RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 ODF3Q96PU9 254 aa5.18□□□□□ -1.58
SCARB2-209ENST00000638409 RBAKDNA6NC62 111 aa5.18□□□□□ -1.58
SCARB2-209ENST00000638409 IGKCP01834 107 aa5.18□□□□□ -1.58
SCARB2-209ENST00000638409 LYRM7Q5U5X0 104 aa5.18□□□□□ -1.58
SCARB2-209ENST00000638409 TRBV25-1A0A075B6N4 114 aa5.17□□□□□ -1.58
SCARB2-209ENST00000638409 ZC2HC1BQ5TFG8 222 aa5.17□□□□□ -1.58
SCARB2-209ENST00000638409 Q6ZQT7 251 aa5.17□□□□□ -1.58
SCARB2-209ENST00000638409 LINC01546A6NGU7 62 aa5.16□□□□□ -1.58
SCARB2-209ENST00000638409 DPM2O94777 84 aa5.16□□□□□ -1.58
SCARB2-209ENST00000638409 C16orf74Q96GX8 76 aa5.16□□□□□ -1.58
SCARB2-209ENST00000638409 MRPL35Q9NZE8 188 aaKnown RBP5.16□□□□□ -1.58
SCARB2-209ENST00000638409 HIGD1BQ9P298 99 aa5.16□□□□□ -1.58
SCARB2-209ENST00000638409 A0A1B0GVX0 72 aa5.16□□□□□ -1.58
SCARB2-209ENST00000638409 IGKV2-30P06310 120 aa5.16□□□□□ -1.58
SCARB2-209ENST00000638409 IGKV3D-20A0A0C4DH25 116 aa5.16□□□□□ -1.58
SCARB2-209ENST00000638409 LOC107984640A0A0U1RRK4 108 aa5.16□□□□□ -1.58
SCARB2-209ENST00000638409 IGLL5B9A064 214 aa5.16□□□□□ -1.58
SCARB2-209ENST00000638409 IGKV3-20P01619 116 aa5.16□□□□□ -1.58
SCARB2-209ENST00000638409 Q1RN00 199 aa5.16□□□□□ -1.58
SCARB2-209ENST00000638409 DEFB135Q30KP9 77 aa5.16□□□□□ -1.58
SCARB2-209ENST00000638409 Q8N8P6 123 aa5.16□□□□□ -1.58
SCARB2-209ENST00000638409 AGPAT4-IT1Q9H0P7 198 aa5.16□□□□□ -1.58
SCARB2-209ENST00000638409 NXT2Q9NPJ8 142 aaKnown RBP5.16□□□□□ -1.58
SCARB2-209ENST00000638409 LENEPQ9Y5L5 61 aa5.16□□□□□ -1.58
SCARB2-209ENST00000638409 IGLV2-18A0A075B6J9 118 aa5.15□□□□□ -1.58
SCARB2-209ENST00000638409 TRBV20-1A0A075B6N2 111 aa5.15□□□□□ -1.58
SCARB2-209ENST00000638409 ATP6V0E2Q8NHE4 81 aa5.15□□□□□ -1.59
SCARB2-209ENST00000638409 CNFNQ9BYD5 112 aa5.15□□□□□ -1.59
SCARB2-209ENST00000638409 TGP01266 2768 aa5.14□□□□□ -1.59
SCARB2-209ENST00000638409 SLPIP03973 132 aa5.14□□□□□ -1.59
SCARB2-209ENST00000638409 RPL36AP83881 106 aaKnown RBP5.14□□□□□ -1.59
SCARB2-209ENST00000638409 CIRBP-AS1Q8TBR5 109 aa5.14□□□□□ -1.59
SCARB2-209ENST00000638409 DNAH7Q8WXX0 4024 aa5.14□□□□□ -1.59
SCARB2-209ENST00000638409 MIFP14174 115 aa5.14□□□□□ -1.59
SCARB2-209ENST00000638409 SPINK13Q1W4C9 94 aa5.14□□□□□ -1.59
SCARB2-209ENST00000638409 NBEAL2Q6ZNJ1 2754 aa5.13□□□□□ -1.59
SCARB2-209ENST00000638409 KRTAP19-4Q3LI73 84 aa5.13□□□□□ -1.59
SCARB2-209ENST00000638409 C9orf129Q5T035 196 aaKnown RBP5.13□□□□□ -1.59
SCARB2-209ENST00000638409 C14orf178Q8N769 122 aaPredicted RBP5.13□□□□□ -1.59
SCARB2-209ENST00000638409 DAND5Q8N907 189 aa5.13□□□□□ -1.59
SCARB2-209ENST00000638409 OPRPNQ99935 248 aaPredicted RBP5.13□□□□□ -1.59
SCARB2-209ENST00000638409 TENM3Q9P273 2699 aa5.13□□□□□ -1.59
SCARB2-209ENST00000638409 H3BVH4 76 aa5.13□□□□□ -1.59
SCARB2-209ENST00000638409 Q8NAQ8 132 aa5.13□□□□□ -1.59
SCARB2-209ENST00000638409 TYMSOSQ8TAI1 123 aa5.13□□□□□ -1.59
SCARB2-209ENST00000638409 LINC00467Q9BRT7 94 aa5.13□□□□□ -1.59
SCARB2-209ENST00000638409 MEIG1Q5JSS6 88 aa5.12□□□□□ -1.59
SCARB2-209ENST00000638409 PRR9Q5T870 116 aa5.12□□□□□ -1.59
SCARB2-209ENST00000638409 ZFAND2AQ8N6M9 145 aa5.12□□□□□ -1.59
SCARB2-209ENST00000638409 TRBV7-3A0A075B6L6 115 aa5.11□□□□□ -1.59
SCARB2-209ENST00000638409 TRAV12-2A0A075B6T6 113 aa5.11□□□□□ -1.59
SCARB2-209ENST00000638409 IFITM1P13164 125 aa5.11□□□□□ -1.59
SCARB2-209ENST00000638409 RRN3P1Q2M238 152 aa5.11□□□□□ -1.59
SCARB2-209ENST00000638409 SPANXN1Q5VSR9 72 aa5.11□□□□□ -1.59
SCARB2-209ENST00000638409 Q5XG85 94 aa5.11□□□□□ -1.59
SCARB2-209ENST00000638409 SFTA2Q6UW10 78 aa5.11□□□□□ -1.59
SCARB2-209ENST00000638409 KTN1-AS1Q86SY8 53 aa5.11□□□□□ -1.59
SCARB2-209ENST00000638409 DEFB104AQ8WTQ1 72 aa5.11□□□□□ -1.59
SCARB2-209ENST00000638409 ZNF73O43830 326 aaPredicted RBP5.11□□□□□ -1.59
SCARB2-209ENST00000638409 CFAP126Q5VTH2 177 aa5.11□□□□□ -1.59
SCARB2-209ENST00000638409 RPL39LQ96EH5 51 aaKnown RBP5.11□□□□□ -1.59
SCARB2-209ENST00000638409 A0A0J9YWU9 116 aa5.1□□□□□ -1.59
SCARB2-209ENST00000638409 PLNP26678 52 aa5.1□□□□□ -1.59
SCARB2-209ENST00000638409 POM121L12Q8N7R1 296 aa5.1□□□□□ -1.59
SCARB2-209ENST00000638409 PPDPFLQ8WWR9 84 aa5.1□□□□□ -1.59
SCARB2-209ENST00000638409 SMIM2Q9BVW6 85 aa5.1□□□□□ -1.59
SCARB2-209ENST00000638409 PHLDA3Q9Y5J5 127 aa5.1□□□□□ -1.59
SCARB2-209ENST00000638409 IGLV1-50A0A075B6I6 118 aa5.1□□□□□ -1.59
SCARB2-209ENST00000638409 MYMXA0A1B0GTQ4 84 aa5.1□□□□□ -1.59
SCARB2-209ENST00000638409 H7C423 109 aa5.1□□□□□ -1.59
SCARB2-209ENST00000638409 RNASE4P34096 147 aaKnown RBP5.1□□□□□ -1.59
SCARB2-209ENST00000638409 SYCNQ0VAF6 134 aa5.1□□□□□ -1.59
SCARB2-209ENST00000638409 SCXQ7RTU7 201 aa5.1□□□□□ -1.59
SCARB2-209ENST00000638409 SCGB3A1Q96QR1 104 aa5.1□□□□□ -1.59
SCARB2-209ENST00000638409 TRAV12-3A0A0B4J271 114 aa5.1□□□□□ -1.59
SCARB2-209ENST00000638409 F8VRH5 84 aa5.1□□□□□ -1.59
SCARB2-209ENST00000638409 MGPP08493 103 aa5.1□□□□□ -1.59
SCARB2-209ENST00000638409 C15orf56Q8N910 161 aa5.1□□□□□ -1.59
SCARB2-209ENST00000638409 J3QQQ9 107 aa5.09□□□□□ -1.59
SCARB2-209ENST00000638409 STAB2Q8WWQ8 2551 aa5.09□□□□□ -1.6
SCARB2-209ENST00000638409 TMEM263Q8WUH6 116 aaKnown RBP5.09□□□□□ -1.6
SCARB2-209ENST00000638409 TOMM6Q96B49 74 aa5.09□□□□□ -1.6
SCARB2-209ENST00000638409 PRADC1Q9BSG0 188 aa5.09□□□□□ -1.6
SCARB2-209ENST00000638409 LINC00694P0DN24 101 aa5.08□□□□□ -1.6
SCARB2-209ENST00000638409 NTM-AS1Q6ZSK4 140 aa5.08□□□□□ -1.6
SCARB2-209ENST00000638409 SPANXCQ9NY87 97 aa5.08□□□□□ -1.6
SCARB2-209ENST00000638409 TRAV12-1A0A0B4J245 112 aa5.08□□□□□ -1.6
SCARB2-209ENST00000638409 TRAV21A0A0B4J279 112 aa5.08□□□□□ -1.6
SCARB2-209ENST00000638409 ZNF815PA8K554 130 aa5.08□□□□□ -1.6
SCARB2-209ENST00000638409 C3orf84H3BNL1 204 aa5.08□□□□□ -1.6
SCARB2-209ENST00000638409 NDUFAF8A1L188 74 aa5.07□□□□□ -1.6
SCARB2-209ENST00000638409 LINC01549A6NIU2 74 aa5.07□□□□□ -1.6
SCARB2-209ENST00000638409 TMEM262E9PQX1 116 aa5.07□□□□□ -1.6
SCARB2-209ENST00000638409 SNCGO76070 127 aa5.07□□□□□ -1.6
SCARB2-209ENST00000638409 SPART-AS1P0CW21 52 aa5.07□□□□□ -1.6
SCARB2-209ENST00000638409 TEN1Q86WV5 123 aa5.07□□□□□ -1.6
SCARB2-209ENST00000638409 MUC7Q8TAX7 377 aa5.07□□□□□ -1.6
SCARB2-209ENST00000638409 MDFICQ9P1T7 246 aa5.07□□□□□ -1.6
SCARB2-209ENST00000638409 CSMD3Q7Z407 3707 aa5.07□□□□□ -1.6
SCARB2-209ENST00000638409 MUC4Q99102 2169 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms