RNA–Protein interactions for RNA: ENST00000634435.1

SMARCA2-223, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-223	ENST00000634435	BORCS7-ASMT	A0A0B4J1R7	106 aa		3.93	□□□□□ -1.78
SMARCA2-223	ENST00000634435		A0A0U1RQV1	116 aa		3.93	□□□□□ -1.78
SMARCA2-223	ENST00000634435		M0QY20	66 aa		3.93	□□□□□ -1.78
SMARCA2-223	ENST00000634435	ESD	P10768	282 aa		3.93	□□□□□ -1.78
SMARCA2-223	ENST00000634435	CKS1B	P61024	79 aa		3.93	□□□□□ -1.78
SMARCA2-223	ENST00000634435	RPL7L1	Q6DKI1	246 aa	Known RBP	3.93	□□□□□ -1.78
SMARCA2-223	ENST00000634435	MRPL55	Q7Z7F7	128 aa	Known RBP	3.93	□□□□□ -1.78
SMARCA2-223	ENST00000634435	MARVELD1	Q9BSK0	173 aa		3.93	□□□□□ -1.78
SMARCA2-223	ENST00000634435	SS18L2	Q9UHA2	77 aa		3.93	□□□□□ -1.78
SMARCA2-223	ENST00000634435	TRAV26-2	A0A0B4J265	109 aa		3.92	□□□□□ -1.78
SMARCA2-223	ENST00000634435	CACNG7	P62955	275 aa		3.92	□□□□□ -1.78
SMARCA2-223	ENST00000634435	PMVK	Q15126	192 aa		3.92	□□□□□ -1.78
SMARCA2-223	ENST00000634435	AMMECR1L	Q6DCA0	310 aa		3.92	□□□□□ -1.78
SMARCA2-223	ENST00000634435	CARD19	Q96LW7	228 aa		3.92	□□□□□ -1.78
SMARCA2-223	ENST00000634435	CARHSP1	Q9Y2V2	147 aa	Known RBP	3.92	□□□□□ -1.78
SMARCA2-223	ENST00000634435	MT-ND6	P03923	174 aa		3.91	□□□□□ -1.78
SMARCA2-223	ENST00000634435	DEFA1	P59665	94 aa		3.91	□□□□□ -1.78
SMARCA2-223	ENST00000634435	RAB5B	P61020	215 aa		3.91	□□□□□ -1.78
SMARCA2-223	ENST00000634435	IFITM3	Q01628	133 aa		3.91	□□□□□ -1.78
SMARCA2-223	ENST00000634435	RASL11A	Q6T310	242 aa		3.91	□□□□□ -1.78
SMARCA2-223	ENST00000634435	BAGE2	Q86Y30	109 aa		3.91	□□□□□ -1.78
SMARCA2-223	ENST00000634435	ZNF664	Q8N3J9	261 aa		3.91	□□□□□ -1.78
SMARCA2-223	ENST00000634435	FER1L6-AS1	Q8NA97	138 aa		3.91	□□□□□ -1.78
SMARCA2-223	ENST00000634435	FXYD6-FXYD2	A0A087WZ82	144 aa		3.9	□□□□□ -1.79
SMARCA2-223	ENST00000634435	S100A8	P05109	93 aa		3.9	□□□□□ -1.79
SMARCA2-223	ENST00000634435	PFN2	P35080	140 aa		3.9	□□□□□ -1.79
SMARCA2-223	ENST00000634435	XCL1	P47992	114 aa		3.9	□□□□□ -1.79
SMARCA2-223	ENST00000634435	LINC00299	Q6ZSB3	139 aa		3.9	□□□□□ -1.79
SMARCA2-223	ENST00000634435	LINC00526	Q96FQ7	95 aa		3.9	□□□□□ -1.79
SMARCA2-223	ENST00000634435	MED28	Q9H204	178 aa		3.9	□□□□□ -1.79
SMARCA2-223	ENST00000634435	NIT2	Q9NQR4	276 aa		3.9	□□□□□ -1.79
SMARCA2-223	ENST00000634435	PSORS1C2	Q9UIG4	136 aa		3.9	□□□□□ -1.79
SMARCA2-223	ENST00000634435	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	3.89	□□□□□ -1.79
SMARCA2-223	ENST00000634435	IGHV1-58	A0A0C4DH39	117 aa		3.89	□□□□□ -1.79
SMARCA2-223	ENST00000634435		A0A1B0GV50	99 aa		3.89	□□□□□ -1.79
SMARCA2-223	ENST00000634435		A0A1B0GVG6	124 aa		3.89	□□□□□ -1.79
SMARCA2-223	ENST00000634435	IGKV2-29	A2NJV5	120 aa	Predicted RBP	3.89	□□□□□ -1.79
SMARCA2-223	ENST00000634435	TRGC1	P0CF51	173 aa		3.89	□□□□□ -1.79
SMARCA2-223	ENST00000634435	NMU	P48645	174 aa		3.89	□□□□□ -1.79
SMARCA2-223	ENST00000634435	SYCN	Q0VAF6	134 aa		3.89	□□□□□ -1.79
SMARCA2-223	ENST00000634435	BORCS7	Q96B45	105 aa		3.89	□□□□□ -1.79
SMARCA2-223	ENST00000634435	CCL25	O15444	150 aa		3.88	□□□□□ -1.79
SMARCA2-223	ENST00000634435	APCS	P02743	223 aa		3.88	□□□□□ -1.79
SMARCA2-223	ENST00000634435	IGLC6	P0CF74	106 aa		3.88	□□□□□ -1.79
SMARCA2-223	ENST00000634435	FGF6	P10767	208 aa		3.88	□□□□□ -1.79
SMARCA2-223	ENST00000634435	ZNF25	P17030	456 aa	Predicted RBP	3.88	□□□□□ -1.79
SMARCA2-223	ENST00000634435	RPS20	P60866	119 aa	Known RBP	3.88	□□□□□ -1.79
SMARCA2-223	ENST00000634435	HERVK_113	P61574	105 aa		3.88	□□□□□ -1.79
SMARCA2-223	ENST00000634435		Q5BKY6	102 aa		3.88	□□□□□ -1.79
SMARCA2-223	ENST00000634435	C1orf137	Q5JT78	98 aa		3.88	□□□□□ -1.79
SMARCA2-223	ENST00000634435	KRTAP5-1	Q6L8H4	278 aa		3.88	□□□□□ -1.79
SMARCA2-223	ENST00000634435	SFT2D1	Q8WV19	159 aa		3.88	□□□□□ -1.79
SMARCA2-223	ENST00000634435	LPA	P08519	4548 aa		3.88	□□□□□ -1.79
SMARCA2-223	ENST00000634435	MUC2	Q02817	5179 aa		3.88	□□□□□ -1.79
SMARCA2-223	ENST00000634435	LOC107984640	A0A0U1RRK4	108 aa		3.87	□□□□□ -1.79
SMARCA2-223	ENST00000634435	NCR2	O95944	276 aa		3.87	□□□□□ -1.79
SMARCA2-223	ENST00000634435	BCL2	P10415	239 aa		3.87	□□□□□ -1.79
SMARCA2-223	ENST00000634435	NTF3	P20783	257 aa		3.87	□□□□□ -1.79
SMARCA2-223	ENST00000634435	RPL35	P42766	123 aa	Known RBP	3.87	□□□□□ -1.79
SMARCA2-223	ENST00000634435	CXCL5	P42830	114 aa		3.87	□□□□□ -1.79
SMARCA2-223	ENST00000634435	FAM213B	Q8TBF2	198 aa		3.87	□□□□□ -1.79
SMARCA2-223	ENST00000634435	DIRC1	Q969H9	104 aa		3.87	□□□□□ -1.79
SMARCA2-223	ENST00000634435	SPANXC	Q9NY87	97 aa		3.87	□□□□□ -1.79
SMARCA2-223	ENST00000634435		A0A1W2PNN7	141 aa		3.86	□□□□□ -1.79
SMARCA2-223	ENST00000634435		F2Z2F3	143 aa		3.86	□□□□□ -1.79
SMARCA2-223	ENST00000634435	ZNF861P	O60384	105 aa		3.86	□□□□□ -1.79
SMARCA2-223	ENST00000634435	APOM	O95445	188 aa		3.86	□□□□□ -1.79
SMARCA2-223	ENST00000634435	EIF5A	P63241	154 aa	Known RBP	3.86	□□□□□ -1.79
SMARCA2-223	ENST00000634435	C9orf116	Q5BN46	136 aa	Predicted RBP	3.86	□□□□□ -1.79
SMARCA2-223	ENST00000634435	CENPW	Q5EE01	88 aa		3.86	□□□□□ -1.79
SMARCA2-223	ENST00000634435	LYZL1	Q6UWQ5	148 aa		3.86	□□□□□ -1.79
SMARCA2-223	ENST00000634435	FA2H	Q7L5A8	372 aa		3.86	□□□□□ -1.79
SMARCA2-223	ENST00000634435	KCNRG	Q8N5I3	272 aa		3.86	□□□□□ -1.79
SMARCA2-223	ENST00000634435	OR5A1	Q8NGJ0	315 aa		3.86	□□□□□ -1.79
SMARCA2-223	ENST00000634435	C14orf144	Q96I85	54 aa		3.86	□□□□□ -1.79
SMARCA2-223	ENST00000634435	CAMK2N2	Q96S95	79 aa		3.86	□□□□□ -1.79
SMARCA2-223	ENST00000634435	IGLV4-69	A0A075B6H9	119 aa		3.85	□□□□□ -1.79
SMARCA2-223	ENST00000634435	IGLV1-50	A0A075B6I6	118 aa		3.85	□□□□□ -1.79
SMARCA2-223	ENST00000634435	LINC00959	A0A1B0GUT2	108 aa		3.85	□□□□□ -1.79
SMARCA2-223	ENST00000634435	SDHAF1	A6NFY7	115 aa		3.85	□□□□□ -1.79
SMARCA2-223	ENST00000634435	IGLV7-43	P04211	117 aa		3.85	□□□□□ -1.79
SMARCA2-223	ENST00000634435	KRTAP1-4	P0C5Y4	121 aa		3.85	□□□□□ -1.79
SMARCA2-223	ENST00000634435	UBE2D1	P51668	147 aa		3.85	□□□□□ -1.79
SMARCA2-223	ENST00000634435	AKR1D1	P51857	326 aa		3.85	□□□□□ -1.79
SMARCA2-223	ENST00000634435	SS18	Q15532	418 aa		3.85	□□□□□ -1.79
SMARCA2-223	ENST00000634435	EIF5AL1	Q6IS14	154 aa	Known RBP	3.85	□□□□□ -1.79
SMARCA2-223	ENST00000634435	PHF5A	Q7RTV0	110 aa	Known RBP	3.85	□□□□□ -1.79
SMARCA2-223	ENST00000634435	RPL39L	Q96EH5	51 aa	Known RBP	3.85	□□□□□ -1.79
SMARCA2-223	ENST00000634435	TRAV1-1	A0A0B4J248	108 aa		3.84	□□□□□ -1.79
SMARCA2-223	ENST00000634435	C19orf71	A6NCJ1	209 aa		3.84	□□□□□ -1.79
SMARCA2-223	ENST00000634435		H0Y9J4	135 aa		3.84	□□□□□ -1.79
SMARCA2-223	ENST00000634435	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	3.84	□□□□□ -1.79
SMARCA2-223	ENST00000634435		K7ERU9	68 aa		3.84	□□□□□ -1.79
SMARCA2-223	ENST00000634435	COX7A2L	O14548	114 aa		3.84	□□□□□ -1.79
SMARCA2-223	ENST00000634435	MEF2B	Q02080	365 aa	Predicted RBP	3.84	□□□□□ -1.79
SMARCA2-223	ENST00000634435	PMAIP1	Q13794	54 aa		3.84	□□□□□ -1.79
SMARCA2-223	ENST00000634435	BATF	Q16520	125 aa		3.84	□□□□□ -1.79
SMARCA2-223	ENST00000634435	NUP35	Q8NFH5	326 aa		3.84	□□□□□ -1.79
SMARCA2-223	ENST00000634435	TMEM126A	Q9H061	195 aa		3.84	□□□□□ -1.79
SMARCA2-223	ENST00000634435	CYTL1	Q9NRR1	136 aa		3.84	□□□□□ -1.79

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