RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 FAM215AQ9Y5M1 114 aa4.45□□□□□ -1.7
SCN1A-212ENST00000636194 EGFEM1PQ0D2K5 195 aa4.45□□□□□ -1.7
SCN1A-212ENST00000636194 C1orf64Q8NEQ6 169 aa4.45□□□□□ -1.7
SCN1A-212ENST00000636194 CFAP46Q8IYW2 2715 aa4.45□□□□□ -1.7
SCN1A-212ENST00000636194 INAFM1C9JVW0 142 aa4.45□□□□□ -1.7
SCN1A-212ENST00000636194 PRM2P04554 102 aa4.44□□□□□ -1.7
SCN1A-212ENST00000636194 Q6YL49 198 aa4.44□□□□□ -1.7
SCN1A-212ENST00000636194 RITA1Q96K30 269 aa4.44□□□□□ -1.7
SCN1A-212ENST00000636194 IGLV3-1P01715 115 aa4.44□□□□□ -1.7
SCN1A-212ENST00000636194 SMIM11BQ8TCY0 68 aa4.44□□□□□ -1.7
SCN1A-212ENST00000636194 CLUHP3Q96NS8 147 aa4.44□□□□□ -1.7
SCN1A-212ENST00000636194 U3KQK5 164 aa4.44□□□□□ -1.7
SCN1A-212ENST00000636194 ERC2-IT1O76042 136 aa4.44□□□□□ -1.7
SCN1A-212ENST00000636194 CEMP1Q6PRD7 247 aaPredicted RBP4.43□□□□□ -1.7
SCN1A-212ENST00000636194 TRAV22A0A0B4J277 110 aa4.43□□□□□ -1.7
SCN1A-212ENST00000636194 KTN1-AS1Q86SY8 53 aa4.43□□□□□ -1.7
SCN1A-212ENST00000636194 ATRQ13535 2644 aa4.43□□□□□ -1.7
SCN1A-212ENST00000636194 C11orf71Q6IPW1 123 aa4.43□□□□□ -1.7
SCN1A-212ENST00000636194 PIP4P1Q86T03 277 aa4.43□□□□□ -1.7
SCN1A-212ENST00000636194 Q8N814 137 aa4.43□□□□□ -1.7
SCN1A-212ENST00000636194 LINC00482Q8N8I6 264 aa4.43□□□□□ -1.7
SCN1A-212ENST00000636194 SPACA4Q8TDM5 124 aa4.43□□□□□ -1.7
SCN1A-212ENST00000636194 TP73-AS1Q9UF72 201 aa4.43□□□□□ -1.7
SCN1A-212ENST00000636194 EIF4EBP1Q13541 118 aaPredicted RBP4.42□□□□□ -1.7
SCN1A-212ENST00000636194 PLA2G2CQ5R387 149 aa4.42□□□□□ -1.7
SCN1A-212ENST00000636194 M0QY20 66 aa4.42□□□□□ -1.7
SCN1A-212ENST00000636194 UNQ9165/PRO28630Q6UXU0 137 aa4.42□□□□□ -1.7
SCN1A-212ENST00000636194 Q8N6K4 173 aa4.42□□□□□ -1.7
SCN1A-212ENST00000636194 K7EQG2 157 aa4.42□□□□□ -1.7
SCN1A-212ENST00000636194 LINC00173Q6ZV60 143 aa4.42□□□□□ -1.7
SCN1A-212ENST00000636194 ZNF581Q9P0T4 197 aa4.42□□□□□ -1.7
SCN1A-212ENST00000636194 VWCEQ96DN2 955 aa4.41□□□□□ -1.7
SCN1A-212ENST00000636194 A0A1B0GW54 56 aa4.41□□□□□ -1.7
SCN1A-212ENST00000636194 CCDC179H3BU77 68 aa4.41□□□□□ -1.7
SCN1A-212ENST00000636194 FAM167A-AS1Q96KT0 104 aa4.41□□□□□ -1.7
SCN1A-212ENST00000636194 BBC3Q96PG8 261 aaPredicted RBP4.41□□□□□ -1.7
SCN1A-212ENST00000636194 C9orf129Q5T035 196 aaKnown RBP4.41□□□□□ -1.7
SCN1A-212ENST00000636194 PRO0628Q9UI54 55 aa4.41□□□□□ -1.7
SCN1A-212ENST00000636194 AKAP13Q12802 2813 aa4.41□□□□□ -1.7
SCN1A-212ENST00000636194 XGP55808 180 aa4.41□□□□□ -1.7
SCN1A-212ENST00000636194 PRAC2D3DTV9 90 aa4.41□□□□□ -1.7
SCN1A-212ENST00000636194 FBXL19-AS1Q494R0 122 aa4.41□□□□□ -1.7
SCN1A-212ENST00000636194 A0A087WVE0 104 aa4.4□□□□□ -1.7
SCN1A-212ENST00000636194 Q8N3U1 123 aa4.4□□□□□ -1.7
SCN1A-212ENST00000636194 LINC00959A0A1B0GUT2 108 aa4.4□□□□□ -1.7
SCN1A-212ENST00000636194 ZNF22P17026 224 aaPredicted RBP4.4□□□□□ -1.7
SCN1A-212ENST00000636194 EPM2AB3EWF7 344 aa4.4□□□□□ -1.7
SCN1A-212ENST00000636194 PLA2G2DQ9UNK4 145 aa4.4□□□□□ -1.7
SCN1A-212ENST00000636194 LINC00313P59037 77 aa4.4□□□□□ -1.71
SCN1A-212ENST00000636194 THSD7BQ9C0I4 1608 aa4.4□□□□□ -1.71
SCN1A-212ENST00000636194 H3BPC8 53 aa4.4□□□□□ -1.71
SCN1A-212ENST00000636194 C19orf84I3L1E1 186 aa4.4□□□□□ -1.71
SCN1A-212ENST00000636194 GRNP28799 593 aaKnown RBP4.39□□□□□ -1.71
SCN1A-212ENST00000636194 PLA2G5P39877 138 aa4.39□□□□□ -1.71
SCN1A-212ENST00000636194 ADORA2A-AS1P86434 159 aa4.39□□□□□ -1.71
SCN1A-212ENST00000636194 DEFB116Q30KQ4 102 aa4.39□□□□□ -1.71
SCN1A-212ENST00000636194 MRPS12O15235 138 aaKnown RBP4.39□□□□□ -1.71
SCN1A-212ENST00000636194 NRGNQ92686 78 aa4.39□□□□□ -1.71
SCN1A-212ENST00000636194 Q9UF83 564 aa4.39□□□□□ -1.71
SCN1A-212ENST00000636194 COL4A4P53420 1690 aaPredicted RBP4.39□□□□□ -1.71
SCN1A-212ENST00000636194 A0A087WSZ3 146 aa4.39□□□□□ -1.71
SCN1A-212ENST00000636194 PRORYQ9H606 182 aa4.39□□□□□ -1.71
SCN1A-212ENST00000636194 MGAM2Q2M2H8 2515 aa4.38□□□□□ -1.71
SCN1A-212ENST00000636194 PSORS1C2Q9UIG4 136 aa4.38□□□□□ -1.71
SCN1A-212ENST00000636194 TP53TG3Q9ULZ0 132 aa4.38□□□□□ -1.71
SCN1A-212ENST00000636194 NUPR1O60356 82 aa4.38□□□□□ -1.71
SCN1A-212ENST00000636194 LY6G6DO95868 133 aa4.38□□□□□ -1.71
SCN1A-212ENST00000636194 RSPO1Q2MKA7 263 aaPredicted RBP4.38□□□□□ -1.71
SCN1A-212ENST00000636194 LINC00526Q96FQ7 95 aa4.38□□□□□ -1.71
SCN1A-212ENST00000636194 IGLV4-60A0A075B6I1 120 aa4.38□□□□□ -1.71
SCN1A-212ENST00000636194 FSTL3O95633 263 aa4.38□□□□□ -1.71
SCN1A-212ENST00000636194 PSMG3-AS1Q96PY0 264 aa4.38□□□□□ -1.71
SCN1A-212ENST00000636194 IGFL2Q6UWQ7 119 aa4.37□□□□□ -1.71
SCN1A-212ENST00000636194 LINC01600Q96MT4 127 aa4.37□□□□□ -1.71
SCN1A-212ENST00000636194 IGLV1-47P01700 117 aa4.37□□□□□ -1.71
SCN1A-212ENST00000636194 Q8N7P7 452 aa4.37□□□□□ -1.71
SCN1A-212ENST00000636194 FAM19A4Q96LR4 140 aa4.37□□□□□ -1.71
SCN1A-212ENST00000636194 PLA2G2EQ9NZK7 142 aa4.37□□□□□ -1.71
SCN1A-212ENST00000636194 TYMSOSQ8TAI1 123 aa4.36□□□□□ -1.71
SCN1A-212ENST00000636194 TTTY13Q9BZ97 58 aa4.36□□□□□ -1.71
SCN1A-212ENST00000636194 A0A0A0MQY5 61 aa4.36□□□□□ -1.71
SCN1A-212ENST00000636194 LYPD5Q6UWN5 251 aa4.36□□□□□ -1.71
SCN1A-212ENST00000636194 C1orf147Q96MC9 270 aaPredicted RBP4.36□□□□□ -1.71
SCN1A-212ENST00000636194 UQCR11O14957 56 aa4.35□□□□□ -1.71
SCN1A-212ENST00000636194 NBEAL1Q6ZS30 2694 aa4.35□□□□□ -1.71
SCN1A-212ENST00000636194 COX6A2Q02221 97 aa4.35□□□□□ -1.71
SCN1A-212ENST00000636194 MOBPQ13875 183 aa4.35□□□□□ -1.71
SCN1A-212ENST00000636194 CEP295Q9C0D2 2601 aa4.35□□□□□ -1.71
SCN1A-212ENST00000636194 CDC42SE1Q9NRR8 79 aa4.35□□□□□ -1.71
SCN1A-212ENST00000636194 LINC01561Q8N1V8 128 aa4.35□□□□□ -1.71
SCN1A-212ENST00000636194 RBM12B-AS1Q9P1G2 102 aa4.35□□□□□ -1.71
SCN1A-212ENST00000636194 TSHBP01222 138 aa4.34□□□□□ -1.71
SCN1A-212ENST00000636194 CDC42SE2Q9NRR3 84 aa4.34□□□□□ -1.71
SCN1A-212ENST00000636194 ZNF503-AS2A6NEH8 195 aa4.34□□□□□ -1.71
SCN1A-212ENST00000636194 Q96NJ1 140 aa4.34□□□□□ -1.72
SCN1A-212ENST00000636194 A0A1B0GUV1 79 aa4.34□□□□□ -1.72
SCN1A-212ENST00000636194 Q6ZSV7 163 aa4.34□□□□□ -1.72
SCN1A-212ENST00000636194 PROK2Q9HC23 129 aa4.33□□□□□ -1.72
SCN1A-212ENST00000636194 Q6ZRP5 223 aa4.33□□□□□ -1.72
SCN1A-212ENST00000636194 CAMK2N1Q7Z7J9 78 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms