RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 V9GYY9 64 aa7.04□□□□□ -1.28
NIPAL3-201ENST00000003912 Q8N9L7 120 aa7.03□□□□□ -1.28
NIPAL3-201ENST00000003912 FAM236DA0A1B0GTK5 79 aa7.03□□□□□ -1.28
NIPAL3-201ENST00000003912 FAM236CP0DP71 79 aa7.03□□□□□ -1.28
NIPAL3-201ENST00000003912 MUC4Q99102 2169 aa7.03□□□□□ -1.28
NIPAL3-201ENST00000003912 FAM240AA0A1B0GVK7 77 aa7.02□□□□□ -1.29
NIPAL3-201ENST00000003912 PHF5AQ7RTV0 110 aaKnown RBP7.02□□□□□ -1.29
NIPAL3-201ENST00000003912 CHD7Q9P2D1 2997 aa7.02□□□□□ -1.29
NIPAL3-201ENST00000003912 CEP350Q5VT06 3117 aa7.01□□□□□ -1.29
NIPAL3-201ENST00000003912 TRBV7-6A0A0J9YX20 115 aa7.01□□□□□ -1.29
NIPAL3-201ENST00000003912 HELZ2Q9BYK8 2649 aaKnown RBP7.01□□□□□ -1.29
NIPAL3-201ENST00000003912 PLA2G1BP04054 148 aaKnown RBP7.01□□□□□ -1.29
NIPAL3-201ENST00000003912 NDUFC1O43677 76 aa7□□□□□ -1.29
NIPAL3-201ENST00000003912 SERP2Q8N6R1 65 aa7□□□□□ -1.29
NIPAL3-201ENST00000003912 GIG44P09565 113 aaPredicted RBP7□□□□□ -1.29
NIPAL3-201ENST00000003912 CRYGAP11844 174 aa7□□□□□ -1.29
NIPAL3-201ENST00000003912 FAM30AQ9NZY2 134 aa7□□□□□ -1.29
NIPAL3-201ENST00000003912 Q6ZVQ6 151 aa6.99□□□□□ -1.29
NIPAL3-201ENST00000003912 Q6Q795 121 aa6.99□□□□□ -1.29
NIPAL3-201ENST00000003912 SPTSSBQ8NFR3 76 aa6.99□□□□□ -1.29
NIPAL3-201ENST00000003912 MOBPQ13875 183 aa6.98□□□□□ -1.29
NIPAL3-201ENST00000003912 KIAA0087Q14695 138 aa6.98□□□□□ -1.29
NIPAL3-201ENST00000003912 A0A0U1RQV1 116 aa6.98□□□□□ -1.29
NIPAL3-201ENST00000003912 LINC00612Q8N6U2 182 aa6.98□□□□□ -1.29
NIPAL3-201ENST00000003912 PRRC2CQ9Y520 2896 aaKnown RBP6.98□□□□□ -1.29
NIPAL3-201ENST00000003912 LINC01547P58512 204 aaPredicted RBP6.97□□□□□ -1.29
NIPAL3-201ENST00000003912 COX7CP15954 63 aa6.97□□□□□ -1.29
NIPAL3-201ENST00000003912 ELOF1P60002 83 aaKnown RBP6.97□□□□□ -1.29
NIPAL3-201ENST00000003912 PRR15LQ9BU68 103 aa6.97□□□□□ -1.29
NIPAL3-201ENST00000003912 Q6ZRX8 168 aa6.96□□□□□ -1.29
NIPAL3-201ENST00000003912 CHD9Q3L8U1 2897 aa6.96□□□□□ -1.29
NIPAL3-201ENST00000003912 ATP5EP56381 51 aaPredicted RBP6.96□□□□□ -1.3
NIPAL3-201ENST00000003912 SPACA4Q8TDM5 124 aa6.96□□□□□ -1.3
NIPAL3-201ENST00000003912 EPM2AB3EWF7 344 aa6.96□□□□□ -1.3
NIPAL3-201ENST00000003912 BCE1O60756 84 aa6.96□□□□□ -1.3
NIPAL3-201ENST00000003912 CHTF8P0CG12 524 aa6.96□□□□□ -1.3
NIPAL3-201ENST00000003912 K7ERS5 55 aa6.95□□□□□ -1.3
NIPAL3-201ENST00000003912 TYMSOSQ8TAI1 123 aa6.95□□□□□ -1.3
NIPAL3-201ENST00000003912 MPLKIPQ8TAP9 179 aa6.95□□□□□ -1.3
NIPAL3-201ENST00000003912 RPL37AP61513 92 aaKnown RBP6.95□□□□□ -1.3
NIPAL3-201ENST00000003912 SERP1Q9Y6X1 66 aa6.95□□□□□ -1.3
NIPAL3-201ENST00000003912 Q8NBF4 154 aa6.94□□□□□ -1.3
NIPAL3-201ENST00000003912 SNURFQ9Y675 71 aa6.94□□□□□ -1.3
NIPAL3-201ENST00000003912 DEFB116Q30KQ4 102 aa6.94□□□□□ -1.3
NIPAL3-201ENST00000003912 SOSTDC1Q6X4U4 206 aa6.94□□□□□ -1.3
NIPAL3-201ENST00000003912 PRR34Q9NV39 138 aa6.94□□□□□ -1.3
NIPAL3-201ENST00000003912 LINC00208Q96KT6 92 aa6.93□□□□□ -1.3
NIPAL3-201ENST00000003912 LINC00336Q6ZUF6 198 aa6.93□□□□□ -1.3
NIPAL3-201ENST00000003912 C1orf195Q5TG92 126 aa6.93□□□□□ -1.3
NIPAL3-201ENST00000003912 FLNAP21333 2647 aaKnown RBP6.93□□□□□ -1.3
NIPAL3-201ENST00000003912 RETNLBQ9BQ08 111 aa6.92□□□□□ -1.3
NIPAL3-201ENST00000003912 MGAM2Q2M2H8 2515 aa6.92□□□□□ -1.3
NIPAL3-201ENST00000003912 TRAV7A0A075B6U4 112 aa6.92□□□□□ -1.3
NIPAL3-201ENST00000003912 J3QL48 77 aa6.92□□□□□ -1.3
NIPAL3-201ENST00000003912 APLNQ9ULZ1 77 aa6.91□□□□□ -1.3
NIPAL3-201ENST00000003912 A0A087WTM6 91 aa6.91□□□□□ -1.3
NIPAL3-201ENST00000003912 A0A1B0GW54 56 aa6.91□□□□□ -1.3
NIPAL3-201ENST00000003912 HTTP42858 3142 aa6.91□□□□□ -1.3
NIPAL3-201ENST00000003912 HCG22E2RYF7 251 aa6.91□□□□□ -1.3
NIPAL3-201ENST00000003912 ITPR3Q14573 2671 aa6.91□□□□□ -1.3
NIPAL3-201ENST00000003912 VPREB1P12018 145 aa6.9□□□□□ -1.3
NIPAL3-201ENST00000003912 PRR4Q16378 134 aa6.9□□□□□ -1.3
NIPAL3-201ENST00000003912 A0A087WVE0 104 aa6.88□□□□□ -1.31
NIPAL3-201ENST00000003912 LINC00846Q9NV44 126 aa6.88□□□□□ -1.31
NIPAL3-201ENST00000003912 LINC00476Q8WZB0 136 aa6.88□□□□□ -1.31
NIPAL3-201ENST00000003912 CXCL6P80162 114 aa6.87□□□□□ -1.31
NIPAL3-201ENST00000003912 FAM168BA1KXE4 195 aa6.87□□□□□ -1.31
NIPAL3-201ENST00000003912 C15orf56Q8N910 161 aa6.87□□□□□ -1.31
NIPAL3-201ENST00000003912 CFAP46Q8IYW2 2715 aa6.87□□□□□ -1.31
NIPAL3-201ENST00000003912 H0Y9P7 68 aa6.87□□□□□ -1.31
NIPAL3-201ENST00000003912 IGLV6-57P01721 117 aa6.86□□□□□ -1.31
NIPAL3-201ENST00000003912 IGLV1-50A0A075B6I6 118 aa6.86□□□□□ -1.31
NIPAL3-201ENST00000003912 SMIM26A0A096LP01 95 aa6.86□□□□□ -1.31
NIPAL3-201ENST00000003912 C9orf163Q8N9P6 203 aa6.86□□□□□ -1.31
NIPAL3-201ENST00000003912 ST20-AS1Q8NBB2 130 aa6.86□□□□□ -1.31
NIPAL3-201ENST00000003912 SERTAD4-AS1Q5TG53 156 aa6.86□□□□□ -1.31
NIPAL3-201ENST00000003912 WIPF1O43516 503 aa6.85□□□□□ -1.31
NIPAL3-201ENST00000003912 FAM218AQ96MZ4 157 aa6.85□□□□□ -1.31
NIPAL3-201ENST00000003912 C5orf42Q9H799 3197 aa6.84□□□□□ -1.31
NIPAL3-201ENST00000003912 USP24Q9UPU5 2620 aa6.84□□□□□ -1.31
NIPAL3-201ENST00000003912 ZNF292O60281 2723 aa6.84□□□□□ -1.31
NIPAL3-201ENST00000003912 PCOTHQ58A44 107 aa6.84□□□□□ -1.31
NIPAL3-201ENST00000003912 KCNQ1DNQ9H478 68 aa6.84□□□□□ -1.31
NIPAL3-201ENST00000003912 RANBP2P49792 3224 aaKnown RBP6.84□□□□□ -1.32
NIPAL3-201ENST00000003912 CDIP1Q9H305 208 aa6.83□□□□□ -1.32
NIPAL3-201ENST00000003912 ZNF575Q86XF7 245 aa6.83□□□□□ -1.32
NIPAL3-201ENST00000003912 LITAFQ99732 161 aa6.83□□□□□ -1.32
NIPAL3-201ENST00000003912 TRANK1O15050 2925 aa6.83□□□□□ -1.32
NIPAL3-201ENST00000003912 IGKV2D-30A0A075B6S6 120 aa6.83□□□□□ -1.32
NIPAL3-201ENST00000003912 IGKV2-30P06310 120 aa6.83□□□□□ -1.32
NIPAL3-201ENST00000003912 TLX1NBP0CAT3 122 aa6.83□□□□□ -1.32
NIPAL3-201ENST00000003912 TP53AIP1Q9HCN2 124 aa6.83□□□□□ -1.32
NIPAL3-201ENST00000003912 hDV103S1A0JD37 113 aa6.82□□□□□ -1.32
NIPAL3-201ENST00000003912 ATRQ13535 2644 aa6.82□□□□□ -1.32
NIPAL3-201ENST00000003912 LOC110117498A0A087WWA1 95 aa6.81□□□□□ -1.32
NIPAL3-201ENST00000003912 ZNF861PO60384 105 aa6.81□□□□□ -1.32
NIPAL3-201ENST00000003912 LINC00313P59037 77 aa6.81□□□□□ -1.32
NIPAL3-201ENST00000003912 MAST4O15021 2626 aa6.8□□□□□ -1.32
NIPAL3-201ENST00000003912 CNBPP62633 177 aaKnown RBP6.8□□□□□ -1.32
NIPAL3-201ENST00000003912 PLA2G2DQ9UNK4 145 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms