RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 Q8IZM0 81 aa5.94□□□□□ -1.46
SCARB2-225ENST00000640900 Q8N814 137 aa5.94□□□□□ -1.46
SCARB2-225ENST00000640900 E9PLD3 99 aa5.93□□□□□ -1.46
SCARB2-225ENST00000640900 ORAOV1Q8WV07 137 aa5.93□□□□□ -1.46
SCARB2-225ENST00000640900 LECT2O14960 151 aa5.92□□□□□ -1.46
SCARB2-225ENST00000640900 LEPROTO15243 131 aa5.92□□□□□ -1.46
SCARB2-225ENST00000640900 TSPEAR-AS2P59090 65 aa5.92□□□□□ -1.46
SCARB2-225ENST00000640900 SPAG11BQ08648 103 aa5.92□□□□□ -1.46
SCARB2-225ENST00000640900 STPG4Q8N801 248 aa5.92□□□□□ -1.46
SCARB2-225ENST00000640900 COX7B2Q8TF08 81 aa5.92□□□□□ -1.46
SCARB2-225ENST00000640900 ZNF625Q96I27 306 aaPredicted RBP5.92□□□□□ -1.46
SCARB2-225ENST00000640900 IGKV2D-26A0A0A0MRZ7 120 aa5.91□□□□□ -1.46
SCARB2-225ENST00000640900 SCGB1D1O95968 90 aa5.91□□□□□ -1.46
SCARB2-225ENST00000640900 RNF151Q2KHN1 245 aa5.91□□□□□ -1.46
SCARB2-225ENST00000640900 HIGD2BQ4VC39 106 aa5.91□□□□□ -1.46
SCARB2-225ENST00000640900 ANKRD39Q53RE8 183 aa5.91□□□□□ -1.46
SCARB2-225ENST00000640900 ATOH7Q8N100 152 aa5.91□□□□□ -1.46
SCARB2-225ENST00000640900 PLEKHB2Q96CS7 222 aa5.91□□□□□ -1.46
SCARB2-225ENST00000640900 APOBP04114 4563 aaKnown RBP5.91□□□□□ -1.46
SCARB2-225ENST00000640900 hDV102S1A0JD36 115 aa5.9□□□□□ -1.46
SCARB2-225ENST00000640900 ZNF561-AS1K7EIQ3 104 aa5.9□□□□□ -1.46
SCARB2-225ENST00000640900 CXCL5P42830 114 aa5.9□□□□□ -1.46
SCARB2-225ENST00000640900 KRTAP10-2P60368 255 aa5.9□□□□□ -1.46
SCARB2-225ENST00000640900 HERVK_113P61574 105 aa5.9□□□□□ -1.46
SCARB2-225ENST00000640900 MAJINQ3KP22 176 aa5.9□□□□□ -1.46
SCARB2-225ENST00000640900 C10orf25Q5T742 122 aa5.9□□□□□ -1.46
SCARB2-225ENST00000640900 LINC00526Q96FQ7 95 aa5.9□□□□□ -1.46
SCARB2-225ENST00000640900 J3QQQ9 107 aa5.89□□□□□ -1.47
SCARB2-225ENST00000640900 NDUFA1O15239 70 aa5.89□□□□□ -1.47
SCARB2-225ENST00000640900 SYCNQ0VAF6 134 aa5.89□□□□□ -1.47
SCARB2-225ENST00000640900 C6orf226Q5I0X4 101 aa5.89□□□□□ -1.47
SCARB2-225ENST00000640900 SFTA2Q6UW10 78 aa5.89□□□□□ -1.47
SCARB2-225ENST00000640900 C2orf82Q6UX34 121 aa5.89□□□□□ -1.47
SCARB2-225ENST00000640900 UNQ6190/PRO20217Q6UXQ8 127 aa5.89□□□□□ -1.47
SCARB2-225ENST00000640900 Q6ZRU5 148 aa5.89□□□□□ -1.47
SCARB2-225ENST00000640900 C9orf163Q8N9P6 203 aa5.89□□□□□ -1.47
SCARB2-225ENST00000640900 TRBV30A0A0K0K1B3 111 aa5.88□□□□□ -1.47
SCARB2-225ENST00000640900 TLX1NBP0CAT3 122 aa5.88□□□□□ -1.47
SCARB2-225ENST00000640900 NMUP48645 174 aa5.88□□□□□ -1.47
SCARB2-225ENST00000640900 C6orf48Q9UBA6 75 aa5.88□□□□□ -1.47
SCARB2-225ENST00000640900 PRSS2P07478 247 aa5.87□□□□□ -1.47
SCARB2-225ENST00000640900 SMIM6P0DI80 62 aa5.87□□□□□ -1.47
SCARB2-225ENST00000640900 SDIM1Q6ZPB5 146 aa5.87□□□□□ -1.47
SCARB2-225ENST00000640900 CARD19Q96LW7 228 aa5.87□□□□□ -1.47
SCARB2-225ENST00000640900 CAMK2N2Q96S95 79 aa5.87□□□□□ -1.47
SCARB2-225ENST00000640900 TOMM7Q9P0U1 55 aa5.87□□□□□ -1.47
SCARB2-225ENST00000640900 NDUFA12Q9UI09 145 aa5.87□□□□□ -1.47
SCARB2-225ENST00000640900 CKS1BP61024 79 aa5.86□□□□□ -1.47
SCARB2-225ENST00000640900 HERV-K104P63124 156 aa5.86□□□□□ -1.47
SCARB2-225ENST00000640900 EPPK1P58107 5090 aaKnown RBP5.86□□□□□ -1.47
SCARB2-225ENST00000640900 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.85□□□□□ -1.47
SCARB2-225ENST00000640900 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.85□□□□□ -1.47
SCARB2-225ENST00000640900 MYMXA0A1B0GTQ4 84 aa5.85□□□□□ -1.47
SCARB2-225ENST00000640900 DLEU1O43261 78 aa5.85□□□□□ -1.47
SCARB2-225ENST00000640900 LGALS3P17931 250 aaKnown RBP5.85□□□□□ -1.47
SCARB2-225ENST00000640900 CIRBPQ14011 172 aaKnown RBP5.85□□□□□ -1.47
SCARB2-225ENST00000640900 COX17Q14061 63 aa5.85□□□□□ -1.47
SCARB2-225ENST00000640900 PCP2Q8IVA1 136 aa5.85□□□□□ -1.47
SCARB2-225ENST00000640900 LITAFQ99732 161 aa5.85□□□□□ -1.47
SCARB2-225ENST00000640900 VAMP8Q9BV40 100 aa5.85□□□□□ -1.47
SCARB2-225ENST00000640900 TTTY13Q9BZ97 58 aa5.85□□□□□ -1.47
SCARB2-225ENST00000640900 IGLV5-52A0A0A0MRZ9 124 aa5.84□□□□□ -1.47
SCARB2-225ENST00000640900 EPM2AB3EWF7 344 aa5.84□□□□□ -1.47
SCARB2-225ENST00000640900 HSBP1L1C9JCN9 74 aa5.84□□□□□ -1.47
SCARB2-225ENST00000640900 COX8AP10176 69 aa5.84□□□□□ -1.47
SCARB2-225ENST00000640900 FUSP35637 526 aaKnown RBP eCLIP5.84□□□□□ -1.47
SCARB2-225ENST00000640900 C9orf116Q5BN46 136 aaPredicted RBP5.84□□□□□ -1.47
SCARB2-225ENST00000640900 Q6ZSA8 131 aa5.84□□□□□ -1.47
SCARB2-225ENST00000640900 BOD1L2Q8IYS8 172 aa5.84□□□□□ -1.47
SCARB2-225ENST00000640900 HSPG2P98160 4391 aa5.83□□□□□ -1.48
SCARB2-225ENST00000640900 A0A0J9YXY3 114 aa5.83□□□□□ -1.48
SCARB2-225ENST00000640900 NDUFC2-KCTD14E9PQ53 114 aa5.83□□□□□ -1.48
SCARB2-225ENST00000640900 TIMM17BO60830 172 aa5.83□□□□□ -1.48
SCARB2-225ENST00000640900 SPATA45Q537H7 98 aa5.83□□□□□ -1.48
SCARB2-225ENST00000640900 ERG28Q9UKR5 140 aa5.83□□□□□ -1.48
SCARB2-225ENST00000640900 PAM16Q9Y3D7 125 aa5.83□□□□□ -1.48
SCARB2-225ENST00000640900 LOC107984156A0A0G2JMH3 177 aa5.82□□□□□ -1.48
SCARB2-225ENST00000640900 LOC107984640A0A0U1RRK4 108 aa5.82□□□□□ -1.48
SCARB2-225ENST00000640900 ZNF815PA8K554 130 aa5.82□□□□□ -1.48
SCARB2-225ENST00000640900 C16orf90A8MZG2 172 aa5.82□□□□□ -1.48
SCARB2-225ENST00000640900 LINC00587B1AMM8 73 aa5.82□□□□□ -1.48
SCARB2-225ENST00000640900 KRTAP10-1P60331 282 aa5.82□□□□□ -1.48
SCARB2-225ENST00000640900 Q6ZRP5 223 aa5.82□□□□□ -1.48
SCARB2-225ENST00000640900 ARL17AQ8IVW1 177 aa5.82□□□□□ -1.48
SCARB2-225ENST00000640900 GCSHP23434 173 aa5.81□□□□□ -1.48
SCARB2-225ENST00000640900 PTTG1IPP53801 180 aa5.81□□□□□ -1.48
SCARB2-225ENST00000640900 LINC01620Q4KN68 170 aa5.81□□□□□ -1.48
SCARB2-225ENST00000640900 ADAMTSL4-AS1Q5T5F5 129 aa5.81□□□□□ -1.48
SCARB2-225ENST00000640900 PPDPFQ9H3Y8 114 aa5.81□□□□□ -1.48
SCARB2-225ENST00000640900 PKIGQ9Y2B9 76 aa5.81□□□□□ -1.48
SCARB2-225ENST00000640900 A0A096LNI7 61 aa5.8□□□□□ -1.48
SCARB2-225ENST00000640900 PANO1I0J062 215 aa5.8□□□□□ -1.48
SCARB2-225ENST00000640900 SMIM13P0DJ93 91 aa5.8□□□□□ -1.48
SCARB2-225ENST00000640900 LINC00518Q8N0U6 118 aa5.8□□□□□ -1.48
SCARB2-225ENST00000640900 FAT1Q14517 4588 aa5.79□□□□□ -1.48
SCARB2-225ENST00000640900 S100A12P80511 92 aa5.79□□□□□ -1.48
SCARB2-225ENST00000640900 C9orf129Q5T035 196 aaKnown RBP5.79□□□□□ -1.48
SCARB2-225ENST00000640900 C2orf91Q6ZV80 131 aa5.79□□□□□ -1.48
SCARB2-225ENST00000640900 KRTAP7-1Q8IUC3 87 aa5.79□□□□□ -1.48
SCARB2-225ENST00000640900 SPACA4Q8TDM5 124 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms