RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 KIAA0087Q14695 138 aa6.42□□□□□ -1.38
SOX2-OT-249ENST00000628810 ORAOV1Q8WV07 137 aa6.42□□□□□ -1.38
SOX2-OT-249ENST00000628810 C2orf48Q96LS8 159 aa6.42□□□□□ -1.38
SOX2-OT-249ENST00000628810 TMEM223A0PJW6 202 aa6.41□□□□□ -1.38
SOX2-OT-249ENST00000628810 F8WDY8 70 aa6.41□□□□□ -1.38
SOX2-OT-249ENST00000628810 IGKCP01834 107 aa6.41□□□□□ -1.38
SOX2-OT-249ENST00000628810 SPINK8P0C7L1 97 aa6.41□□□□□ -1.38
SOX2-OT-249ENST00000628810 KRTAP10-2P60368 255 aa6.41□□□□□ -1.38
SOX2-OT-249ENST00000628810 SPAG11BQ08648 103 aa6.41□□□□□ -1.38
SOX2-OT-249ENST00000628810 HIGD2BQ4VC39 106 aa6.41□□□□□ -1.38
SOX2-OT-249ENST00000628810 TMEM170BQ5T4T1 132 aa6.41□□□□□ -1.38
SOX2-OT-249ENST00000628810 Q8IZM0 81 aa6.41□□□□□ -1.38
SOX2-OT-249ENST00000628810 PMCHL2Q9BQD1 86 aa6.41□□□□□ -1.38
SOX2-OT-249ENST00000628810 KRTAP4-2Q9BYR5 136 aa6.41□□□□□ -1.38
SOX2-OT-249ENST00000628810 DNAH5Q8TE73 4624 aa6.4□□□□□ -1.38
SOX2-OT-249ENST00000628810 C20orf202A1L168 122 aa6.4□□□□□ -1.38
SOX2-OT-249ENST00000628810 ZNF561-AS1K7EIQ3 104 aa6.4□□□□□ -1.38
SOX2-OT-249ENST00000628810 SLPIP03973 132 aa6.4□□□□□ -1.38
SOX2-OT-249ENST00000628810 AKR1D1P51857 326 aa6.4□□□□□ -1.38
SOX2-OT-249ENST00000628810 PKHD1P08F94 4074 aa6.4□□□□□ -1.39
SOX2-OT-249ENST00000628810 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.39□□□□□ -1.39
SOX2-OT-249ENST00000628810 IGLV5-52A0A0A0MRZ9 124 aa6.38□□□□□ -1.39
SOX2-OT-249ENST00000628810 CXCL5P42830 114 aa6.38□□□□□ -1.39
SOX2-OT-249ENST00000628810 COX7B2Q8TF08 81 aa6.38□□□□□ -1.39
SOX2-OT-249ENST00000628810 LINC00526Q96FQ7 95 aa6.38□□□□□ -1.39
SOX2-OT-249ENST00000628810 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.37□□□□□ -1.39
SOX2-OT-249ENST00000628810 NDUFA1O15239 70 aa6.37□□□□□ -1.39
SOX2-OT-249ENST00000628810 PRSS2P07478 247 aa6.37□□□□□ -1.39
SOX2-OT-249ENST00000628810 SYCNQ0VAF6 134 aa6.37□□□□□ -1.39
SOX2-OT-249ENST00000628810 C9orf163Q8N9P6 203 aa6.37□□□□□ -1.39
SOX2-OT-249ENST00000628810 CARD19Q96LW7 228 aa6.37□□□□□ -1.39
SOX2-OT-249ENST00000628810 CAMK2N2Q96S95 79 aa6.37□□□□□ -1.39
SOX2-OT-249ENST00000628810 KRTAP4-11Q9BYQ6 195 aa6.37□□□□□ -1.39
SOX2-OT-249ENST00000628810 E9PLD3 99 aa6.36□□□□□ -1.39
SOX2-OT-249ENST00000628810 HERVK_113P61574 105 aa6.36□□□□□ -1.39
SOX2-OT-249ENST00000628810 RNF151Q2KHN1 245 aa6.36□□□□□ -1.39
SOX2-OT-249ENST00000628810 C6orf226Q5I0X4 101 aa6.36□□□□□ -1.39
SOX2-OT-249ENST00000628810 SFTA2Q6UW10 78 aa6.36□□□□□ -1.39
SOX2-OT-249ENST00000628810 Q6ZRU5 148 aa6.36□□□□□ -1.39
SOX2-OT-249ENST00000628810 TOMM7Q9P0U1 55 aa6.36□□□□□ -1.39
SOX2-OT-249ENST00000628810 TRBV30A0A0K0K1B3 111 aa6.35□□□□□ -1.39
SOX2-OT-249ENST00000628810 LEPROTO15243 131 aa6.35□□□□□ -1.39
SOX2-OT-249ENST00000628810 FUSP35637 526 aaKnown RBP eCLIP6.35□□□□□ -1.39
SOX2-OT-249ENST00000628810 ANKRD39Q53RE8 183 aa6.35□□□□□ -1.39
SOX2-OT-249ENST00000628810 C10orf25Q5T742 122 aa6.35□□□□□ -1.39
SOX2-OT-249ENST00000628810 C2orf82Q6UX34 121 aa6.35□□□□□ -1.39
SOX2-OT-249ENST00000628810 EPPK1P58107 5090 aaKnown RBP6.34□□□□□ -1.39
SOX2-OT-249ENST00000628810 DYNC1H1Q14204 4646 aaKnown RBP6.34□□□□□ -1.39
SOX2-OT-249ENST00000628810 TSPEAR-AS2P59090 65 aa6.34□□□□□ -1.39
SOX2-OT-249ENST00000628810 CKS1BP61024 79 aa6.34□□□□□ -1.39
SOX2-OT-249ENST00000628810 JOSD1Q15040 202 aaPredicted RBP6.34□□□□□ -1.39
SOX2-OT-249ENST00000628810 LCE5AQ5TCM9 118 aa6.34□□□□□ -1.39
SOX2-OT-249ENST00000628810 UNQ6190/PRO20217Q6UXQ8 127 aa6.34□□□□□ -1.39
SOX2-OT-249ENST00000628810 PLEKHB2Q96CS7 222 aa6.34□□□□□ -1.39
SOX2-OT-249ENST00000628810 ZNF625Q96I27 306 aaPredicted RBP6.34□□□□□ -1.39
SOX2-OT-249ENST00000628810 C6orf48Q9UBA6 75 aa6.34□□□□□ -1.39
SOX2-OT-249ENST00000628810 PKIGQ9Y2B9 76 aa6.34□□□□□ -1.39
SOX2-OT-249ENST00000628810 C16orf90A8MZG2 172 aa6.33□□□□□ -1.4
SOX2-OT-249ENST00000628810 J3QQQ9 107 aa6.33□□□□□ -1.4
SOX2-OT-249ENST00000628810 TLX1NBP0CAT3 122 aa6.33□□□□□ -1.4
SOX2-OT-249ENST00000628810 GCSHP23434 173 aa6.33□□□□□ -1.4
SOX2-OT-249ENST00000628810 ATOH7Q8N100 152 aa6.33□□□□□ -1.4
SOX2-OT-249ENST00000628810 STPG4Q8N801 248 aa6.33□□□□□ -1.4
SOX2-OT-249ENST00000628810 LRP1BQ9NZR2 4599 aa6.32□□□□□ -1.4
SOX2-OT-249ENST00000628810 SCGB1D1O95968 90 aa6.32□□□□□ -1.4
SOX2-OT-249ENST00000628810 NMUP48645 174 aa6.32□□□□□ -1.4
SOX2-OT-249ENST00000628810 KRTAP10-1P60331 282 aa6.32□□□□□ -1.4
SOX2-OT-249ENST00000628810 SDIM1Q6ZPB5 146 aa6.32□□□□□ -1.4
SOX2-OT-249ENST00000628810 Q6ZSA8 131 aa6.32□□□□□ -1.4
SOX2-OT-249ENST00000628810 DNAH8Q96JB1 4490 aa6.32□□□□□ -1.4
SOX2-OT-249ENST00000628810 IGKV2D-26A0A0A0MRZ7 120 aa6.31□□□□□ -1.4
SOX2-OT-249ENST00000628810 LOC107984640A0A0U1RRK4 108 aa6.31□□□□□ -1.4
SOX2-OT-249ENST00000628810 HERV-K104P63124 156 aa6.31□□□□□ -1.4
SOX2-OT-249ENST00000628810 CIRBPQ14011 172 aaKnown RBP6.31□□□□□ -1.4
SOX2-OT-249ENST00000628810 LINC01620Q4KN68 170 aa6.31□□□□□ -1.4
SOX2-OT-249ENST00000628810 NDUFA12Q9UI09 145 aa6.31□□□□□ -1.4
SOX2-OT-249ENST00000628810 NDUFC2-KCTD14E9PQ53 114 aa6.3□□□□□ -1.4
SOX2-OT-249ENST00000628810 LGALS3P17931 250 aaKnown RBP6.3□□□□□ -1.4
SOX2-OT-249ENST00000628810 PYY3Q5JQD4 70 aa6.3□□□□□ -1.4
SOX2-OT-249ENST00000628810 A0A096LNI7 61 aa6.29□□□□□ -1.4
SOX2-OT-249ENST00000628810 MYMXA0A1B0GTQ4 84 aa6.29□□□□□ -1.4
SOX2-OT-249ENST00000628810 COX17Q14061 63 aa6.29□□□□□ -1.4
SOX2-OT-249ENST00000628810 MAJINQ3KP22 176 aa6.29□□□□□ -1.4
SOX2-OT-249ENST00000628810 C9orf116Q5BN46 136 aaPredicted RBP6.29□□□□□ -1.4
SOX2-OT-249ENST00000628810 KRTAP9-3Q9BYQ3 159 aa6.29□□□□□ -1.4
SOX2-OT-249ENST00000628810 ERG28Q9UKR5 140 aa6.29□□□□□ -1.4
SOX2-OT-249ENST00000628810 HSBP1L1C9JCN9 74 aa6.28□□□□□ -1.4
SOX2-OT-249ENST00000628810 PTTG1IPP53801 180 aa6.28□□□□□ -1.4
SOX2-OT-249ENST00000628810 Q6ZRP5 223 aa6.28□□□□□ -1.4
SOX2-OT-249ENST00000628810 SPACA4Q8TDM5 124 aa6.28□□□□□ -1.4
SOX2-OT-249ENST00000628810 LINC00474Q9P2X8 69 aa6.28□□□□□ -1.4
SOX2-OT-249ENST00000628810 LINC00587B1AMM8 73 aa6.27□□□□□ -1.41
SOX2-OT-249ENST00000628810 PANO1I0J062 215 aa6.27□□□□□ -1.41
SOX2-OT-249ENST00000628810 RPL18AQ02543 176 aaKnown RBP6.27□□□□□ -1.41
SOX2-OT-249ENST00000628810 FAM30AQ9NZY2 134 aa6.27□□□□□ -1.41
SOX2-OT-249ENST00000628810 APOBP04114 4563 aaKnown RBP6.26□□□□□ -1.41
SOX2-OT-249ENST00000628810 A0A0J9YXY3 114 aa6.26□□□□□ -1.41
SOX2-OT-249ENST00000628810 LOC105371267A0A1B0GV96 52 aa6.26□□□□□ -1.41
SOX2-OT-249ENST00000628810 ZNF815PA8K554 130 aa6.26□□□□□ -1.41
SOX2-OT-249ENST00000628810 EPM2AB3EWF7 344 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms