RNA–Protein interactions for RNA: ENST00000629088.1

PNKP-222, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-222ENST00000629088 IGLV1-50A0A075B6I6 118 aa9.58□□□□□ -0.88
PNKP-222ENST00000629088 M0QXV9 152 aa9.58□□□□□ -0.88
PNKP-222ENST00000629088 ORMDL2Q53FV1 153 aa9.58□□□□□ -0.88
PNKP-222ENST00000629088 C2orf66Q6UXQ4 117 aa9.58□□□□□ -0.88
PNKP-222ENST00000629088 FAM19A3Q7Z5A8 133 aa9.58□□□□□ -0.88
PNKP-222ENST00000629088 KRTAP7-1Q8IUC3 87 aa9.58□□□□□ -0.88
PNKP-222ENST00000629088 Q8N8P6 123 aa9.58□□□□□ -0.88
PNKP-222ENST00000629088 AMELXQ99217 191 aa9.58□□□□□ -0.88
PNKP-222ENST00000629088 C2orf82Q6UX34 121 aa9.57□□□□□ -0.88
PNKP-222ENST00000629088 LINC00173Q6ZV60 143 aa9.57□□□□□ -0.88
PNKP-222ENST00000629088 PRR26Q8N8Z3 221 aa9.57□□□□□ -0.88
PNKP-222ENST00000629088 LOC389332A0A1B0GUA5 103 aa9.56□□□□□ -0.88
PNKP-222ENST00000629088 AKR1D1P51857 326 aa9.56□□□□□ -0.88
PNKP-222ENST00000629088 UBE2BP63146 152 aa9.56□□□□□ -0.88
PNKP-222ENST00000629088 VCX2Q9H322 139 aa9.56□□□□□ -0.88
PNKP-222ENST00000629088 PRSS2P07478 247 aa9.55□□□□□ -0.88
PNKP-222ENST00000629088 G0S2P27469 103 aa9.55□□□□□ -0.88
PNKP-222ENST00000629088 PAPPA-AS1Q5QFB9 102 aa9.55□□□□□ -0.88
PNKP-222ENST00000629088 C9orf129Q5T035 196 aaKnown RBP9.55□□□□□ -0.88
PNKP-222ENST00000629088 Q8IZM0 81 aa9.55□□□□□ -0.88
PNKP-222ENST00000629088 MUC2Q02817 5179 aa9.55□□□□□ -0.88
PNKP-222ENST00000629088 IGIPA6NJ69 53 aa9.54□□□□□ -0.88
PNKP-222ENST00000629088 KRTAP1-4P0C5Y4 121 aa9.54□□□□□ -0.88
PNKP-222ENST00000629088 SEC11AP67812 179 aa9.54□□□□□ -0.88
PNKP-222ENST00000629088 COX19Q49B96 90 aa9.54□□□□□ -0.88
PNKP-222ENST00000629088 NXT2Q9NPJ8 142 aaKnown RBP9.54□□□□□ -0.88
PNKP-222ENST00000629088 C5orf52A6NGY3 159 aa9.53□□□□□ -0.88
PNKP-222ENST00000629088 RPL13AP40429 203 aaKnown RBP9.53□□□□□ -0.88
PNKP-222ENST00000629088 CKS1BP61024 79 aa9.53□□□□□ -0.88
PNKP-222ENST00000629088 HERVK_113P63121 156 aa9.53□□□□□ -0.88
PNKP-222ENST00000629088 C12orf57Q99622 126 aa9.53□□□□□ -0.88
PNKP-222ENST00000629088 TRGC2P03986 189 aa9.52□□□□□ -0.89
PNKP-222ENST00000629088 S100A6P06703 90 aa9.52□□□□□ -0.89
PNKP-222ENST00000629088 SNRPEP62304 92 aaKnown RBP9.52□□□□□ -0.89
PNKP-222ENST00000629088 C6orf226Q5I0X4 101 aa9.52□□□□□ -0.89
PNKP-222ENST00000629088 TIMM17AQ99595 171 aa9.51□□□□□ -0.89
PNKP-222ENST00000629088 GNB1LQ9BYB4 327 aa9.51□□□□□ -0.89
PNKP-222ENST00000629088 TOMM7Q9P0U1 55 aa9.51□□□□□ -0.89
PNKP-222ENST00000629088 PCP4L1A6NKN8 68 aa9.5□□□□□ -0.89
PNKP-222ENST00000629088 NUPR1O60356 82 aa9.5□□□□□ -0.89
PNKP-222ENST00000629088 CTAG1AP78358 180 aa9.5□□□□□ -0.89
PNKP-222ENST00000629088 S100A12P80511 92 aa9.5□□□□□ -0.89
PNKP-222ENST00000629088 ZC2HC1BQ5TFG8 222 aa9.5□□□□□ -0.89
PNKP-222ENST00000629088 ALKBH7Q9BT30 221 aaPredicted RBP9.5□□□□□ -0.89
PNKP-222ENST00000629088 F8VRH5 84 aa9.49□□□□□ -0.89
PNKP-222ENST00000629088 ZNF861PO60384 105 aa9.49□□□□□ -0.89
PNKP-222ENST00000629088 SMIM6P0DI80 62 aa9.49□□□□□ -0.89
PNKP-222ENST00000629088 CXCL5P42830 114 aa9.49□□□□□ -0.89
PNKP-222ENST00000629088 LBHQ53QV2 105 aaPredicted RBP9.49□□□□□ -0.89
PNKP-222ENST00000629088 TRAPPC1Q9Y5R8 145 aa9.49□□□□□ -0.89
PNKP-222ENST00000629088 TOMM6Q96B49 74 aa9.48□□□□□ -0.89
PNKP-222ENST00000629088 GEMIN7Q9H840 131 aaKnown RBP9.48□□□□□ -0.89
PNKP-222ENST00000629088 TP73-AS1Q9UF72 201 aa9.48□□□□□ -0.89
PNKP-222ENST00000629088 CDKN2A-AS1Q9UH64 79 aa9.48□□□□□ -0.89
PNKP-222ENST00000629088 C22orf24Q9Y442 160 aa9.48□□□□□ -0.89
PNKP-222ENST00000629088 LINC01549A6NIU2 74 aa9.47□□□□□ -0.89
PNKP-222ENST00000629088 HIST1H2BKO60814 126 aa9.47□□□□□ -0.89
PNKP-222ENST00000629088 HIST1H2BJP06899 126 aa9.47□□□□□ -0.89
PNKP-222ENST00000629088 HIST1H2BOP23527 126 aa9.47□□□□□ -0.89
PNKP-222ENST00000629088 HIST1H2BBP33778 126 aa9.47□□□□□ -0.89
PNKP-222ENST00000629088 HIST1H2BDP58876 126 aa9.47□□□□□ -0.89
PNKP-222ENST00000629088 HIST1H2BCP62807 126 aa9.47□□□□□ -0.89
PNKP-222ENST00000629088 FABP9Q0Z7S8 132 aa9.47□□□□□ -0.89
PNKP-222ENST00000629088 HIST2H2BEQ16778 126 aa9.47□□□□□ -0.89
PNKP-222ENST00000629088 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.47□□□□□ -0.89
PNKP-222ENST00000629088 HIST1H2BHQ93079 126 aa9.47□□□□□ -0.89
PNKP-222ENST00000629088 HIST1H2BNQ99877 126 aa9.47□□□□□ -0.89
PNKP-222ENST00000629088 HIST1H2BMQ99879 126 aa9.47□□□□□ -0.89
PNKP-222ENST00000629088 MRPL18Q9H0U6 180 aaKnown RBP9.47□□□□□ -0.89
PNKP-222ENST00000629088 ERASQ7Z444 233 aa9.46□□□□□ -0.9
PNKP-222ENST00000629088 NDUFA6P56556 154 aa9.45□□□□□ -0.9
PNKP-222ENST00000629088 LINC00469Q8N7U9 141 aa9.45□□□□□ -0.9
PNKP-222ENST00000629088 XAGE1AQ9HD64 81 aa9.45□□□□□ -0.9
PNKP-222ENST00000629088 MRPL55Q7Z7F7 128 aaKnown RBP9.44□□□□□ -0.9
PNKP-222ENST00000629088 IGLV5-45A0A087WSX0 123 aa9.43□□□□□ -0.9
PNKP-222ENST00000629088 TINCRA0A1B0GVN0 87 aa9.43□□□□□ -0.9
PNKP-222ENST00000629088 SMIM1B2RUZ4 78 aa9.43□□□□□ -0.9
PNKP-222ENST00000629088 KIAA1644Q3SXP7 199 aa9.43□□□□□ -0.9
PNKP-222ENST00000629088 PDZD11Q5EBL8 140 aa9.43□□□□□ -0.9
PNKP-222ENST00000629088 LINC01546A6NGU7 62 aa9.42□□□□□ -0.9
PNKP-222ENST00000629088 RPL28P46779 137 aaKnown RBP9.42□□□□□ -0.9
PNKP-222ENST00000629088 COA6Q5JTJ3 125 aaKnown RBP9.42□□□□□ -0.9
PNKP-222ENST00000629088 SCGB3A1Q96QR1 104 aa9.42□□□□□ -0.9
PNKP-222ENST00000629088 BCE1O60756 84 aa9.41□□□□□ -0.9
PNKP-222ENST00000629088 PRR4Q16378 134 aa9.4□□□□□ -0.9
PNKP-222ENST00000629088 COX7B2Q8TF08 81 aa9.4□□□□□ -0.9
PNKP-222ENST00000629088 IGLV5-37A0A075B6J1 123 aa9.38□□□□□ -0.91
PNKP-222ENST00000629088 CST9LQ9H4G1 147 aa9.38□□□□□ -0.91
PNKP-222ENST00000629088 LINC00587B1AMM8 73 aa9.37□□□□□ -0.91
PNKP-222ENST00000629088 HIST3H2BBQ8N257 126 aa9.37□□□□□ -0.91
PNKP-222ENST00000629088 FAT4Q6V0I7 4981 aa9.37□□□□□ -0.91
PNKP-222ENST00000629088 S100A2P29034 98 aa9.36□□□□□ -0.91
PNKP-222ENST00000629088 PMVKQ15126 192 aa9.36□□□□□ -0.91
PNKP-222ENST00000629088 LINC00167Q96N53 147 aa9.36□□□□□ -0.91
PNKP-222ENST00000629088 KRTAP9-2Q9BYQ4 174 aa9.36□□□□□ -0.91
PNKP-222ENST00000629088 CRYGAP11844 174 aa9.35□□□□□ -0.91
PNKP-222ENST00000629088 C18orf32Q8TCD1 76 aa9.35□□□□□ -0.91
PNKP-222ENST00000629088 A0A087X002 238 aa9.34□□□□□ -0.91
PNKP-222ENST00000629088 H3BRM9 83 aa9.34□□□□□ -0.91
PNKP-222ENST00000629088 RPL37AP8A6NKH3 93 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms