RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 GAGE2EQ4V326 116 aa9.83□□□□□ -0.84
LINC00339-207ENST00000634712 Q8IZM0 81 aa9.83□□□□□ -0.84
LINC00339-207ENST00000634712 SLC7A5P1Q8MH63 180 aa9.83□□□□□ -0.84
LINC00339-207ENST00000634712 GAGE2DQ9UEU5 116 aa9.83□□□□□ -0.84
LINC00339-207ENST00000634712 OXTP01178 125 aa9.82□□□□□ -0.84
LINC00339-207ENST00000634712 HNRNPA3P51991 378 aaKnown RBP9.82□□□□□ -0.84
LINC00339-207ENST00000634712 Q6ZRP5 223 aa9.82□□□□□ -0.84
LINC00339-207ENST00000634712 YPEL4Q96NS1 127 aa9.82□□□□□ -0.84
LINC00339-207ENST00000634712 PMCHL1Q16048 86 aa9.81□□□□□ -0.84
LINC00339-207ENST00000634712 CBLN2Q8IUK8 224 aa9.81□□□□□ -0.84
LINC00339-207ENST00000634712 URB1-AS1Q96HZ7 61 aa9.81□□□□□ -0.84
LINC00339-207ENST00000634712 PRR3P79522 188 aaKnown RBP9.8□□□□□ -0.84
LINC00339-207ENST00000634712 NDUFC2-KCTD14E9PQ53 114 aa9.79□□□□□ -0.84
LINC00339-207ENST00000634712 H3BRM9 83 aa9.79□□□□□ -0.84
LINC00339-207ENST00000634712 ATP5LO75964 103 aa9.79□□□□□ -0.84
LINC00339-207ENST00000634712 PDZD11Q5EBL8 140 aa9.79□□□□□ -0.84
LINC00339-207ENST00000634712 A0A096LNJ9 63 aa9.78□□□□□ -0.84
LINC00339-207ENST00000634712 CXCL5P42830 114 aa9.78□□□□□ -0.84
LINC00339-207ENST00000634712 PKHD1L1Q86WI1 4243 aa9.77□□□□□ -0.84
LINC00339-207ENST00000634712 IGLV5-45A0A087WSX0 123 aa9.77□□□□□ -0.84
LINC00339-207ENST00000634712 SMIM1B2RUZ4 78 aa9.77□□□□□ -0.84
LINC00339-207ENST00000634712 F8VRH5 84 aa9.77□□□□□ -0.84
LINC00339-207ENST00000634712 COX7B2Q8TF08 81 aa9.77□□□□□ -0.84
LINC00339-207ENST00000634712 CHCHD1Q96BP2 118 aaKnown RBP9.77□□□□□ -0.84
LINC00339-207ENST00000634712 HERC1Q15751 4861 aa9.77□□□□□ -0.85
LINC00339-207ENST00000634712 SPINK8P0C7L1 97 aa9.76□□□□□ -0.85
LINC00339-207ENST00000634712 PHF5AQ7RTV0 110 aaKnown RBP9.76□□□□□ -0.85
LINC00339-207ENST00000634712 FAM19A5Q7Z5A7 132 aaPredicted RBP9.76□□□□□ -0.85
LINC00339-207ENST00000634712 FAM168BA1KXE4 195 aa9.75□□□□□ -0.85
LINC00339-207ENST00000634712 IGLC3P0DOY3 106 aa9.75□□□□□ -0.85
LINC00339-207ENST00000634712 BAGE3Q86Y29 109 aa9.75□□□□□ -0.85
LINC00339-207ENST00000634712 LRP1Q07954 4544 aaKnown RBP9.75□□□□□ -0.85
LINC00339-207ENST00000634712 TRGC2P03986 189 aa9.74□□□□□ -0.85
LINC00339-207ENST00000634712 HSBP1O75506 76 aa9.73□□□□□ -0.85
LINC00339-207ENST00000634712 FAT3Q8TDW7 4589 aa9.72□□□□□ -0.85
LINC00339-207ENST00000634712 C9orf129Q5T035 196 aaKnown RBP9.72□□□□□ -0.85
LINC00339-207ENST00000634712 SPINK6Q6UWN8 80 aa9.72□□□□□ -0.85
LINC00339-207ENST00000634712 PSORS1C2Q9UIG4 136 aa9.72□□□□□ -0.85
LINC00339-207ENST00000634712 M0QXV9 152 aa9.71□□□□□ -0.86
LINC00339-207ENST00000634712 ZNF22P17026 224 aaPredicted RBP9.71□□□□□ -0.86
LINC00339-207ENST00000634712 UBE2BP63146 152 aa9.71□□□□□ -0.86
LINC00339-207ENST00000634712 C1orf137Q5JT78 98 aa9.71□□□□□ -0.86
LINC00339-207ENST00000634712 TMEM170BQ5T4T1 132 aa9.71□□□□□ -0.86
LINC00339-207ENST00000634712 IFI27L1Q96BM0 104 aa9.71□□□□□ -0.86
LINC00339-207ENST00000634712 CHTOPQ9Y3Y2 248 aaKnown RBP9.71□□□□□ -0.86
LINC00339-207ENST00000634712 XAGE1AQ9HD64 81 aa9.7□□□□□ -0.86
LINC00339-207ENST00000634712 REG3GQ6UW15 175 aa9.69□□□□□ -0.86
LINC00339-207ENST00000634712 FAM19A2Q8N3H0 131 aa9.69□□□□□ -0.86
LINC00339-207ENST00000634712 C11orf86A6NJI1 115 aa9.68□□□□□ -0.86
LINC00339-207ENST00000634712 SRSF9Q13242 221 aaKnown RBP eCLIP9.68□□□□□ -0.86
LINC00339-207ENST00000634712 TRAV12-1A0A0B4J245 112 aa9.67□□□□□ -0.86
LINC00339-207ENST00000634712 IGLV5-39A0A0G2JS06 123 aa9.67□□□□□ -0.86
LINC00339-207ENST00000634712 COLCA2A8K830 154 aa9.67□□□□□ -0.86
LINC00339-207ENST00000634712 LBHQ53QV2 105 aaPredicted RBP9.66□□□□□ -0.86
LINC00339-207ENST00000634712 KRTAP7-1Q8IUC3 87 aa9.66□□□□□ -0.86
LINC00339-207ENST00000634712 SERTAD4-AS1Q5TG53 156 aa9.65□□□□□ -0.86
LINC00339-207ENST00000634712 C22orf24Q9Y442 160 aa9.65□□□□□ -0.86
LINC00339-207ENST00000634712 SERF1AO75920 110 aa9.64□□□□□ -0.87
LINC00339-207ENST00000634712 LEPROTL1O95214 131 aa9.64□□□□□ -0.87
LINC00339-207ENST00000634712 H0Y8G0 127 aa9.63□□□□□ -0.87
LINC00339-207ENST00000634712 IGLV7-43P04211 117 aa9.63□□□□□ -0.87
LINC00339-207ENST00000634712 PFN2P35080 140 aa9.63□□□□□ -0.87
LINC00339-207ENST00000634712 SFTA2Q6UW10 78 aa9.63□□□□□ -0.87
LINC00339-207ENST00000634712 KRTAP11-1Q8IUC1 163 aa9.63□□□□□ -0.87
LINC00339-207ENST00000634712 LINC01600Q96MT4 127 aa9.63□□□□□ -0.87
LINC00339-207ENST00000634712 ZNF625Q96I27 306 aaPredicted RBP9.62□□□□□ -0.87
LINC00339-207ENST00000634712 TP73-AS1Q9UF72 201 aa9.62□□□□□ -0.87
LINC00339-207ENST00000634712 HSPB8Q9UJY1 196 aa9.62□□□□□ -0.87
LINC00339-207ENST00000634712 ERG28Q9UKR5 140 aa9.62□□□□□ -0.87
LINC00339-207ENST00000634712 TMEM223A0PJW6 202 aa9.61□□□□□ -0.87
LINC00339-207ENST00000634712 MT1HL1P0DM35 61 aa9.61□□□□□ -0.87
LINC00339-207ENST00000634712 COX17Q14061 63 aa9.61□□□□□ -0.87
LINC00339-207ENST00000634712 MRPL55Q7Z7F7 128 aaKnown RBP9.61□□□□□ -0.87
LINC00339-207ENST00000634712 DIRC1Q969H9 104 aa9.61□□□□□ -0.87
LINC00339-207ENST00000634712 SCO1O75880 301 aa9.6□□□□□ -0.87
LINC00339-207ENST00000634712 FABP4P15090 132 aa9.6□□□□□ -0.87
LINC00339-207ENST00000634712 NKAPP1Q8N9T2 125 aa9.6□□□□□ -0.87
LINC00339-207ENST00000634712 PLA2G2DQ9UNK4 145 aa9.6□□□□□ -0.87
LINC00339-207ENST00000634712 LINC00310P59036 64 aa9.59□□□□□ -0.87
LINC00339-207ENST00000634712 ODF1Q14990 250 aa9.59□□□□□ -0.87
LINC00339-207ENST00000634712 KRTAP3-3Q9BYR6 98 aa9.59□□□□□ -0.87
LINC00339-207ENST00000634712 KRTAP3-2Q9BYR7 98 aa9.59□□□□□ -0.87
LINC00339-207ENST00000634712 NUPR1O60356 82 aa9.58□□□□□ -0.88
LINC00339-207ENST00000634712 LINC00158P58513 81 aa9.57□□□□□ -0.88
LINC00339-207ENST00000634712 GAGE10A6NGK3 116 aa9.56□□□□□ -0.88
LINC00339-207ENST00000634712 ATP6V1G1O75348 118 aa9.56□□□□□ -0.88
LINC00339-207ENST00000634712 LINC00167Q96N53 147 aa9.56□□□□□ -0.88
LINC00339-207ENST00000634712 SND1-IT1Q9HBX3 110 aa9.56□□□□□ -0.88
LINC00339-207ENST00000634712 RPL37AP8A6NKH3 93 aa9.55□□□□□ -0.88
LINC00339-207ENST00000634712 H0Y9J4 135 aa9.55□□□□□ -0.88
LINC00339-207ENST00000634712 PLNP26678 52 aa9.55□□□□□ -0.88
LINC00339-207ENST00000634712 RPL24P83731 157 aaKnown RBP9.55□□□□□ -0.88
LINC00339-207ENST00000634712 IGLV5-37A0A075B6J1 123 aa9.54□□□□□ -0.88
LINC00339-207ENST00000634712 MAP1LC3CQ9BXW4 147 aa9.54□□□□□ -0.88
LINC00339-207ENST00000634712 A0A0U1RRA0 63 aa9.53□□□□□ -0.88
LINC00339-207ENST00000634712 DPM2O94777 84 aa9.53□□□□□ -0.88
LINC00339-207ENST00000634712 MEIG1Q5JSS6 88 aa9.53□□□□□ -0.88
LINC00339-207ENST00000634712 LINC00587B1AMM8 73 aa9.52□□□□□ -0.88
LINC00339-207ENST00000634712 ZNF861PO60384 105 aa9.52□□□□□ -0.88
LINC00339-207ENST00000634712 HIST1H2BKO60814 126 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms