RNA–Protein interactions for RNA: ENST00000641625.1

CASC19-246, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,606 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-246ENST00000641625 VAMP3Q15836 100 aa4.08□□□□□ -1.76
CASC19-246ENST00000641625 COX19Q49B96 90 aa4.08□□□□□ -1.76
CASC19-246ENST00000641625 TMEM141Q96I45 108 aa4.08□□□□□ -1.76
CASC19-246ENST00000641625 IGLV4-69A0A075B6H9 119 aa4.07□□□□□ -1.76
CASC19-246ENST00000641625 TGIF2-C20orf24A0A0A6YYL0 155 aa4.07□□□□□ -1.76
CASC19-246ENST00000641625 IGHV3OR16-9A0A0B4J2B5 98 aa4.07□□□□□ -1.76
CASC19-246ENST00000641625 FABP9Q0Z7S8 132 aa4.07□□□□□ -1.76
CASC19-246ENST00000641625 Q6ZN92 141 aa4.07□□□□□ -1.76
CASC19-246ENST00000641625 TEX43Q6ZNM6 134 aa4.07□□□□□ -1.76
CASC19-246ENST00000641625 PRSS3P2Q8NHM4 247 aa4.07□□□□□ -1.76
CASC19-246ENST00000641625 CARD19Q96LW7 228 aa4.07□□□□□ -1.76
CASC19-246ENST00000641625 IGKV2-24A0A0C4DH68 120 aa4.06□□□□□ -1.76
CASC19-246ENST00000641625 IGIPA6NJ69 53 aa4.06□□□□□ -1.76
CASC19-246ENST00000641625 APOMO95445 188 aa4.06□□□□□ -1.76
CASC19-246ENST00000641625 SPAG11BQ08648 103 aa4.06□□□□□ -1.76
CASC19-246ENST00000641625 SYCNQ0VAF6 134 aa4.06□□□□□ -1.76
CASC19-246ENST00000641625 ZC2HC1BQ5TFG8 222 aa4.06□□□□□ -1.76
CASC19-246ENST00000641625 LINC00173Q6ZV60 143 aa4.06□□□□□ -1.76
CASC19-246ENST00000641625 SPACA4Q8TDM5 124 aa4.06□□□□□ -1.76
CASC19-246ENST00000641625 DPH3Q96FX2 82 aa4.06□□□□□ -1.76
CASC19-246ENST00000641625 C2orf88Q9BSF0 95 aa4.06□□□□□ -1.76
CASC19-246ENST00000641625 A0A087WYN8 130 aa4.06□□□□□ -1.76
CASC19-246ENST00000641625 G0S2P27469 103 aa4.06□□□□□ -1.76
CASC19-246ENST00000641625 UBE2D1P51668 147 aa4.06□□□□□ -1.76
CASC19-246ENST00000641625 LINC00242Q5T6M2 205 aa4.06□□□□□ -1.76
CASC19-246ENST00000641625 Q6ZRU5 148 aa4.06□□□□□ -1.76
CASC19-246ENST00000641625 PRR26Q8N8Z3 221 aa4.06□□□□□ -1.76
CASC19-246ENST00000641625 OR10D4PQ8NGN7 298 aa4.06□□□□□ -1.76
CASC19-246ENST00000641625 ORAOV1Q8WV07 137 aa4.06□□□□□ -1.76
CASC19-246ENST00000641625 TOMM6Q96B49 74 aa4.06□□□□□ -1.76
CASC19-246ENST00000641625 CAMK2N2Q96S95 79 aa4.06□□□□□ -1.76
CASC19-246ENST00000641625 AMELXQ99217 191 aa4.06□□□□□ -1.76
CASC19-246ENST00000641625 A0A087WZ39 114 aa4.05□□□□□ -1.76
CASC19-246ENST00000641625 A0A096LNI7 61 aa4.05□□□□□ -1.76
CASC19-246ENST00000641625 LINC01546A6NGU7 62 aa4.05□□□□□ -1.76
CASC19-246ENST00000641625 KRTAP10-4P60372 401 aaPredicted RBP4.05□□□□□ -1.76
CASC19-246ENST00000641625 FA2HQ7L5A8 372 aa4.05□□□□□ -1.76
CASC19-246ENST00000641625 C2orf48Q96LS8 159 aa4.05□□□□□ -1.76
CASC19-246ENST00000641625 TIMM17AQ99595 171 aa4.05□□□□□ -1.76
CASC19-246ENST00000641625 PLAC8Q9NZF1 115 aa4.05□□□□□ -1.76
CASC19-246ENST00000641625 PKIGQ9Y2B9 76 aa4.05□□□□□ -1.76
CASC19-246ENST00000641625 TRAPPC1Q9Y5R8 145 aa4.05□□□□□ -1.76
CASC19-246ENST00000641625 SCGB3A1Q96QR1 104 aa4.04□□□□□ -1.76
CASC19-246ENST00000641625 SMCO4Q9NRQ5 59 aa4.04□□□□□ -1.76
CASC19-246ENST00000641625 LINC00474Q9P2X8 69 aa4.04□□□□□ -1.76
CASC19-246ENST00000641625 LINC01549A6NIU2 74 aa4.03□□□□□ -1.76
CASC19-246ENST00000641625 ATP5LO75964 103 aa4.03□□□□□ -1.76
CASC19-246ENST00000641625 RPL37AP61513 92 aaKnown RBP4.03□□□□□ -1.76
CASC19-246ENST00000641625 SRSF9Q13242 221 aaKnown RBP eCLIP4.03□□□□□ -1.761e-6■□□□□ 9.5
CASC19-246ENST00000641625 STPG4Q8N801 248 aa4.03□□□□□ -1.76
CASC19-246ENST00000641625 C18orf32Q8TCD1 76 aa4.03□□□□□ -1.76
CASC19-246ENST00000641625 URB1-AS1Q96HZ7 61 aa4.03□□□□□ -1.76
CASC19-246ENST00000641625 YPEL4Q96NS1 127 aa4.03□□□□□ -1.76
CASC19-246ENST00000641625 HERC1Q15751 4861 aa4.03□□□□□ -1.76
CASC19-246ENST00000641625 A0A0J9YXV3 536 aa4.03□□□□□ -1.77
CASC19-246ENST00000641625 LOC107984640A0A0U1RRK4 108 aa4.03□□□□□ -1.77
CASC19-246ENST00000641625 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.03□□□□□ -1.77
CASC19-246ENST00000641625 NDUFA1O15239 70 aa4.03□□□□□ -1.77
CASC19-246ENST00000641625 HERVK_113P63121 156 aa4.03□□□□□ -1.77
CASC19-246ENST00000641625 RPL18AQ02543 176 aaKnown RBP4.03□□□□□ -1.77
CASC19-246ENST00000641625 C10orf25Q5T742 122 aa4.03□□□□□ -1.77
CASC19-246ENST00000641625 Q6ZVQ6 151 aa4.03□□□□□ -1.77
CASC19-246ENST00000641625 FAM19A3Q7Z5A8 133 aa4.03□□□□□ -1.77
CASC19-246ENST00000641625 CBLN2Q8IUK8 224 aa4.03□□□□□ -1.77
CASC19-246ENST00000641625 MRPL35Q9NZE8 188 aaKnown RBP4.03□□□□□ -1.77
CASC19-246ENST00000641625 LRP1Q07954 4544 aaKnown RBP4.02□□□□□ -1.77
CASC19-246ENST00000641625 SEC11AP67812 179 aa4.02□□□□□ -1.77
CASC19-246ENST00000641625 KIAA0087Q14695 138 aa4.02□□□□□ -1.77
CASC19-246ENST00000641625 UNQ6190/PRO20217Q6UXQ8 127 aa4.02□□□□□ -1.77
CASC19-246ENST00000641625 LINC01561Q8N1V8 128 aa4.02□□□□□ -1.77
CASC19-246ENST00000641625 C7orf33Q8WU49 177 aa4.02□□□□□ -1.77
CASC19-246ENST00000641625 CST9LQ9H4G1 147 aa4.02□□□□□ -1.77
CASC19-246ENST00000641625 CDKN2A-AS1Q9UH64 79 aa4.02□□□□□ -1.77
CASC19-246ENST00000641625 A0A096LNJ9 63 aa4.01□□□□□ -1.77
CASC19-246ENST00000641625 HBDP02042 147 aa4.01□□□□□ -1.77
CASC19-246ENST00000641625 LINC00614P0C842 121 aa4.01□□□□□ -1.77
CASC19-246ENST00000641625 RPL24P83731 157 aaKnown RBP4.01□□□□□ -1.77
CASC19-246ENST00000641625 PMCHL1Q16048 86 aa4.01□□□□□ -1.77
CASC19-246ENST00000641625 C2orf82Q6UX34 121 aa4.01□□□□□ -1.77
CASC19-246ENST00000641625 PACRGQ96M98 296 aaPredicted RBP4.01□□□□□ -1.77
CASC19-246ENST00000641625 C6orf48Q9UBA6 75 aa4.01□□□□□ -1.77
CASC19-246ENST00000641625 TINCRA0A1B0GVN0 87 aa4□□□□□ -1.77
CASC19-246ENST00000641625 TSPAN13O95857 204 aa4□□□□□ -1.77
CASC19-246ENST00000641625 PRSS2P07478 247 aa4□□□□□ -1.77
CASC19-246ENST00000641625 HNRNPA3P51991 378 aaKnown RBP4□□□□□ -1.77
CASC19-246ENST00000641625 RAB5BP61020 215 aa4□□□□□ -1.77
CASC19-246ENST00000641625 PMVKQ15126 192 aa4□□□□□ -1.77
CASC19-246ENST00000641625 TOMM7Q9P0U1 55 aa4□□□□□ -1.77
CASC19-246ENST00000641625 IGLV5-45A0A087WSX0 123 aa3.99□□□□□ -1.77
CASC19-246ENST00000641625 TRBV30A0A0K0K1B3 111 aa3.99□□□□□ -1.77
CASC19-246ENST00000641625 A0A1W2PNN7 141 aa3.99□□□□□ -1.77
CASC19-246ENST00000641625 HSBP1O75506 76 aa3.99□□□□□ -1.77
CASC19-246ENST00000641625 CKS1BP61024 79 aa3.99□□□□□ -1.77
CASC19-246ENST00000641625 C9orf116Q5BN46 136 aaPredicted RBP3.99□□□□□ -1.77
CASC19-246ENST00000641625 Q6ZRP5 223 aa3.99□□□□□ -1.77
CASC19-246ENST00000641625 Q8IZM0 81 aa3.99□□□□□ -1.77
CASC19-246ENST00000641625 MAP1LC3CQ9BXW4 147 aa3.99□□□□□ -1.77
CASC19-246ENST00000641625 IGLV9-49A0A0B4J1Y8 123 aa3.99□□□□□ -1.77
CASC19-246ENST00000641625 SMIM1B2RUZ4 78 aa3.99□□□□□ -1.77
CASC19-246ENST00000641625 TLX1NBP0CAT3 122 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms