RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 E7EUB6 86 aa14.22□□□□□ -0.13
CACNA1A-257ENST00000638009 C1orf64Q8NEQ6 169 aa14.22□□□□□ -0.13
CACNA1A-257ENST00000638009 RETNLBQ9BQ08 111 aa14.21□□□□□ -0.13
CACNA1A-257ENST00000638009 PLA2G2CQ5R387 149 aa14.21□□□□□ -0.13
CACNA1A-257ENST00000638009 PIP4P1Q86T03 277 aa14.21□□□□□ -0.14
CACNA1A-257ENST00000638009 PRLHP81277 87 aa14.2□□□□□ -0.14
CACNA1A-257ENST00000638009 IGLV2-8P01709 118 aa14.2□□□□□ -0.14
CACNA1A-257ENST00000638009 H3BPC8 53 aa14.19□□□□□ -0.14
CACNA1A-257ENST00000638009 Q8N7P7 452 aa14.19□□□□□ -0.14
CACNA1A-257ENST00000638009 Q9BRP9 147 aa14.19□□□□□ -0.14
CACNA1A-257ENST00000638009 ZFP36P26651 326 aaKnown RBP14.19□□□□□ -0.14
CACNA1A-257ENST00000638009 BCE1O60756 84 aa14.19□□□□□ -0.14
CACNA1A-257ENST00000638009 CYSRT1A8MQ03 144 aa14.18□□□□□ -0.14
CACNA1A-257ENST00000638009 PCOTHQ58A44 107 aa14.17□□□□□ -0.14
CACNA1A-257ENST00000638009 PRM2P04554 102 aa14.17□□□□□ -0.14
CACNA1A-257ENST00000638009 MBD6Q96DN6 1003 aa14.17□□□□□ -0.14
CACNA1A-257ENST00000638009 Q6YL49 198 aa14.17□□□□□ -0.14
CACNA1A-257ENST00000638009 DEFB1P60022 68 aa14.17□□□□□ -0.14
CACNA1A-257ENST00000638009 SBSPONQ8IVN8 264 aa14.17□□□□□ -0.14
CACNA1A-257ENST00000638009 RNASE3P12724 160 aaKnown RBP14.17□□□□□ -0.14
CACNA1A-257ENST00000638009 CDC42SE2Q9NRR3 84 aa14.16□□□□□ -0.14
CACNA1A-257ENST00000638009 ATP11AUNQ6ZP68 121 aa14.16□□□□□ -0.14
CACNA1A-257ENST00000638009 C11orf1Q9H5F2 150 aa14.15□□□□□ -0.14
CACNA1A-257ENST00000638009 U3KQA8 63 aa14.14□□□□□ -0.15
CACNA1A-257ENST00000638009 KLLNB2CW77 178 aa14.14□□□□□ -0.15
CACNA1A-257ENST00000638009 PLA2G2EQ9NZK7 142 aa14.14□□□□□ -0.15
CACNA1A-257ENST00000638009 C6orf48Q9UBA6 75 aa14.14□□□□□ -0.15
CACNA1A-257ENST00000638009 GRNP28799 593 aaKnown RBP14.13□□□□□ -0.15
CACNA1A-257ENST00000638009 BBC3Q96PG8 261 aaPredicted RBP14.13□□□□□ -0.15
CACNA1A-257ENST00000638009 FRMD6-AS1P0C7T7 363 aa14.13□□□□□ -0.15
CACNA1A-257ENST00000638009 SPRNQ5BIV9 151 aa14.12□□□□□ -0.15
CACNA1A-257ENST00000638009 LINC00337Q8N6G1 96 aa14.12□□□□□ -0.15
CACNA1A-257ENST00000638009 MSMPQ1L6U9 139 aa14.12□□□□□ -0.15
CACNA1A-257ENST00000638009 COL4A4P53420 1690 aaPredicted RBP14.12□□□□□ -0.15
CACNA1A-257ENST00000638009 Q8N2B8 174 aa14.11□□□□□ -0.15
CACNA1A-257ENST00000638009 C2orf48Q96LS8 159 aa14.11□□□□□ -0.15
CACNA1A-257ENST00000638009 LINC01561Q8N1V8 128 aa14.11□□□□□ -0.15
CACNA1A-257ENST00000638009 POLR2KP53803 58 aaKnown RBP14.11□□□□□ -0.15
CACNA1A-257ENST00000638009 IGLV5-52A0A0A0MRZ9 124 aa14.1□□□□□ -0.15
CACNA1A-257ENST00000638009 IGKV2D-30A0A075B6S6 120 aa14.09□□□□□ -0.15
CACNA1A-257ENST00000638009 IGKV2-30P06310 120 aa14.09□□□□□ -0.15
CACNA1A-257ENST00000638009 COL4A6Q14031 1691 aa14.09□□□□□ -0.15
CACNA1A-257ENST00000638009 CRIP1P50238 77 aa14.08□□□□□ -0.16
CACNA1A-257ENST00000638009 Q6ZS46 218 aa14.07□□□□□ -0.16
CACNA1A-257ENST00000638009 LINC00482Q8N8I6 264 aa14.06□□□□□ -0.16
CACNA1A-257ENST00000638009 LY6G6CO95867 125 aa14.05□□□□□ -0.16
CACNA1A-257ENST00000638009 IGLV2-18A0A075B6J9 118 aa14.05□□□□□ -0.16
CACNA1A-257ENST00000638009 A0A087WSZ3 146 aa14.05□□□□□ -0.16
CACNA1A-257ENST00000638009 ADORA2A-AS1P86434 159 aa14.05□□□□□ -0.16
CACNA1A-257ENST00000638009 A0A087WYN8 130 aa14.04□□□□□ -0.16
CACNA1A-257ENST00000638009 AKAP13Q12802 2813 aa14.04□□□□□ -0.16
CACNA1A-257ENST00000638009 PSMG3-AS1Q96PY0 264 aa14.04□□□□□ -0.16
CACNA1A-257ENST00000638009 CRIPTQ9P021 101 aa14.04□□□□□ -0.16
CACNA1A-257ENST00000638009 IGIPA6NJ69 53 aa14.04□□□□□ -0.16
CACNA1A-257ENST00000638009 TRAV22A0A0B4J277 110 aa14.03□□□□□ -0.16
CACNA1A-257ENST00000638009 A0A1B0GUV1 79 aa14.03□□□□□ -0.16
CACNA1A-257ENST00000638009 IGLV2-11P01706 119 aa14.03□□□□□ -0.16
CACNA1A-257ENST00000638009 A0A087WVE0 104 aa14□□□□□ -0.17
CACNA1A-257ENST00000638009 CYP4F30PQ9H0H9 118 aa14□□□□□ -0.17
CACNA1A-257ENST00000638009 SMIM1B2RUZ4 78 aa14□□□□□ -0.17
CACNA1A-257ENST00000638009 LINC01556Q5JQF7 62 aa13.99□□□□□ -0.17
CACNA1A-257ENST00000638009 M0R2N4 97 aa13.97□□□□□ -0.17
CACNA1A-257ENST00000638009 LINC00242Q5T6M2 205 aa13.97□□□□□ -0.17
CACNA1A-257ENST00000638009 SSBP3-AS1Q7Z2R9 100 aa13.97□□□□□ -0.17
CACNA1A-257ENST00000638009 UNQ6190/PRO20217Q6UXQ8 127 aa13.97□□□□□ -0.17
CACNA1A-257ENST00000638009 PROK1P58294 105 aa13.96□□□□□ -0.17
CACNA1A-257ENST00000638009 C6orf223Q8N319 242 aa13.96□□□□□ -0.17
CACNA1A-257ENST00000638009 LMO4P61968 165 aa13.95□□□□□ -0.18
CACNA1A-257ENST00000638009 CEP295Q9C0D2 2601 aa13.94□□□□□ -0.18
CACNA1A-257ENST00000638009 HECTD1Q9ULT8 2610 aa13.93□□□□□ -0.18
CACNA1A-257ENST00000638009 LUZP6Q538Z0 58 aa13.91□□□□□ -0.18
CACNA1A-257ENST00000638009 LINC00846Q9NV44 126 aa13.9□□□□□ -0.18
CACNA1A-257ENST00000638009 AMELXQ99217 191 aa13.89□□□□□ -0.19
CACNA1A-257ENST00000638009 UQCR11O14957 56 aa13.89□□□□□ -0.19
CACNA1A-257ENST00000638009 OXLD1Q5BKU9 147 aa13.87□□□□□ -0.19
CACNA1A-257ENST00000638009 CRIP2P52943 208 aaPredicted RBP13.87□□□□□ -0.19
CACNA1A-257ENST00000638009 C9orf116Q5BN46 136 aaPredicted RBP13.86□□□□□ -0.19
CACNA1A-257ENST00000638009 SMIM29Q86T20 159 aa13.86□□□□□ -0.19
CACNA1A-257ENST00000638009 LINC00313P59037 77 aa13.85□□□□□ -0.19
CACNA1A-257ENST00000638009 NHLRC4P0CG21 123 aaPredicted RBP13.85□□□□□ -0.19
CACNA1A-257ENST00000638009 Q6ZSV7 163 aa13.84□□□□□ -0.19
CACNA1A-257ENST00000638009 CD164Q04900 197 aa13.84□□□□□ -0.19
CACNA1A-257ENST00000638009 C4orf26Q17RF5 130 aa13.84□□□□□ -0.19
CACNA1A-257ENST00000638009 MUC22E2RYF6 1773 aaPredicted RBP13.83□□□□□ -0.2
CACNA1A-257ENST00000638009 PRR3P79522 188 aaKnown RBP13.82□□□□□ -0.2
CACNA1A-257ENST00000638009 LOC101927531A0A1B0GV80 90 aa13.82□□□□□ -0.2
CACNA1A-257ENST00000638009 DEFB116Q30KQ4 102 aa13.81□□□□□ -0.2
CACNA1A-257ENST00000638009 INAFM1C9JVW0 142 aa13.81□□□□□ -0.2
CACNA1A-257ENST00000638009 COX6A2Q02221 97 aa13.81□□□□□ -0.2
CACNA1A-257ENST00000638009 ERC2-IT1O76042 136 aa13.8□□□□□ -0.2
CACNA1A-257ENST00000638009 MOBPQ13875 183 aa13.8□□□□□ -0.2
CACNA1A-257ENST00000638009 C11orf71Q6IPW1 123 aa13.8□□□□□ -0.2
CACNA1A-257ENST00000638009 ADAMTSL4-AS1Q5T5F5 129 aa13.79□□□□□ -0.2
CACNA1A-257ENST00000638009 C11orf72Q8NBR9 251 aa13.79□□□□□ -0.2
CACNA1A-257ENST00000638009 IGLV1-40P01703 118 aa13.79□□□□□ -0.2
CACNA1A-257ENST00000638009 LINC01600Q96MT4 127 aa13.78□□□□□ -0.2
CACNA1A-257ENST00000638009 EDN2P20800 178 aa13.77□□□□□ -0.2
CACNA1A-257ENST00000638009 C1orf134Q5TEV5 83 aa13.77□□□□□ -0.2
CACNA1A-257ENST00000638009 Q9UF83 564 aa13.77□□□□□ -0.2
CACNA1A-257ENST00000638009 LOC110117498A0A087WWA1 95 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms