RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 TRBV6-4A0A1B0GX49 114 aa9.59□□□□□ -0.87
PAX6-280ENST00000640872 GIG44P09565 113 aaPredicted RBP9.59□□□□□ -0.87
PAX6-280ENST00000640872 A0A087WZ39 114 aa9.58□□□□□ -0.88
PAX6-280ENST00000640872 SETXQ7Z333 2677 aaKnown RBP9.58□□□□□ -0.88
PAX6-280ENST00000640872 IGKV3D-7A0A0C4DH55 119 aa9.58□□□□□ -0.88
PAX6-280ENST00000640872 LY6G6DO95868 133 aa9.58□□□□□ -0.88
PAX6-280ENST00000640872 A0A1B0GX51 115 aa9.57□□□□□ -0.88
PAX6-280ENST00000640872 NCR3O14931 201 aa9.57□□□□□ -0.88
PAX6-280ENST00000640872 TRGV2A0A075B6R0 118 aa9.57□□□□□ -0.88
PAX6-280ENST00000640872 PFN2P35080 140 aa9.57□□□□□ -0.88
PAX6-280ENST00000640872 C16orf74Q96GX8 76 aa9.57□□□□□ -0.88
PAX6-280ENST00000640872 TRBV6-8A0A0A6YYG3 113 aa9.56□□□□□ -0.88
PAX6-280ENST00000640872 SS18Q15532 418 aa9.56□□□□□ -0.88
PAX6-280ENST00000640872 LOC107984640A0A0U1RRK4 108 aa9.56□□□□□ -0.88
PAX6-280ENST00000640872 hADV29S1A0JD25 119 aa9.56□□□□□ -0.88
PAX6-280ENST00000640872 PAX4O43316 350 aa9.56□□□□□ -0.88
PAX6-280ENST00000640872 SLPIP03973 132 aa9.55□□□□□ -0.88
PAX6-280ENST00000640872 CYSTM1Q9H1C7 97 aa9.55□□□□□ -0.88
PAX6-280ENST00000640872 NOTCH3Q9UM47 2321 aa9.55□□□□□ -0.88
PAX6-280ENST00000640872 J3KT08 172 aa9.55□□□□□ -0.88
PAX6-280ENST00000640872 A0A087WVE0 104 aa9.54□□□□□ -0.88
PAX6-280ENST00000640872 TRGV4A0A0C4DH28 118 aa9.54□□□□□ -0.88
PAX6-280ENST00000640872 LINC01561Q8N1V8 128 aa9.54□□□□□ -0.88
PAX6-280ENST00000640872 OR13C6PQ8NH95 151 aa9.54□□□□□ -0.88
PAX6-280ENST00000640872 C2CD3Q4AC94 2353 aa9.54□□□□□ -0.88
PAX6-280ENST00000640872 ORMDL1Q9P0S3 153 aa9.53□□□□□ -0.88
PAX6-280ENST00000640872 C11orf44Q8N8P7 122 aa9.53□□□□□ -0.88
PAX6-280ENST00000640872 LINC00167Q96N53 147 aa9.53□□□□□ -0.88
PAX6-280ENST00000640872 LINC00959A0A1B0GUT2 108 aa9.52□□□□□ -0.88
PAX6-280ENST00000640872 FHL2Q14192 279 aa9.52□□□□□ -0.88
PAX6-280ENST00000640872 SERP2Q8N6R1 65 aa9.52□□□□□ -0.88
PAX6-280ENST00000640872 UPK3BQ9BT76 320 aa9.52□□□□□ -0.88
PAX6-280ENST00000640872 OTOGQ6ZRI0 2925 aa9.52□□□□□ -0.89
PAX6-280ENST00000640872 A0A1W2PRX2 142 aa9.52□□□□□ -0.89
PAX6-280ENST00000640872 CCL24O00175 119 aa9.51□□□□□ -0.89
PAX6-280ENST00000640872 CCKP06307 115 aa9.51□□□□□ -0.89
PAX6-280ENST00000640872 ESM1Q9NQ30 184 aa9.51□□□□□ -0.89
PAX6-280ENST00000640872 USP17L23D6RBM5 183 aa9.51□□□□□ -0.89
PAX6-280ENST00000640872 RPS28P62857 69 aaKnown RBP9.51□□□□□ -0.89
PAX6-280ENST00000640872 WFDC10AQ9H1F0 79 aa9.51□□□□□ -0.89
PAX6-280ENST00000640872 CSNK1G2-AS1Q8NCQ2 148 aa9.5□□□□□ -0.89
PAX6-280ENST00000640872 C11orf68Q9H3H3 251 aaKnown RBP9.5□□□□□ -0.89
PAX6-280ENST00000640872 NANOS2P60321 138 aaKnown RBP9.5□□□□□ -0.89
PAX6-280ENST00000640872 C6orf226Q5I0X4 101 aa9.5□□□□□ -0.89
PAX6-280ENST00000640872 VWFP04275 2813 aa9.49□□□□□ -0.89
PAX6-280ENST00000640872 DNAJC9-AS1A6NH13 148 aa9.49□□□□□ -0.89
PAX6-280ENST00000640872 RPL35AP18077 110 aaKnown RBP9.49□□□□□ -0.89
PAX6-280ENST00000640872 CMC4P56277 68 aaPredicted RBP9.48□□□□□ -0.89
PAX6-280ENST00000640872 TMEM258P61165 79 aa9.48□□□□□ -0.89
PAX6-280ENST00000640872 KRTAP1-1Q07627 177 aa9.48□□□□□ -0.89
PAX6-280ENST00000640872 FAM19A5Q7Z5A7 132 aaPredicted RBP9.48□□□□□ -0.89
PAX6-280ENST00000640872 Q8IZM0 81 aa9.48□□□□□ -0.89
PAX6-280ENST00000640872 TMEM86BQ8N661 226 aa9.48□□□□□ -0.89
PAX6-280ENST00000640872 C19orf73Q9NVV2 129 aa9.48□□□□□ -0.89
PAX6-280ENST00000640872 JMJD7-PLA2G4BH0Y9G9 81 aa9.47□□□□□ -0.89
PAX6-280ENST00000640872 Q8N814 137 aa9.47□□□□□ -0.89
PAX6-280ENST00000640872 XCL1P47992 114 aa9.46□□□□□ -0.89
PAX6-280ENST00000640872 S100A7L2Q5SY68 101 aa9.45□□□□□ -0.9
PAX6-280ENST00000640872 ATP5EP2Q5VTU8 51 aa9.45□□□□□ -0.9
PAX6-280ENST00000640872 PRR3P79522 188 aaKnown RBP9.44□□□□□ -0.9
PAX6-280ENST00000640872 KIR2DL5BQ8NHK3 375 aa9.44□□□□□ -0.9
PAX6-280ENST00000640872 DPH3Q96FX2 82 aa9.44□□□□□ -0.9
PAX6-280ENST00000640872 TENM1Q9UKZ4 2725 aa9.44□□□□□ -0.9
PAX6-280ENST00000640872 HIVEP2P31629 2446 aa9.44□□□□□ -0.9
PAX6-280ENST00000640872 A0A1B0GUV1 79 aa9.44□□□□□ -0.9
PAX6-280ENST00000640872 TMEM256-PLSCR3K7ERE1 68 aa9.44□□□□□ -0.9
PAX6-280ENST00000640872 NDUFC2O95298 119 aa9.44□□□□□ -0.9
PAX6-280ENST00000640872 HILS1P60008 231 aa9.44□□□□□ -0.9
PAX6-280ENST00000640872 LYPD5Q6UWN5 251 aa9.44□□□□□ -0.9
PAX6-280ENST00000640872 SMR3AQ99954 134 aa9.43□□□□□ -0.9
PAX6-280ENST00000640872 SMIM9A6NGZ8 99 aa9.42□□□□□ -0.9
PAX6-280ENST00000640872 IGLV1-51P01701 117 aa9.42□□□□□ -0.9
PAX6-280ENST00000640872 FN1P02751 2386 aaKnown RBP9.42□□□□□ -0.9
PAX6-280ENST00000640872 KIAA0087Q14695 138 aa9.42□□□□□ -0.9
PAX6-280ENST00000640872 CLPSL2Q6UWE3 100 aa9.41□□□□□ -0.9
PAX6-280ENST00000640872 WFDC9Q8NEX5 89 aa9.41□□□□□ -0.9
PAX6-280ENST00000640872 GYPEP15421 78 aa9.41□□□□□ -0.9
PAX6-280ENST00000640872 LINC00612Q8N6U2 182 aa9.41□□□□□ -0.9
PAX6-280ENST00000640872 DEFB130BP0DP73 79 aa9.4□□□□□ -0.9
PAX6-280ENST00000640872 DEFB130AP0DP74 79 aa9.4□□□□□ -0.9
PAX6-280ENST00000640872 COX17Q14061 63 aa9.4□□□□□ -0.9
PAX6-280ENST00000640872 NBEAL2Q6ZNJ1 2754 aa9.4□□□□□ -0.91
PAX6-280ENST00000640872 OXTP01178 125 aa9.39□□□□□ -0.91
PAX6-280ENST00000640872 GHRHP01286 108 aa9.39□□□□□ -0.91
PAX6-280ENST00000640872 C5orf47Q569G3 176 aa9.39□□□□□ -0.91
PAX6-280ENST00000640872 FAM19A1Q7Z5A9 133 aa9.39□□□□□ -0.91
PAX6-280ENST00000640872 DSCR8Q96T75 97 aa9.39□□□□□ -0.91
PAX6-280ENST00000640872 NSD1Q96L73 2696 aaPredicted RBP9.39□□□□□ -0.91
PAX6-280ENST00000640872 TRBV10-3A0A0K0K1G6 114 aa9.39□□□□□ -0.91
PAX6-280ENST00000640872 ENHOQ6UWT2 76 aa9.38□□□□□ -0.91
PAX6-280ENST00000640872 Q8NDZ9 215 aa9.38□□□□□ -0.91
PAX6-280ENST00000640872 TRAV23DV6A0A075B6W5 121 aa9.38□□□□□ -0.91
PAX6-280ENST00000640872 C6orf99Q4VX62 202 aa9.38□□□□□ -0.91
PAX6-280ENST00000640872 LINC01006Q8NI28 216 aa9.38□□□□□ -0.91
PAX6-280ENST00000640872 IGHV4-28A0A0C4DH34 117 aa9.37□□□□□ -0.91
PAX6-280ENST00000640872 HIVEP1P15822 2718 aa9.37□□□□□ -0.91
PAX6-280ENST00000640872 CD164L2Q6UWJ8 174 aa9.37□□□□□ -0.91
PAX6-280ENST00000640872 UBL5Q9BZL1 73 aa9.37□□□□□ -0.91
PAX6-280ENST00000640872 TRRAPQ9Y4A5 3859 aa9.36□□□□□ -0.91
PAX6-280ENST00000640872 LINC00575Q6W349 94 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms