RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 FAM19A3Q7Z5A8 133 aa11.65□□□□□ -0.54
VPS72-207ENST00000640458 RNF213Q63HN8 5207 aa11.64□□□□□ -0.55
VPS72-207ENST00000640458 A0A0J9YXV3 536 aa11.64□□□□□ -0.55
VPS72-207ENST00000640458 PLNP26678 52 aa11.64□□□□□ -0.55
VPS72-207ENST00000640458 ODF1Q14990 250 aa11.64□□□□□ -0.55
VPS72-207ENST00000640458 MRPL35Q9NZE8 188 aaKnown RBP11.64□□□□□ -0.55
VPS72-207ENST00000640458 H3BRM9 83 aa11.63□□□□□ -0.55
VPS72-207ENST00000640458 DPM2O94777 84 aa11.63□□□□□ -0.55
VPS72-207ENST00000640458 IGLC3P0DOY3 106 aa11.63□□□□□ -0.55
VPS72-207ENST00000640458 LINC00242Q5T6M2 205 aa11.63□□□□□ -0.55
VPS72-207ENST00000640458 COX7A2LO14548 114 aa11.62□□□□□ -0.55
VPS72-207ENST00000640458 IGKCP01834 107 aa11.62□□□□□ -0.55
VPS72-207ENST00000640458 LINC01545Q5VT33 79 aa11.62□□□□□ -0.55
VPS72-207ENST00000640458 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.62□□□□□ -0.55
VPS72-207ENST00000640458 SCGB1D1O95968 90 aa11.61□□□□□ -0.55
VPS72-207ENST00000640458 MALP21145 153 aa11.61□□□□□ -0.55
VPS72-207ENST00000640458 HNRNPA3P51991 378 aaKnown RBP11.61□□□□□ -0.55
VPS72-207ENST00000640458 RPL37AP61513 92 aaKnown RBP11.61□□□□□ -0.55
VPS72-207ENST00000640458 TMEM170BQ5T4T1 132 aa11.61□□□□□ -0.55
VPS72-207ENST00000640458 LINC00469Q8N7U9 141 aa11.61□□□□□ -0.55
VPS72-207ENST00000640458 PANO1I0J062 215 aa11.6□□□□□ -0.55
VPS72-207ENST00000640458 APOMO95445 188 aa11.6□□□□□ -0.55
VPS72-207ENST00000640458 CIRBPQ14011 172 aaKnown RBP11.6□□□□□ -0.55
VPS72-207ENST00000640458 PMCHL2Q9BQD1 86 aa11.6□□□□□ -0.55
VPS72-207ENST00000640458 IGLV4-69A0A075B6H9 119 aa11.59□□□□□ -0.55
VPS72-207ENST00000640458 MT1HL1P0DM35 61 aa11.59□□□□□ -0.55
VPS72-207ENST00000640458 C5orf38Q86SI9 138 aa11.59□□□□□ -0.55
VPS72-207ENST00000640458 C11orf86A6NJI1 115 aa11.58□□□□□ -0.56
VPS72-207ENST00000640458 ZNF561-AS1K7EIQ3 104 aa11.58□□□□□ -0.56
VPS72-207ENST00000640458 HERVK_113P61574 105 aa11.58□□□□□ -0.56
VPS72-207ENST00000640458 COX6A2Q02221 97 aa11.58□□□□□ -0.56
VPS72-207ENST00000640458 LINC00526Q96FQ7 95 aa11.58□□□□□ -0.56
VPS72-207ENST00000640458 IGHV3OR16-9A0A0B4J2B5 98 aa11.57□□□□□ -0.56
VPS72-207ENST00000640458 LINC01561Q8N1V8 128 aa11.57□□□□□ -0.56
VPS72-207ENST00000640458 LRP2P98164 4655 aa11.57□□□□□ -0.56
VPS72-207ENST00000640458 IGLV5-45A0A087WSX0 123 aa11.56□□□□□ -0.56
VPS72-207ENST00000640458 A0A087WZ39 114 aa11.56□□□□□ -0.56
VPS72-207ENST00000640458 ZNF22P17026 224 aaPredicted RBP11.56□□□□□ -0.56
VPS72-207ENST00000640458 CARD19Q96LW7 228 aa11.56□□□□□ -0.56
VPS72-207ENST00000640458 CDKN2A-AS1Q9UH64 79 aa11.56□□□□□ -0.56
VPS72-207ENST00000640458 CHTF8P0CG12 524 aa11.55□□□□□ -0.56
VPS72-207ENST00000640458 SYCNQ0VAF6 134 aa11.55□□□□□ -0.56
VPS72-207ENST00000640458 JOSD1Q15040 202 aaPredicted RBP11.55□□□□□ -0.56
VPS72-207ENST00000640458 SPACA4Q8TDM5 124 aa11.55□□□□□ -0.56
VPS72-207ENST00000640458 HSBP1L1C9JCN9 74 aa11.54□□□□□ -0.56
VPS72-207ENST00000640458 DPH3Q96FX2 82 aa11.53□□□□□ -0.56
VPS72-207ENST00000640458 C2orf48Q96LS8 159 aa11.53□□□□□ -0.56
VPS72-207ENST00000640458 PKIGQ9Y2B9 76 aa11.53□□□□□ -0.56
VPS72-207ENST00000640458 PKHD1L1Q86WI1 4243 aa11.52□□□□□ -0.56
VPS72-207ENST00000640458 A0A087WYN8 130 aa11.52□□□□□ -0.57
VPS72-207ENST00000640458 PRSS2P07478 247 aa11.52□□□□□ -0.57
VPS72-207ENST00000640458 SPINK8P0C7L1 97 aa11.51□□□□□ -0.57
VPS72-207ENST00000640458 SPAG11BQ08648 103 aa11.51□□□□□ -0.57
VPS72-207ENST00000640458 Q6ZRU5 148 aa11.51□□□□□ -0.57
VPS72-207ENST00000640458 CAMK2N2Q96S95 79 aa11.51□□□□□ -0.57
VPS72-207ENST00000640458 TMEM223A0PJW6 202 aa11.5□□□□□ -0.57
VPS72-207ENST00000640458 ATOH7Q8N100 152 aa11.5□□□□□ -0.57
VPS72-207ENST00000640458 ORAOV1Q8WV07 137 aa11.5□□□□□ -0.57
VPS72-207ENST00000640458 PLAC8Q9NZF1 115 aa11.5□□□□□ -0.57
VPS72-207ENST00000640458 A0A096LNI7 61 aa11.49□□□□□ -0.57
VPS72-207ENST00000640458 IGKV2-24A0A0C4DH68 120 aa11.49□□□□□ -0.57
VPS72-207ENST00000640458 F8WDY8 70 aa11.49□□□□□ -0.57
VPS72-207ENST00000640458 TOMM7Q9P0U1 55 aa11.49□□□□□ -0.57
VPS72-207ENST00000640458 LOC105371267A0A1B0GV96 52 aa11.48□□□□□ -0.57
VPS72-207ENST00000640458 SMIM1B2RUZ4 78 aa11.48□□□□□ -0.57
VPS72-207ENST00000640458 MAJINQ3KP22 176 aa11.48□□□□□ -0.57
VPS72-207ENST00000640458 C6orf226Q5I0X4 101 aa11.48□□□□□ -0.57
VPS72-207ENST00000640458 PLEKHB2Q96CS7 222 aa11.48□□□□□ -0.57
VPS72-207ENST00000640458 LINC00474Q9P2X8 69 aa11.48□□□□□ -0.57
VPS72-207ENST00000640458 LOC107984640A0A0U1RRK4 108 aa11.46□□□□□ -0.57
VPS72-207ENST00000640458 S100A12P80511 92 aa11.46□□□□□ -0.57
VPS72-207ENST00000640458 RNF151Q2KHN1 245 aa11.46□□□□□ -0.57
VPS72-207ENST00000640458 PYY3Q5JQD4 70 aa11.46□□□□□ -0.57
VPS72-207ENST00000640458 Q8IZM0 81 aa11.46□□□□□ -0.57
VPS72-207ENST00000640458 STPG4Q8N801 248 aa11.46□□□□□ -0.57
VPS72-207ENST00000640458 COX7B2Q8TF08 81 aa11.46□□□□□ -0.57
VPS72-207ENST00000640458 E9PLD3 99 aa11.45□□□□□ -0.58
VPS72-207ENST00000640458 LEPROTO15243 131 aa11.45□□□□□ -0.58
VPS72-207ENST00000640458 CKS1BP61024 79 aa11.45□□□□□ -0.58
VPS72-207ENST00000640458 VAMP8Q9BV40 100 aa11.45□□□□□ -0.58
VPS72-207ENST00000640458 IGLV5-39A0A0G2JS06 123 aa11.44□□□□□ -0.58
VPS72-207ENST00000640458 LGALS3P17931 250 aaKnown RBP11.44□□□□□ -0.58
VPS72-207ENST00000640458 CXCL5P42830 114 aa11.44□□□□□ -0.58
VPS72-207ENST00000640458 PTTG1IPP53801 180 aa11.44□□□□□ -0.58
VPS72-207ENST00000640458 KIAA0087Q14695 138 aa11.44□□□□□ -0.58
VPS72-207ENST00000640458 SFTA2Q6UW10 78 aa11.44□□□□□ -0.58
VPS72-207ENST00000640458 NDUFA1O15239 70 aa11.43□□□□□ -0.58
VPS72-207ENST00000640458 SMIM6P0DI80 62 aa11.42□□□□□ -0.58
VPS72-207ENST00000640458 GAGE2BQ13066 116 aa11.42□□□□□ -0.58
VPS72-207ENST00000640458 J3QQQ9 107 aa11.41□□□□□ -0.58
VPS72-207ENST00000640458 NMUP48645 174 aa11.41□□□□□ -0.58
VPS72-207ENST00000640458 C10orf25Q5T742 122 aa11.41□□□□□ -0.58
VPS72-207ENST00000640458 UNQ6190/PRO20217Q6UXQ8 127 aa11.41□□□□□ -0.58
VPS72-207ENST00000640458 TNXBP22105 4242 aa11.4□□□□□ -0.59
VPS72-207ENST00000640458 MYMXA0A1B0GTQ4 84 aa11.39□□□□□ -0.59
VPS72-207ENST00000640458 SPATA45Q537H7 98 aa11.39□□□□□ -0.59
VPS72-207ENST00000640458 C7orf33Q8WU49 177 aa11.39□□□□□ -0.59
VPS72-207ENST00000640458 C6orf48Q9UBA6 75 aa11.39□□□□□ -0.59
VPS72-207ENST00000640458 PAM16Q9Y3D7 125 aa11.39□□□□□ -0.59
VPS72-207ENST00000640458 TLX1NBP0CAT3 122 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms