RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 CPAMD8Q8IZJ3 1885 aa8.41□□□□□ -1.06
COL11A1-211ENST00000635193 IL17DQ8TAD2 202 aa8.41□□□□□ -1.06
COL11A1-211ENST00000635193 LRP4O75096 1905 aa8.41□□□□□ -1.06
COL11A1-211ENST00000635193 JMJD1CQ15652 2540 aa8.41□□□□□ -1.06
COL11A1-211ENST00000635193 CENPFP49454 3210 aa8.41□□□□□ -1.06
COL11A1-211ENST00000635193 ANKRD11Q6UB99 2663 aaPredicted RBP8.4□□□□□ -1.06
COL11A1-211ENST00000635193 TRBV10-3A0A0K0K1G6 114 aa8.4□□□□□ -1.07
COL11A1-211ENST00000635193 LINC01547P58512 204 aaPredicted RBP8.4□□□□□ -1.07
COL11A1-211ENST00000635193 ZNF462Q96JM2 2506 aa8.4□□□□□ -1.07
COL11A1-211ENST00000635193 IGHV4-30-4P0DP06 118 aa8.39□□□□□ -1.07
COL11A1-211ENST00000635193 CYSRT1A8MQ03 144 aa8.39□□□□□ -1.07
COL11A1-211ENST00000635193 C1orf137Q5JT78 98 aa8.39□□□□□ -1.07
COL11A1-211ENST00000635193 BEAN1Q3B7T3 259 aa8.38□□□□□ -1.07
COL11A1-211ENST00000635193 RPL37AP8A6NKH3 93 aa8.38□□□□□ -1.07
COL11A1-211ENST00000635193 PRR3P79522 188 aaKnown RBP8.38□□□□□ -1.07
COL11A1-211ENST00000635193 SPINK6Q6UWN8 80 aa8.38□□□□□ -1.07
COL11A1-211ENST00000635193 TLN2Q9Y4G6 2542 aa8.37□□□□□ -1.07
COL11A1-211ENST00000635193 DOPEY1Q5JWR5 2465 aa8.37□□□□□ -1.07
COL11A1-211ENST00000635193 LINC00575Q6W349 94 aa8.37□□□□□ -1.07
COL11A1-211ENST00000635193 UNQ6190/PRO20217Q6UXQ8 127 aa8.37□□□□□ -1.07
COL11A1-211ENST00000635193 LINC01546A6NGU7 62 aa8.36□□□□□ -1.07
COL11A1-211ENST00000635193 ODF3L2Q3SX64 289 aa8.36□□□□□ -1.07
COL11A1-211ENST00000635193 C9orf116Q5BN46 136 aaPredicted RBP8.36□□□□□ -1.07
COL11A1-211ENST00000635193 IGLV4-60A0A075B6I1 120 aa8.36□□□□□ -1.07
COL11A1-211ENST00000635193 KPRPQ5T749 579 aaPredicted RBP8.36□□□□□ -1.07
COL11A1-211ENST00000635193 LINC01006Q8NI28 216 aa8.36□□□□□ -1.07
COL11A1-211ENST00000635193 CXCL6P80162 114 aa8.35□□□□□ -1.07
COL11A1-211ENST00000635193 CDSNQ15517 529 aa8.35□□□□□ -1.07
COL11A1-211ENST00000635193 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.35□□□□□ -1.07
COL11A1-211ENST00000635193 AVPP01185 164 aa8.34□□□□□ -1.07
COL11A1-211ENST00000635193 COL5A1P20908 1838 aaPredicted RBP8.34□□□□□ -1.07
COL11A1-211ENST00000635193 Q6ZSN1 163 aa8.33□□□□□ -1.08
COL11A1-211ENST00000635193 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.33□□□□□ -1.08
COL11A1-211ENST00000635193 DNAH12Q6ZR08 3092 aa8.33□□□□□ -1.08
COL11A1-211ENST00000635193 LINC00337Q8N6G1 96 aa8.33□□□□□ -1.08
COL11A1-211ENST00000635193 SBSPONQ8IVN8 264 aa8.33□□□□□ -1.08
COL11A1-211ENST00000635193 LIMD2Q9BT23 127 aa8.33□□□□□ -1.08
COL11A1-211ENST00000635193 H0Y9P7 68 aa8.33□□□□□ -1.08
COL11A1-211ENST00000635193 PCOTHQ58A44 107 aa8.32□□□□□ -1.08
COL11A1-211ENST00000635193 AGRNO00468 2067 aa8.32□□□□□ -1.08
COL11A1-211ENST00000635193 BCE1O60756 84 aa8.32□□□□□ -1.08
COL11A1-211ENST00000635193 BRI3O95415 125 aa8.32□□□□□ -1.08
COL11A1-211ENST00000635193 hDV103S1A0JD37 113 aa8.31□□□□□ -1.08
COL11A1-211ENST00000635193 EGFEM1PQ0D2K5 195 aa8.31□□□□□ -1.08
COL11A1-211ENST00000635193 KIF25-AS1Q9Y6Z4 181 aa8.31□□□□□ -1.08
COL11A1-211ENST00000635193 ZNF706Q9Y5V0 76 aaPredicted RBP8.31□□□□□ -1.08
COL11A1-211ENST00000635193 TRAV10A0A0B4J240 114 aa8.3□□□□□ -1.08
COL11A1-211ENST00000635193 C10orf25Q5T742 122 aa8.3□□□□□ -1.08
COL11A1-211ENST00000635193 INAFM1C9JVW0 142 aa8.3□□□□□ -1.08
COL11A1-211ENST00000635193 IGLV9-49A0A0B4J1Y8 123 aa8.29□□□□□ -1.08
COL11A1-211ENST00000635193 FHL2Q14192 279 aa8.29□□□□□ -1.08
COL11A1-211ENST00000635193 HCG22E2RYF7 251 aa8.29□□□□□ -1.08
COL11A1-211ENST00000635193 PLAC8L1A1L4L8 177 aa8.29□□□□□ -1.08
COL11A1-211ENST00000635193 USP9XQ93008 2570 aaPredicted RBP8.29□□□□□ -1.08
COL11A1-211ENST00000635193 USP9YO00507 2555 aaPredicted RBP8.27□□□□□ -1.08
COL11A1-211ENST00000635193 LRRK2Q5S007 2527 aa8.27□□□□□ -1.09
COL11A1-211ENST00000635193 CEP350Q5VT06 3117 aa8.27□□□□□ -1.09
COL11A1-211ENST00000635193 SETD2Q9BYW2 2564 aaPredicted RBP8.27□□□□□ -1.09
COL11A1-211ENST00000635193 Q8N2B8 174 aa8.27□□□□□ -1.09
COL11A1-211ENST00000635193 SERTAD4-AS1Q5TG53 156 aa8.26□□□□□ -1.09
COL11A1-211ENST00000635193 PRRC2AP48634 2157 aaKnown RBP8.26□□□□□ -1.09
COL11A1-211ENST00000635193 A8MTW9 85 aa8.26□□□□□ -1.09
COL11A1-211ENST00000635193 ABCA12Q86UK0 2595 aa8.26□□□□□ -1.09
COL11A1-211ENST00000635193 RAI1Q7Z5J4 1906 aaPredicted RBP8.26□□□□□ -1.09
COL11A1-211ENST00000635193 SMIM29Q86T20 159 aa8.25□□□□□ -1.09
COL11A1-211ENST00000635193 IGLV5-39A0A0G2JS06 123 aa8.25□□□□□ -1.09
COL11A1-211ENST00000635193 A0A087WSZ3 146 aa8.25□□□□□ -1.09
COL11A1-211ENST00000635193 EXPH5Q8NEV8 1989 aa8.25□□□□□ -1.09
COL11A1-211ENST00000635193 TET2Q6N021 2002 aaPredicted RBP8.25□□□□□ -1.09
COL11A1-211ENST00000635193 EPG5Q9HCE0 2579 aa8.24□□□□□ -1.09
COL11A1-211ENST00000635193 C6orf223Q8N319 242 aa8.24□□□□□ -1.09
COL11A1-211ENST00000635193 PCNTO95613 3336 aa8.24□□□□□ -1.09
COL11A1-211ENST00000635193 IGLV1-51P01701 117 aa8.24□□□□□ -1.09
COL11A1-211ENST00000635193 A0A1B0GUV1 79 aa8.24□□□□□ -1.09
COL11A1-211ENST00000635193 LINC00315P59091 139 aa8.24□□□□□ -1.09
COL11A1-211ENST00000635193 Q9UF83 564 aa8.24□□□□□ -1.09
COL11A1-211ENST00000635193 IGHV6-1A0A0B4J1U7 121 aa8.23□□□□□ -1.09
COL11A1-211ENST00000635193 FAM218AQ96MZ4 157 aa8.23□□□□□ -1.09
COL11A1-211ENST00000635193 LY6G6DO95868 133 aa8.23□□□□□ -1.09
COL11A1-211ENST00000635193 DEFB116Q30KQ4 102 aa8.23□□□□□ -1.09
COL11A1-211ENST00000635193 REG3GQ6UW15 175 aa8.23□□□□□ -1.09
COL11A1-211ENST00000635193 C1orf64Q8NEQ6 169 aa8.23□□□□□ -1.09
COL11A1-211ENST00000635193 SPATA3Q8NHX4 192 aa8.23□□□□□ -1.09
COL11A1-211ENST00000635193 ADAMTS20P59510 1910 aa8.23□□□□□ -1.09
COL11A1-211ENST00000635193 A0A1W2PPR1 153 aa8.23□□□□□ -1.09
COL11A1-211ENST00000635193 LINC01561Q8N1V8 128 aa8.22□□□□□ -1.09
COL11A1-211ENST00000635193 FAM19A4Q96LR4 140 aa8.21□□□□□ -1.1
COL11A1-211ENST00000635193 Q9BRP9 147 aa8.2□□□□□ -1.1
COL11A1-211ENST00000635193 C7orf33Q8WU49 177 aa8.19□□□□□ -1.1
COL11A1-211ENST00000635193 C11orf72Q8NBR9 251 aa8.19□□□□□ -1.1
COL11A1-211ENST00000635193 LINC00474Q9P2X8 69 aa8.18□□□□□ -1.1
COL11A1-211ENST00000635193 FN1P02751 2386 aaKnown RBP8.17□□□□□ -1.1
COL11A1-211ENST00000635193 POLQO75417 2590 aa8.17□□□□□ -1.1
COL11A1-211ENST00000635193 TM2D3Q9BRN9 247 aa8.17□□□□□ -1.1
COL11A1-211ENST00000635193 SPAG11AQ6PDA7 123 aa8.16□□□□□ -1.1
COL11A1-211ENST00000635193 NHLRC4P0CG21 123 aaPredicted RBP8.16□□□□□ -1.1
COL11A1-211ENST00000635193 IGLV5-45A0A087WSX0 123 aa8.16□□□□□ -1.1
COL11A1-211ENST00000635193 IGHV3OR16-9A0A0B4J2B5 98 aa8.16□□□□□ -1.1
COL11A1-211ENST00000635193 FHL3Q13643 280 aa8.16□□□□□ -1.1
COL11A1-211ENST00000635193 SMCR5Q8TEV8 140 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms