RNA–Protein interactions for RNA: ENST00000637432.1

CACNA1A-240, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-240ENST00000637432 EDN2P20800 178 aa11.8□□□□□ -0.52
CACNA1A-240ENST00000637432 MRPS12O15235 138 aaKnown RBP11.8□□□□□ -0.52
CACNA1A-240ENST00000637432 MOBPQ13875 183 aa11.8□□□□□ -0.52
CACNA1A-240ENST00000637432 TRBV10-3A0A0K0K1G6 114 aa11.79□□□□□ -0.52
CACNA1A-240ENST00000637432 TP73-AS1Q9UF72 201 aa11.79□□□□□ -0.52
CACNA1A-240ENST00000637432 FHL2Q14192 279 aa11.79□□□□□ -0.52
CACNA1A-240ENST00000637432 A0A087WSZ3 146 aa11.79□□□□□ -0.52
CACNA1A-240ENST00000637432 PSMG3-AS1Q96PY0 264 aa11.79□□□□□ -0.52
CACNA1A-240ENST00000637432 A8MTW9 85 aa11.79□□□□□ -0.52
CACNA1A-240ENST00000637432 MAPKAPK5-AS1Q8N8E1 139 aa11.79□□□□□ -0.52
CACNA1A-240ENST00000637432 LINC00575Q6W349 94 aa11.78□□□□□ -0.52
CACNA1A-240ENST00000637432 MDFIQ99750 246 aa11.76□□□□□ -0.53
CACNA1A-240ENST00000637432 ANKHD1Q8IWZ3 2542 aaKnown RBP11.76□□□□□ -0.53
CACNA1A-240ENST00000637432 TYMSOSQ8TAI1 123 aa11.75□□□□□ -0.53
CACNA1A-240ENST00000637432 LINC00242Q5T6M2 205 aa11.74□□□□□ -0.53
CACNA1A-240ENST00000637432 TSHBP01222 138 aa11.74□□□□□ -0.53
CACNA1A-240ENST00000637432 FBXL19-AS1Q494R0 122 aa11.74□□□□□ -0.53
CACNA1A-240ENST00000637432 SPAG11AQ6PDA7 123 aa11.74□□□□□ -0.53
CACNA1A-240ENST00000637432 KRTAP10-9P60411 292 aa11.74□□□□□ -0.53
CACNA1A-240ENST00000637432 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.74□□□□□ -0.53
CACNA1A-240ENST00000637432 COX7CP15954 63 aa11.73□□□□□ -0.53
CACNA1A-240ENST00000637432 SMIM26A0A096LP01 95 aa11.73□□□□□ -0.53
CACNA1A-240ENST00000637432 MRPS36P82909 103 aaKnown RBP11.73□□□□□ -0.53
CACNA1A-240ENST00000637432 A0A1B0GU69 56 aa11.72□□□□□ -0.53
CACNA1A-240ENST00000637432 CRIP1P50238 77 aa11.71□□□□□ -0.53
CACNA1A-240ENST00000637432 PCSK5Q92824 1860 aa11.7□□□□□ -0.54
CACNA1A-240ENST00000637432 MBD6Q96DN6 1003 aa11.69□□□□□ -0.54
CACNA1A-240ENST00000637432 LINC00694P0DN24 101 aa11.69□□□□□ -0.54
CACNA1A-240ENST00000637432 TRBV7-7A0A0K0K1E9 115 aa11.69□□□□□ -0.54
CACNA1A-240ENST00000637432 Q8IZM0 81 aa11.68□□□□□ -0.54
CACNA1A-240ENST00000637432 Q96NJ1 140 aa11.68□□□□□ -0.54
CACNA1A-240ENST00000637432 A0A087WYN8 130 aa11.67□□□□□ -0.54
CACNA1A-240ENST00000637432 Q8N814 137 aa11.67□□□□□ -0.54
CACNA1A-240ENST00000637432 PIEZO1Q92508 2521 aa11.67□□□□□ -0.54
CACNA1A-240ENST00000637432 KRTAP27-1Q3LI81 207 aa11.67□□□□□ -0.54
CACNA1A-240ENST00000637432 IGLV4-60A0A075B6I1 120 aa11.67□□□□□ -0.54
CACNA1A-240ENST00000637432 ATP11AUNQ6ZP68 121 aa11.67□□□□□ -0.54
CACNA1A-240ENST00000637432 NTM-AS1Q6ZSK4 140 aa11.67□□□□□ -0.54
CACNA1A-240ENST00000637432 VPREB1P12018 145 aa11.66□□□□□ -0.54
CACNA1A-240ENST00000637432 CCDC179H3BU77 68 aa11.66□□□□□ -0.54
CACNA1A-240ENST00000637432 CDC42SE2Q9NRR3 84 aa11.66□□□□□ -0.54
CACNA1A-240ENST00000637432 APLNQ9ULZ1 77 aa11.66□□□□□ -0.54
CACNA1A-240ENST00000637432 FSTL3O95633 263 aa11.66□□□□□ -0.54
CACNA1A-240ENST00000637432 NHLRC4P0CG21 123 aaPredicted RBP11.66□□□□□ -0.54
CACNA1A-240ENST00000637432 PRR9Q5T870 116 aa11.65□□□□□ -0.54
CACNA1A-240ENST00000637432 GOLGB1Q14789 3259 aaKnown RBP11.65□□□□□ -0.54
CACNA1A-240ENST00000637432 CR1P17927 2039 aa11.65□□□□□ -0.54
CACNA1A-240ENST00000637432 SSBP3-AS1Q7Z2R9 100 aa11.64□□□□□ -0.55
CACNA1A-240ENST00000637432 RNF185Q96GF1 192 aa11.64□□□□□ -0.55
CACNA1A-240ENST00000637432 C1orf64Q8NEQ6 169 aa11.63□□□□□ -0.55
CACNA1A-240ENST00000637432 LINC00313P59037 77 aa11.63□□□□□ -0.55
CACNA1A-240ENST00000637432 C1orf229Q6ZS94 237 aaPredicted RBP11.63□□□□□ -0.55
CACNA1A-240ENST00000637432 SMCR5Q8TEV8 140 aa11.63□□□□□ -0.55
CACNA1A-240ENST00000637432 LTBP2Q14767 1821 aa11.63□□□□□ -0.55
CACNA1A-240ENST00000637432 C11orf71Q6IPW1 123 aa11.62□□□□□ -0.55
CACNA1A-240ENST00000637432 TRAV7A0A075B6U4 112 aa11.62□□□□□ -0.55
CACNA1A-240ENST00000637432 CDSNQ15517 529 aa11.61□□□□□ -0.55
CACNA1A-240ENST00000637432 LINC01554Q52M75 96 aa11.61□□□□□ -0.55
CACNA1A-240ENST00000637432 JMJD1CQ15652 2540 aa11.6□□□□□ -0.55
CACNA1A-240ENST00000637432 EGFEM1PQ0D2K5 195 aa11.6□□□□□ -0.55
CACNA1A-240ENST00000637432 Q6JHZ5 121 aa11.6□□□□□ -0.55
CACNA1A-240ENST00000637432 FHL3Q13643 280 aa11.6□□□□□ -0.55
CACNA1A-240ENST00000637432 A0A087WVE0 104 aa11.59□□□□□ -0.55
CACNA1A-240ENST00000637432 LYPD5Q6UWN5 251 aa11.59□□□□□ -0.55
CACNA1A-240ENST00000637432 AVPP01185 164 aa11.58□□□□□ -0.56
CACNA1A-240ENST00000637432 C22orf24Q9Y442 160 aa11.58□□□□□ -0.56
CACNA1A-240ENST00000637432 FLG2Q5D862 2391 aaPredicted RBP11.58□□□□□ -0.56
CACNA1A-240ENST00000637432 Q6ZRU5 148 aa11.58□□□□□ -0.56
CACNA1A-240ENST00000637432 NRACQ8N912 160 aa11.57□□□□□ -0.56
CACNA1A-240ENST00000637432 C9orf92A6NGG3 77 aa11.57□□□□□ -0.56
CACNA1A-240ENST00000637432 Q8N3U1 123 aa11.56□□□□□ -0.56
CACNA1A-240ENST00000637432 BPTFQ12830 3046 aa11.56□□□□□ -0.56
CACNA1A-240ENST00000637432 GAS8-AS1O95177 125 aa11.56□□□□□ -0.56
CACNA1A-240ENST00000637432 PHF5AQ7RTV0 110 aaKnown RBP11.56□□□□□ -0.56
CACNA1A-240ENST00000637432 C6orf48Q9UBA6 75 aa11.55□□□□□ -0.56
CACNA1A-240ENST00000637432 CDIP1Q9H305 208 aa11.54□□□□□ -0.56
CACNA1A-240ENST00000637432 RPL37AP61513 92 aaKnown RBP11.54□□□□□ -0.56
CACNA1A-240ENST00000637432 RTL8CO15255 209 aa11.53□□□□□ -0.56
CACNA1A-240ENST00000637432 KIAA0087Q14695 138 aa11.5□□□□□ -0.57
CACNA1A-240ENST00000637432 ODF3L2Q3SX64 289 aa11.49□□□□□ -0.57
CACNA1A-240ENST00000637432 TMEM254Q8TBM7 123 aa11.49□□□□□ -0.57
CACNA1A-240ENST00000637432 SMR3BP02814 79 aaPredicted RBP11.48□□□□□ -0.57
CACNA1A-240ENST00000637432 SMIM29Q86T20 159 aa11.48□□□□□ -0.57
CACNA1A-240ENST00000637432 ANKRD17O75179 2603 aaKnown RBP11.47□□□□□ -0.57
CACNA1A-240ENST00000637432 IGLV1-51P01701 117 aa11.47□□□□□ -0.57
CACNA1A-240ENST00000637432 CENPFP49454 3210 aa11.47□□□□□ -0.57
CACNA1A-240ENST00000637432 ABCA12Q86UK0 2595 aa11.46□□□□□ -0.57
CACNA1A-240ENST00000637432 IGLV1-40P01703 118 aa11.46□□□□□ -0.57
CACNA1A-240ENST00000637432 C11orf21Q9P2W6 132 aa11.46□□□□□ -0.57
CACNA1A-240ENST00000637432 BRWD1-AS2P59051 145 aa11.46□□□□□ -0.58
CACNA1A-240ENST00000637432 KLLNB2CW77 178 aa11.46□□□□□ -0.58
CACNA1A-240ENST00000637432 Q6ZSN1 163 aa11.44□□□□□ -0.58
CACNA1A-240ENST00000637432 IGLV6-57P01721 117 aa11.44□□□□□ -0.58
CACNA1A-240ENST00000637432 P0C879 139 aa11.44□□□□□ -0.58
CACNA1A-240ENST00000637432 M0R2T5 61 aa11.43□□□□□ -0.58
CACNA1A-240ENST00000637432 ZNF580Q9UK33 172 aa11.43□□□□□ -0.58
CACNA1A-240ENST00000637432 C2orf91Q6ZV80 131 aa11.43□□□□□ -0.58
CACNA1A-240ENST00000637432 SMIM1B2RUZ4 78 aa11.42□□□□□ -0.58
CACNA1A-240ENST00000637432 ZNF462Q96JM2 2506 aa11.42□□□□□ -0.58
CACNA1A-240ENST00000637432 USP9XQ93008 2570 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms