005226 UNC79Q9P2D8 2635 aa9.45□□□□□ -0.9
USH1C-201ENST00000005226 TRBV10-3A0A0K0K1G6 114 aa9.45□□□□□ -0.9
USH1C-201ENST00000005226 LYPD5Q6UWN5 251 aa9.45□□□□□ -0.9
USH1C-201ENST00000005226 C20orf197Q8N268 126 aa9.45□□□□□ -0.9
USH1C-201ENST00000005226 ATRQ13535 2644 aa9.44□□□□□ -0.9
USH1C-201ENST00000005226 TMEM258P61165 79 aa9.44□□□□□ -0.9
USH1C-201ENST00000005226 ZNF561-AS1K7EIQ3 104 aa9.43□□□□□ -0.9
USH1C-201ENST00000005226 SCXQ7RTU7 201 aa9.43□□□□□ -0.9
USH1C-201ENST00000005226 TRRAPQ9Y4A5 3859 aa9.43□□□□□ -0.9
USH1C-201ENST00000005226 PKD1L1Q8TDX9 2849 aa9.43□□□□□ -0.9
USH1C-201ENST00000005226 IGLV6-57P01721 117 aa9.43□□□□□ -0.9
USH1C-201ENST00000005226 TRAV10A0A0B4J240 114 aa9.42□□□□□ -0.9
USH1C-201ENST00000005226 C6orf48Q9UBA6 75 aa9.42□□□□□ -0.9
USH1C-201ENST00000005226 LINC01547P58512 204 aaPredicted RBP9.42□□□□□ -0.9
USH1C-201ENST00000005226 HIGD2BQ4VC39 106 aa9.42□□□□□ -0.9
USH1C-201ENST00000005226 ATP5EP2Q5VTU8 51 aa9.41□□□□□ -0.9
USH1C-201ENST00000005226 Q6ZVQ6 151 aa9.41□□□□□ -0.9
USH1C-201ENST00000005226 RPS28P62857 69 aaKnown RBP9.41□□□□□ -0.9
USH1C-201ENST00000005226 A0A0J9YWU9 116 aa9.4□□□□□ -0.9
USH1C-201ENST00000005226 IGHV4-30-4P0DP06 118 aa9.4□□□□□ -0.9
USH1C-201ENST00000005226 TEP1Q99973 2627 aaKnown RBP9.4□□□□□ -0.9
USH1C-201ENST00000005226 Q8NAQ8 132 aa9.4□□□□□ -0.9
USH1C-201ENST00000005226 HECTD1Q9ULT8 2610 aa9.39□□□□□ -0.91
USH1C-201ENST00000005226 OTOGQ6ZRI0 2925 aa9.39□□□□□ -0.91
USH1C-201ENST00000005226 LELP1Q5T871 98 aa9.39□□□□□ -0.91
USH1C-201ENST00000005226 LOC110117498A0A087WWA1 95 aa9.39□□□□□ -0.91
USH1C-201ENST00000005226 C4orf26Q17RF5 130 aa9.37□□□□□ -0.91
USH1C-201ENST00000005226 MUC7Q8TAX7 377 aa9.37□□□□□ -0.91
USH1C-201ENST00000005226 DIRC1Q969H9 104 aa9.37□□□□□ -0.91
USH1C-201ENST00000005226 PRR34Q9NV39 138 aa9.37□□□□□ -0.91
USH1C-201ENST00000005226 ZNF73O43830 326 aaPredicted RBP9.36□□□□□ -0.91
USH1C-201ENST00000005226 SNURFQ9Y675 71 aa9.36□□□□□ -0.91
USH1C-201ENST00000005226 SPART-AS1P0CW21 52 aa9.36□□□□□ -0.91
USH1C-201ENST00000005226 APOC4P55056 127 aa9.36□□□□□ -0.91
USH1C-201ENST00000005226 C9orf66Q5T8R8 295 aa9.36□□□□□ -0.91
USH1C-201ENST00000005226 COX7BP24311 80 aa9.35□□□□□ -0.91
USH1C-201ENST00000005226 WFDC10BQ8IUB3 73 aa9.34□□□□□ -0.91
USH1C-201ENST00000005226 RMI2Q96E14 147 aa9.33□□□□□ -0.92
USH1C-201ENST00000005226 CAMK2N2Q96S95 79 aa9.33□□□□□ -0.92
USH1C-201ENST00000005226 Q8N9L7 120 aa9.32□□□□□ -0.92
USH1C-201ENST00000005226 MIFP14174 115 aa9.32□□□□□ -0.92
USH1C-201ENST00000005226 Q6ZRU5 148 aa9.32□□□□□ -0.92
USH1C-201ENST00000005226 TRAV7A0A075B6U4 112 aa9.31□□□□□ -0.92
USH1C-201ENST00000005226 RETNQ9HD89 108 aa9.31□□□□□ -0.92
USH1C-201ENST00000005226 VPREB1P12018 145 aa9.31□□□□□ -0.92
USH1C-201ENST00000005226 HRCT1Q6UXD1 115 aa9.31□□□□□ -0.92
USH1C-201ENST00000005226 GVQW2A0A096LPI5 108 aaPredicted RBP9.3□□□□□ -0.92
USH1C-201ENST00000005226 H7BZZ5 65 aa9.3□□□□□ -0.92
USH1C-201ENST00000005226 C5orf47Q569G3 176 aa9.3□□□□□ -0.92
USH1C-201ENST00000005226 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.3□□□□□ -0.92
USH1C-201ENST00000005226 TM2D3Q9BRN9 247 aa9.3□□□□□ -0.92
USH1C-201ENST00000005226 TRBV7-4A0A0J9YYF1 115 aa9.3□□□□□ -0.92
USH1C-201ENST00000005226 ELOF1P60002 83 aaKnown RBP9.3□□□□□ -0.92
USH1C-201ENST00000005226 Q5XG85 94 aa9.3□□□□□ -0.92
USH1C-201ENST00000005226 INAFM1C9JVW0 142 aa9.29□□□□□ -0.92
USH1C-201ENST00000005226 NSD1Q96L73 2696 aaPredicted RBP9.29□□□□□ -0.92
USH1C-201ENST00000005226 FAM236DA0A1B0GTK5 79 aa9.29□□□□□ -0.92
USH1C-201ENST00000005226 FAM236CP0DP71 79 aa9.29□□□□□ -0.92
USH1C-201ENST00000005226 DEFB105AQ8NG35 78 aa9.27□□□□□ -0.93
USH1C-201ENST00000005226 TENM3Q9P273 2699 aa9.26□□□□□ -0.93
USH1C-201ENST00000005226 PDE6GP18545 87 aa9.26□□□□□ -0.93
USH1C-201ENST00000005226 CXCL6P80162 114 aa9.26□□□□□ -0.93
USH1C-201ENST00000005226 KPRPQ5T749 579 aaPredicted RBP9.26□□□□□ -0.93
USH1C-201ENST00000005226 KRTAP26-1Q6PEX3 210 aa9.26□□□□□ -0.93
USH1C-201ENST00000005226 NDUFC2-KCTD14E9PQ53 114 aa9.25□□□□□ -0.93
USH1C-201ENST00000005226 C15orf56Q8N910 161 aa9.25□□□□□ -0.93
USH1C-201ENST00000005226 F8WEM9 126 aa9.25□□□□□ -0.93
USH1C-201ENST00000005226 Q6ZRP5 223 aa9.25□□□□□ -0.93
USH1C-201ENST00000005226 M0R378 163 aa9.25□□□□□ -0.93
USH1C-201ENST00000005226 LINC00528Q8N1L1 170 aa9.25□□□□□ -0.93
USH1C-201ENST00000005226 C3orf84H3BNL1 204 aa9.24□□□□□ -0.93
USH1C-201ENST00000005226 Q6ZTC4 211 aa9.23□□□□□ -0.93
USH1C-201ENST00000005226 BPY2O14599 106 aa9.23□□□□□ -0.93
USH1C-201ENST00000005226 EGFEM1PQ0D2K5 195 aa9.23□□□□□ -0.93
USH1C-201ENST00000005226 ESRGQ1W209 222 aa9.22□□□□□ -0.93
USH1C-201ENST00000005226 IGKV2D-24A0A075B6R9 120 aa9.21□□□□□ -0.93
USH1C-201ENST00000005226 TRBV7-6A0A0J9YX20 115 aa9.21□□□□□ -0.93
USH1C-201ENST00000005226 KLKP1Q107X0 134 aa9.21□□□□□ -0.93
USH1C-201ENST00000005226 H3BQ85 93 aa9.2□□□□□ -0.94
USH1C-201ENST00000005226 OXLD1Q5BKU9 147 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms