RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 H3BQ85 93 aa10.28□□□□□ -0.76
SCARB2-216ENST00000639300 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.28□□□□□ -0.76
SCARB2-216ENST00000639300 NDUFS5O43920 106 aa10.28□□□□□ -0.76
SCARB2-216ENST00000639300 SHISA2Q6UWI4 295 aa10.28□□□□□ -0.76
SCARB2-216ENST00000639300 ENHOQ6UWT2 76 aa10.28□□□□□ -0.76
SCARB2-216ENST00000639300 UPK3BQ9BT76 320 aa10.28□□□□□ -0.76
SCARB2-216ENST00000639300 RETNQ9HD89 108 aa10.27□□□□□ -0.76
SCARB2-216ENST00000639300 FRYQ5TBA9 3013 aa10.27□□□□□ -0.77
SCARB2-216ENST00000639300 A0A087WZ39 114 aa10.27□□□□□ -0.77
SCARB2-216ENST00000639300 Q8IZM0 81 aa10.27□□□□□ -0.77
SCARB2-216ENST00000639300 C20orf197Q8N268 126 aa10.27□□□□□ -0.77
SCARB2-216ENST00000639300 FAM19A4Q96LR4 140 aa10.26□□□□□ -0.77
SCARB2-216ENST00000639300 C11orf72Q8NBR9 251 aa10.26□□□□□ -0.77
SCARB2-216ENST00000639300 HELZ2Q9BYK8 2649 aaKnown RBP10.26□□□□□ -0.77
SCARB2-216ENST00000639300 NANOS2P60321 138 aaKnown RBP10.26□□□□□ -0.77
SCARB2-216ENST00000639300 CSDC2Q9Y534 153 aaKnown RBP10.26□□□□□ -0.77
SCARB2-216ENST00000639300 FAM19A5Q7Z5A7 132 aaPredicted RBP10.25□□□□□ -0.77
SCARB2-216ENST00000639300 BPY2O14599 106 aa10.25□□□□□ -0.77
SCARB2-216ENST00000639300 NBEAQ8NFP9 2946 aa10.24□□□□□ -0.77
SCARB2-216ENST00000639300 EYSQ5T1H1 3165 aa10.23□□□□□ -0.77
SCARB2-216ENST00000639300 CHD6Q8TD26 2715 aa10.23□□□□□ -0.77
SCARB2-216ENST00000639300 CCKP06307 115 aa10.23□□□□□ -0.77
SCARB2-216ENST00000639300 LINC01546A6NGU7 62 aa10.22□□□□□ -0.77
SCARB2-216ENST00000639300 A0A0J9YWU9 116 aa10.22□□□□□ -0.77
SCARB2-216ENST00000639300 NTM-AS1Q6ZSK4 140 aa10.21□□□□□ -0.77
SCARB2-216ENST00000639300 C3orf84H3BNL1 204 aa10.21□□□□□ -0.78
SCARB2-216ENST00000639300 UQCRQO14949 82 aa10.21□□□□□ -0.78
SCARB2-216ENST00000639300 FAM19A1Q7Z5A9 133 aa10.21□□□□□ -0.78
SCARB2-216ENST00000639300 KLK5Q9Y337 293 aaPredicted RBP10.21□□□□□ -0.78
SCARB2-216ENST00000639300 FRYLO94915 3013 aa10.21□□□□□ -0.78
SCARB2-216ENST00000639300 TRAV10A0A0B4J240 114 aa10.2□□□□□ -0.78
SCARB2-216ENST00000639300 C16orf95Q9H693 158 aa10.2□□□□□ -0.78
SCARB2-216ENST00000639300 RPL37AP8A6NKH3 93 aa10.19□□□□□ -0.78
SCARB2-216ENST00000639300 RPL28P46779 137 aaKnown RBP10.19□□□□□ -0.78
SCARB2-216ENST00000639300 BOD1L1Q8NFC6 3051 aa10.19□□□□□ -0.78
SCARB2-216ENST00000639300 Q6ZTC4 211 aa10.19□□□□□ -0.78
SCARB2-216ENST00000639300 NDUFB1O75438 58 aa10.19□□□□□ -0.78
SCARB2-216ENST00000639300 Q8N2B8 174 aa10.19□□□□□ -0.78
SCARB2-216ENST00000639300 A0A087WYN8 130 aa10.18□□□□□ -0.78
SCARB2-216ENST00000639300 ZNF73O43830 326 aaPredicted RBP10.18□□□□□ -0.78
SCARB2-216ENST00000639300 C6orf223Q8N319 242 aa10.18□□□□□ -0.78
SCARB2-216ENST00000639300 WFDC9Q8NEX5 89 aa10.18□□□□□ -0.78
SCARB2-216ENST00000639300 USP17L23D6RBM5 183 aa10.17□□□□□ -0.78
SCARB2-216ENST00000639300 CCDC179H3BU77 68 aa10.17□□□□□ -0.78
SCARB2-216ENST00000639300 M0R378 163 aa10.17□□□□□ -0.78
SCARB2-216ENST00000639300 COX17Q14061 63 aa10.17□□□□□ -0.78
SCARB2-216ENST00000639300 J3KT08 172 aa10.16□□□□□ -0.78
SCARB2-216ENST00000639300 MP68P56378 58 aa10.16□□□□□ -0.78
SCARB2-216ENST00000639300 TRBV10-3A0A0K0K1G6 114 aa10.16□□□□□ -0.78
SCARB2-216ENST00000639300 PKIGQ9Y2B9 76 aa10.16□□□□□ -0.78
SCARB2-216ENST00000639300 H0Y9J4 135 aa10.16□□□□□ -0.78
SCARB2-216ENST00000639300 TMEM258P61165 79 aa10.16□□□□□ -0.78
SCARB2-216ENST00000639300 LINC00337Q8N6G1 96 aa10.16□□□□□ -0.78
SCARB2-216ENST00000639300 A8MTW9 85 aa10.14□□□□□ -0.79
SCARB2-216ENST00000639300 IMUPQ9GZP8 106 aa10.14□□□□□ -0.79
SCARB2-216ENST00000639300 C3orf22Q8N5N4 141 aa10.14□□□□□ -0.79
SCARB2-216ENST00000639300 TEP1Q99973 2627 aaKnown RBP10.14□□□□□ -0.79
SCARB2-216ENST00000639300 PPDPFQ9H3Y8 114 aa10.14□□□□□ -0.79
SCARB2-216ENST00000639300 IGHV3OR16-9A0A0B4J2B5 98 aa10.13□□□□□ -0.79
SCARB2-216ENST00000639300 A0A1B0GUV1 79 aa10.13□□□□□ -0.79
SCARB2-216ENST00000639300 C14orf177Q52M58 125 aa10.13□□□□□ -0.79
SCARB2-216ENST00000639300 ATP5EP2Q5VTU8 51 aa10.13□□□□□ -0.79
SCARB2-216ENST00000639300 IGLV5-39A0A0G2JS06 123 aa10.12□□□□□ -0.79
SCARB2-216ENST00000639300 SMCPP49901 116 aaPredicted RBP10.12□□□□□ -0.79
SCARB2-216ENST00000639300 Q8N814 137 aa10.12□□□□□ -0.79
SCARB2-216ENST00000639300 A0A087WVE0 104 aa10.12□□□□□ -0.79
SCARB2-216ENST00000639300 KLK9Q2XQG4 91 aa10.12□□□□□ -0.79
SCARB2-216ENST00000639300 WFDC10BQ8IUB3 73 aa10.12□□□□□ -0.79
SCARB2-216ENST00000639300 M0R2N4 97 aa10.12□□□□□ -0.79
SCARB2-216ENST00000639300 FAM240AA0A1B0GVK7 77 aa10.11□□□□□ -0.79
SCARB2-216ENST00000639300 B9D2Q9BPU9 175 aa10.11□□□□□ -0.79
SCARB2-216ENST00000639300 FHL3Q13643 280 aa10.11□□□□□ -0.79
SCARB2-216ENST00000639300 EGFEM1PQ0D2K5 195 aa10.1□□□□□ -0.79
SCARB2-216ENST00000639300 SERP2Q8N6R1 65 aa10.09□□□□□ -0.79
SCARB2-216ENST00000639300 CELA1Q9UNI1 258 aa10.09□□□□□ -0.79
SCARB2-216ENST00000639300 CDIP1Q9H305 208 aa10.09□□□□□ -0.79
SCARB2-216ENST00000639300 LYPD5Q6UWN5 251 aa10.08□□□□□ -0.8
SCARB2-216ENST00000639300 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.08□□□□□ -0.8
SCARB2-216ENST00000639300 SOSTDC1Q6X4U4 206 aa10.07□□□□□ -0.8
SCARB2-216ENST00000639300 PRO0461Q9UI25 63 aa10.07□□□□□ -0.8
SCARB2-216ENST00000639300 SNURFQ9Y675 71 aa10.07□□□□□ -0.8
SCARB2-216ENST00000639300 C5orf47Q569G3 176 aa10.06□□□□□ -0.8
SCARB2-216ENST00000639300 COX7CP15954 63 aa10.06□□□□□ -0.8
SCARB2-216ENST00000639300 MUC7Q8TAX7 377 aa10.06□□□□□ -0.8
SCARB2-216ENST00000639300 FSHBP01225 129 aa10.05□□□□□ -0.8
SCARB2-216ENST00000639300 ADGRG4Q8IZF6 3080 aa10.05□□□□□ -0.8
SCARB2-216ENST00000639300 Q6Q795 121 aa10.04□□□□□ -0.8
SCARB2-216ENST00000639300 Q6JHZ5 121 aa10.04□□□□□ -0.8
SCARB2-216ENST00000639300 LRCOL1A6NCL2 159 aa10.04□□□□□ -0.8
SCARB2-216ENST00000639300 DHRS4-AS1Q9P1J3 65 aa10.04□□□□□ -0.8
SCARB2-216ENST00000639300 ATMQ13315 3056 aa10.03□□□□□ -0.8
SCARB2-216ENST00000639300 TEX15Q9BXT5 2789 aa10.03□□□□□ -0.8
SCARB2-216ENST00000639300 IGLV5-45A0A087WSX0 123 aa10.03□□□□□ -0.8
SCARB2-216ENST00000639300 Q8N3U1 123 aa10.03□□□□□ -0.8
SCARB2-216ENST00000639300 REV3LO60673 3130 aa10.03□□□□□ -0.8
SCARB2-216ENST00000639300 LOC107984640A0A0U1RRK4 108 aa10.03□□□□□ -0.8
SCARB2-216ENST00000639300 LINC00846Q9NV44 126 aa10.03□□□□□ -0.8
SCARB2-216ENST00000639300 FAM236DA0A1B0GTK5 79 aa10.02□□□□□ -0.81
SCARB2-216ENST00000639300 FAM236CP0DP71 79 aa10.02□□□□□ -0.81
SCARB2-216ENST00000639300 WFDC13Q8IUB5 93 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms