RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 KRTAP7-1Q8IUC3 87 aa6.94□□□□□ -1.3
DDX41-219ENST00000629036 STPG4Q8N801 248 aa6.94□□□□□ -1.3
DDX41-219ENST00000629036 TNXBP22105 4242 aa6.93□□□□□ -1.3
DDX41-219ENST00000629036 TRGC2P03986 189 aa6.93□□□□□ -1.3
DDX41-219ENST00000629036 IGLC3P0DOY3 106 aa6.93□□□□□ -1.3
DDX41-219ENST00000629036 Q6ZRP5 223 aa6.93□□□□□ -1.3
DDX41-219ENST00000629036 Q8IZM0 81 aa6.93□□□□□ -1.3
DDX41-219ENST00000629036 LINC00474Q9P2X8 69 aa6.93□□□□□ -1.3
DDX41-219ENST00000629036 SEC11AP67812 179 aa6.92□□□□□ -1.3
DDX41-219ENST00000629036 PKIGQ9Y2B9 76 aa6.92□□□□□ -1.3
DDX41-219ENST00000629036 IGLV5-39A0A0G2JS06 123 aa6.91□□□□□ -1.3
DDX41-219ENST00000629036 TRBV30A0A0K0K1B3 111 aa6.91□□□□□ -1.3
DDX41-219ENST00000629036 SCO1O75880 301 aa6.91□□□□□ -1.3
DDX41-219ENST00000629036 GAGE2BQ13066 116 aa6.91□□□□□ -1.3
DDX41-219ENST00000629036 C9orf116Q5BN46 136 aaPredicted RBP6.91□□□□□ -1.3
DDX41-219ENST00000629036 CHCHD1Q96BP2 118 aaKnown RBP6.91□□□□□ -1.3
DDX41-219ENST00000629036 ZNF22P17026 224 aaPredicted RBP6.9□□□□□ -1.3
DDX41-219ENST00000629036 RAB5BP61020 215 aa6.9□□□□□ -1.3
DDX41-219ENST00000629036 PRR3P79522 188 aaKnown RBP6.9□□□□□ -1.3
DDX41-219ENST00000629036 RPL18AQ02543 176 aaKnown RBP6.9□□□□□ -1.3
DDX41-219ENST00000629036 LINC00469Q8N7U9 141 aa6.9□□□□□ -1.3
DDX41-219ENST00000629036 GEMIN7Q9H840 131 aaKnown RBP6.9□□□□□ -1.3
DDX41-219ENST00000629036 FAM168BA1KXE4 195 aa6.89□□□□□ -1.31
DDX41-219ENST00000629036 C11orf86A6NJI1 115 aa6.89□□□□□ -1.31
DDX41-219ENST00000629036 C9orf129Q5T035 196 aaKnown RBP6.89□□□□□ -1.31
DDX41-219ENST00000629036 KRTAP11-1Q8IUC1 163 aa6.89□□□□□ -1.31
DDX41-219ENST00000629036 NDUFC2-KCTD14E9PQ53 114 aa6.88□□□□□ -1.31
DDX41-219ENST00000629036 NUPR1O60356 82 aa6.88□□□□□ -1.31
DDX41-219ENST00000629036 ATP5LO75964 103 aa6.88□□□□□ -1.31
DDX41-219ENST00000629036 SPINK8P0C7L1 97 aa6.88□□□□□ -1.31
DDX41-219ENST00000629036 TOMM7Q9P0U1 55 aa6.88□□□□□ -1.31
DDX41-219ENST00000629036 F8VRH5 84 aa6.87□□□□□ -1.31
DDX41-219ENST00000629036 SERF1AO75920 110 aa6.87□□□□□ -1.31
DDX41-219ENST00000629036 FAM19A2Q8N3H0 131 aa6.87□□□□□ -1.31
DDX41-219ENST00000629036 COX7B2Q8TF08 81 aa6.87□□□□□ -1.31
DDX41-219ENST00000629036 TRAV12-1A0A0B4J245 112 aa6.86□□□□□ -1.31
DDX41-219ENST00000629036 PHF5AQ7RTV0 110 aaKnown RBP6.86□□□□□ -1.31
DDX41-219ENST00000629036 IFI27L1Q96BM0 104 aa6.86□□□□□ -1.31
DDX41-219ENST00000629036 DPH3Q96FX2 82 aa6.86□□□□□ -1.31
DDX41-219ENST00000629036 PACRGQ96M98 296 aaPredicted RBP6.86□□□□□ -1.31
DDX41-219ENST00000629036 LRP2P98164 4655 aa6.85□□□□□ -1.31
DDX41-219ENST00000629036 PRSS2P07478 247 aa6.85□□□□□ -1.31
DDX41-219ENST00000629036 CXCL5P42830 114 aa6.85□□□□□ -1.31
DDX41-219ENST00000629036 C6orf226Q5I0X4 101 aa6.85□□□□□ -1.31
DDX41-219ENST00000629036 BAGE3Q86Y29 109 aa6.85□□□□□ -1.31
DDX41-219ENST00000629036 C7orf33Q8WU49 177 aa6.85□□□□□ -1.31
DDX41-219ENST00000629036 MT1HL1P0DM35 61 aa6.84□□□□□ -1.31
DDX41-219ENST00000629036 CKS1BP61024 79 aa6.84□□□□□ -1.31
DDX41-219ENST00000629036 GAGE2EQ4V326 116 aa6.84□□□□□ -1.31
DDX41-219ENST00000629036 GAGE2DQ9UEU5 116 aa6.84□□□□□ -1.31
DDX41-219ENST00000629036 HSBP1O75506 76 aa6.83□□□□□ -1.32
DDX41-219ENST00000629036 NDUFA6P56556 154 aa6.83□□□□□ -1.32
DDX41-219ENST00000629036 SRSF9Q13242 221 aaKnown RBP eCLIP6.83□□□□□ -1.32
DDX41-219ENST00000629036 ODF1Q14990 250 aa6.83□□□□□ -1.32
DDX41-219ENST00000629036 PSORS1C2Q9UIG4 136 aa6.83□□□□□ -1.32
DDX41-219ENST00000629036 CHTOPQ9Y3Y2 248 aaKnown RBP6.83□□□□□ -1.32
DDX41-219ENST00000629036 H3BRM9 83 aa6.82□□□□□ -1.32
DDX41-219ENST00000629036 HIST1H2BKO60814 126 aa6.82□□□□□ -1.32
DDX41-219ENST00000629036 OXTP01178 125 aa6.82□□□□□ -1.32
DDX41-219ENST00000629036 HIST1H2BJP06899 126 aa6.82□□□□□ -1.32
DDX41-219ENST00000629036 HIST1H2BOP23527 126 aa6.82□□□□□ -1.32
DDX41-219ENST00000629036 HIST1H2BBP33778 126 aa6.82□□□□□ -1.32
DDX41-219ENST00000629036 HIST1H2BDP58876 126 aa6.82□□□□□ -1.32
DDX41-219ENST00000629036 HIST1H2BCP62807 126 aa6.82□□□□□ -1.32
DDX41-219ENST00000629036 HIST2H2BEQ16778 126 aa6.82□□□□□ -1.32
DDX41-219ENST00000629036 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.82□□□□□ -1.32
DDX41-219ENST00000629036 FAM19A5Q7Z5A7 132 aaPredicted RBP6.82□□□□□ -1.32
DDX41-219ENST00000629036 HIST1H2BHQ93079 126 aa6.82□□□□□ -1.32
DDX41-219ENST00000629036 ZNF625Q96I27 306 aaPredicted RBP6.82□□□□□ -1.32
DDX41-219ENST00000629036 HIST1H2BNQ99877 126 aa6.82□□□□□ -1.32
DDX41-219ENST00000629036 HIST1H2BMQ99879 126 aa6.82□□□□□ -1.32
DDX41-219ENST00000629036 TMEM223A0PJW6 202 aa6.81□□□□□ -1.32
DDX41-219ENST00000629036 XAGE1AQ9HD64 81 aa6.81□□□□□ -1.32
DDX41-219ENST00000629036 M0QXV9 152 aa6.8□□□□□ -1.32
DDX41-219ENST00000629036 TMEM170BQ5T4T1 132 aa6.79□□□□□ -1.32
DDX41-219ENST00000629036 Q8NDZ9 215 aa6.79□□□□□ -1.32
DDX41-219ENST00000629036 IGLV5-37A0A075B6J1 123 aa6.78□□□□□ -1.32
DDX41-219ENST00000629036 LEPROTL1O95214 131 aa6.78□□□□□ -1.32
DDX41-219ENST00000629036 TSPEAR-AS2P59090 65 aa6.78□□□□□ -1.32
DDX41-219ENST00000629036 COA6Q5JTJ3 125 aaKnown RBP6.77□□□□□ -1.33
DDX41-219ENST00000629036 TP73-AS1Q9UF72 201 aa6.77□□□□□ -1.33
DDX41-219ENST00000629036 C22orf24Q9Y442 160 aa6.77□□□□□ -1.33
DDX41-219ENST00000629036 SPINK6Q6UWN8 80 aa6.76□□□□□ -1.33
DDX41-219ENST00000629036 ERG28Q9UKR5 140 aa6.76□□□□□ -1.33
DDX41-219ENST00000629036 IGLV7-43P04211 117 aa6.75□□□□□ -1.33
DDX41-219ENST00000629036 FABP4P15090 132 aa6.75□□□□□ -1.33
DDX41-219ENST00000629036 C1orf137Q5JT78 98 aa6.75□□□□□ -1.33
DDX41-219ENST00000629036 LINC01600Q96MT4 127 aa6.75□□□□□ -1.33
DDX41-219ENST00000629036 SND1-IT1Q9HBX3 110 aa6.75□□□□□ -1.33
DDX41-219ENST00000629036 HSPB8Q9UJY1 196 aa6.75□□□□□ -1.33
DDX41-219ENST00000629036 H0Y8G0 127 aa6.74□□□□□ -1.33
DDX41-219ENST00000629036 VPREB1P12018 145 aa6.74□□□□□ -1.33
DDX41-219ENST00000629036 COX17Q14061 63 aa6.74□□□□□ -1.33
DDX41-219ENST00000629036 PMCHL2Q9BQD1 86 aa6.74□□□□□ -1.33
DDX41-219ENST00000629036 ATP6V1G1O75348 118 aa6.73□□□□□ -1.33
DDX41-219ENST00000629036 PLNP26678 52 aa6.73□□□□□ -1.33
DDX41-219ENST00000629036 PFN2P35080 140 aa6.73□□□□□ -1.33
DDX41-219ENST00000629036 SFTA2Q6UW10 78 aa6.73□□□□□ -1.33
DDX41-219ENST00000629036 MRPL55Q7Z7F7 128 aaKnown RBP6.73□□□□□ -1.33
DDX41-219ENST00000629036 DPM2O94777 84 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 245 ms