RNA–Protein interactions for RNA: ENST00000629219.1

PKP4-218, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-218ENST00000629219 PDZD11Q5EBL8 140 aa5.59□□□□□ -1.51
PKP4-218ENST00000629219 SVBPQ8N300 66 aa5.59□□□□□ -1.51
PKP4-218ENST00000629219 RPS10P5Q9NQ39 176 aa5.59□□□□□ -1.51
PKP4-218ENST00000629219 PSORS1C2Q9UIG4 136 aa5.59□□□□□ -1.51
PKP4-218ENST00000629219 F8VRH5 84 aa5.58□□□□□ -1.52
PKP4-218ENST00000629219 SNAPINO95295 136 aa5.58□□□□□ -1.52
PKP4-218ENST00000629219 CKS1BP61024 79 aa5.58□□□□□ -1.52
PKP4-218ENST00000629219 FABP9Q0Z7S8 132 aa5.58□□□□□ -1.52
PKP4-218ENST00000629219 PMVKQ15126 192 aa5.58□□□□□ -1.52
PKP4-218ENST00000629219 NDUFA5Q16718 116 aa5.58□□□□□ -1.52
PKP4-218ENST00000629219 C6orf226Q5I0X4 101 aa5.58□□□□□ -1.52
PKP4-218ENST00000629219 ZC2HC1BQ5TFG8 222 aa5.58□□□□□ -1.52
PKP4-218ENST00000629219 FA2HQ7L5A8 372 aa5.58□□□□□ -1.52
PKP4-218ENST00000629219 SMCO4Q9NRQ5 59 aa5.58□□□□□ -1.52
PKP4-218ENST00000629219 CDKN2A-AS1Q9UH64 79 aa5.58□□□□□ -1.52
PKP4-218ENST00000629219 SMIM1B2RUZ4 78 aa5.57□□□□□ -1.52
PKP4-218ENST00000629219 C2orf82Q6UX34 121 aa5.57□□□□□ -1.52
PKP4-218ENST00000629219 PHF5AQ7RTV0 110 aaKnown RBP5.57□□□□□ -1.52
PKP4-218ENST00000629219 CST9LQ9H4G1 147 aa5.57□□□□□ -1.52
PKP4-218ENST00000629219 LINC00614P0C842 121 aa5.56□□□□□ -1.52
PKP4-218ENST00000629219 KRTAP10-8P60410 259 aa5.56□□□□□ -1.52
PKP4-218ENST00000629219 RAB5BP61020 215 aa5.56□□□□□ -1.52
PKP4-218ENST00000629219 GAGE2EQ4V326 116 aa5.56□□□□□ -1.52
PKP4-218ENST00000629219 C9orf129Q5T035 196 aaKnown RBP5.56□□□□□ -1.52
PKP4-218ENST00000629219 KRTAP7-1Q8IUC3 87 aa5.56□□□□□ -1.52
PKP4-218ENST00000629219 LINC00469Q8N7U9 141 aa5.56□□□□□ -1.52
PKP4-218ENST00000629219 C18orf32Q8TCD1 76 aa5.56□□□□□ -1.52
PKP4-218ENST00000629219 TOMM7Q9P0U1 55 aa5.56□□□□□ -1.52
PKP4-218ENST00000629219 GAGE2DQ9UEU5 116 aa5.56□□□□□ -1.52
PKP4-218ENST00000629219 TP73-AS1Q9UF72 201 aa5.56□□□□□ -1.52
PKP4-218ENST00000629219 FAM168BA1KXE4 195 aa5.55□□□□□ -1.52
PKP4-218ENST00000629219 H3BRM9 83 aa5.55□□□□□ -1.52
PKP4-218ENST00000629219 M0QXV9 152 aa5.55□□□□□ -1.52
PKP4-218ENST00000629219 HBDP02042 147 aa5.55□□□□□ -1.52
PKP4-218ENST00000629219 APOC3P02656 99 aa5.55□□□□□ -1.52
PKP4-218ENST00000629219 IGLV7-43P04211 117 aa5.55□□□□□ -1.52
PKP4-218ENST00000629219 IGLC3P0DOY3 106 aa5.55□□□□□ -1.52
PKP4-218ENST00000629219 C1orf137Q5JT78 98 aa5.55□□□□□ -1.52
PKP4-218ENST00000629219 DIRC1Q969H9 104 aa5.55□□□□□ -1.52
PKP4-218ENST00000629219 TRAPPC1Q9Y5R8 145 aa5.55□□□□□ -1.52
PKP4-218ENST00000629219 A0A096LNJ9 63 aa5.54□□□□□ -1.52
PKP4-218ENST00000629219 NUPR1O60356 82 aa5.54□□□□□ -1.52
PKP4-218ENST00000629219 ATP5LO75964 103 aa5.54□□□□□ -1.52
PKP4-218ENST00000629219 LBHQ53QV2 105 aaPredicted RBP5.54□□□□□ -1.52
PKP4-218ENST00000629219 SFTA2Q6UW10 78 aa5.54□□□□□ -1.52
PKP4-218ENST00000629219 FAM19A5Q7Z5A7 132 aaPredicted RBP5.54□□□□□ -1.52
PKP4-218ENST00000629219 COX7B2Q8TF08 81 aa5.54□□□□□ -1.52
PKP4-218ENST00000629219 YPEL4Q96NS1 127 aa5.54□□□□□ -1.52
PKP4-218ENST00000629219 IGLV5-39A0A0G2JS06 123 aa5.53□□□□□ -1.52
PKP4-218ENST00000629219 H0Y9J4 135 aa5.53□□□□□ -1.52
PKP4-218ENST00000629219 URB1-AS1Q96HZ7 61 aa5.53□□□□□ -1.52
PKP4-218ENST00000629219 IGLV5-37A0A075B6J1 123 aa5.52□□□□□ -1.53
PKP4-218ENST00000629219 UBE2BP63146 152 aa5.52□□□□□ -1.53
PKP4-218ENST00000629219 CHCHD1Q96BP2 118 aaKnown RBP5.52□□□□□ -1.53
PKP4-218ENST00000629219 COX17Q14061 63 aa5.51□□□□□ -1.53
PKP4-218ENST00000629219 KRTAP11-1Q8IUC1 163 aa5.51□□□□□ -1.53
PKP4-218ENST00000629219 C22orf24Q9Y442 160 aa5.51□□□□□ -1.53
PKP4-218ENST00000629219 IGLV1-50A0A075B6I6 118 aa5.5□□□□□ -1.53
PKP4-218ENST00000629219 TRAV12-1A0A0B4J245 112 aa5.5□□□□□ -1.53
PKP4-218ENST00000629219 SPINK8P0C7L1 97 aa5.5□□□□□ -1.53
PKP4-218ENST00000629219 ZNF22P17026 224 aaPredicted RBP5.5□□□□□ -1.53
PKP4-218ENST00000629219 MRPL55Q7Z7F7 128 aaKnown RBP5.5□□□□□ -1.53
PKP4-218ENST00000629219 ZNF861PO60384 105 aa5.49□□□□□ -1.53
PKP4-218ENST00000629219 XAGE1AQ9HD64 81 aa5.49□□□□□ -1.53
PKP4-218ENST00000629219 KRTAP1-4P0C5Y4 121 aa5.48□□□□□ -1.53
PKP4-218ENST00000629219 RPL13AP40429 203 aaKnown RBP5.48□□□□□ -1.53
PKP4-218ENST00000629219 C11orf86A6NJI1 115 aa5.47□□□□□ -1.53
PKP4-218ENST00000629219 BAGE3Q86Y29 109 aa5.47□□□□□ -1.53
PKP4-218ENST00000629219 BCE1O60756 84 aa5.46□□□□□ -1.54
PKP4-218ENST00000629219 RPL28P46779 137 aaKnown RBP5.46□□□□□ -1.54
PKP4-218ENST00000629219 NDUFA6P56556 154 aa5.46□□□□□ -1.54
PKP4-218ENST00000629219 PMCHL1Q16048 86 aa5.46□□□□□ -1.54
PKP4-218ENST00000629219 IFI27L1Q96BM0 104 aa5.46□□□□□ -1.54
PKP4-218ENST00000629219 ZNF625Q96I27 306 aaPredicted RBP5.46□□□□□ -1.54
PKP4-218ENST00000629219 ERG28Q9UKR5 140 aa5.46□□□□□ -1.54
PKP4-218ENST00000629219 CHTOPQ9Y3Y2 248 aaKnown RBP5.46□□□□□ -1.54
PKP4-218ENST00000629219 TMEM170BQ5T4T1 132 aa5.45□□□□□ -1.54
PKP4-218ENST00000629219 NKAPP1Q8N9T2 125 aa5.45□□□□□ -1.54
PKP4-218ENST00000629219 LINC00167Q96N53 147 aa5.45□□□□□ -1.54
PKP4-218ENST00000629219 TMEM223A0PJW6 202 aa5.44□□□□□ -1.54
PKP4-218ENST00000629219 HSBP1O75506 76 aa5.44□□□□□ -1.54
PKP4-218ENST00000629219 VPREB1P12018 145 aa5.44□□□□□ -1.54
PKP4-218ENST00000629219 RPL24P83731 157 aaKnown RBP5.44□□□□□ -1.54
PKP4-218ENST00000629219 KRTAP13-1Q8IUC0 172 aa5.44□□□□□ -1.54
PKP4-218ENST00000629219 CBLN2Q8IUK8 224 aa5.44□□□□□ -1.54
PKP4-218ENST00000629219 LINC00587B1AMM8 73 aa5.43□□□□□ -1.54
PKP4-218ENST00000629219 PRR26Q8N8Z3 221 aa5.43□□□□□ -1.54
PKP4-218ENST00000629219 SND1-IT1Q9HBX3 110 aa5.43□□□□□ -1.54
PKP4-218ENST00000629219 HERV-K104P63124 156 aa5.42□□□□□ -1.54
PKP4-218ENST00000629219 TRGC2P03986 189 aa5.41□□□□□ -1.54
PKP4-218ENST00000629219 PFN2P35080 140 aa5.41□□□□□ -1.54
PKP4-218ENST00000629219 CTAG1AP78358 180 aa5.41□□□□□ -1.54
PKP4-218ENST00000629219 RPL37AP8A6NKH3 93 aa5.4□□□□□ -1.54
PKP4-218ENST00000629219 LEPROTL1O95214 131 aa5.4□□□□□ -1.54
PKP4-218ENST00000629219 PLNP26678 52 aa5.4□□□□□ -1.54
PKP4-218ENST00000629219 LINC00310P59036 64 aa5.4□□□□□ -1.54
PKP4-218ENST00000629219 FAM229BQ4G0N7 80 aa5.4□□□□□ -1.54
PKP4-218ENST00000629219 HSPB8Q9UJY1 196 aa5.4□□□□□ -1.54
PKP4-218ENST00000629219 IGKV2D-26A0A0A0MRZ7 120 aa5.39□□□□□ -1.55
PKP4-218ENST00000629219 COLCA2A8K830 154 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms