RNA–Protein interactions for RNA: ENST00000624071.1

LINC01006-208, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

Gene LINC01006, Length 651 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-208ENST00000624071 CKS1BP61024 79 aa11.94□□□□□ -0.5
LINC01006-208ENST00000624071 C9orf116Q5BN46 136 aaPredicted RBP11.94□□□□□ -0.5
LINC01006-208ENST00000624071 GAGE2EQ4V326 116 aa11.93□□□□□ -0.5
LINC01006-208ENST00000624071 Q6ZRP5 223 aa11.93□□□□□ -0.5
LINC01006-208ENST00000624071 Q8IZM0 81 aa11.93□□□□□ -0.5
LINC01006-208ENST00000624071 GAGE2DQ9UEU5 116 aa11.93□□□□□ -0.5
LINC01006-208ENST00000624071 MYCBP2O75592 4640 aa11.92□□□□□ -0.5
LINC01006-208ENST00000624071 IGLV5-45A0A087WSX0 123 aa11.92□□□□□ -0.5
LINC01006-208ENST00000624071 TRBV30A0A0K0K1B3 111 aa11.92□□□□□ -0.5
LINC01006-208ENST00000624071 SMIM1B2RUZ4 78 aa11.92□□□□□ -0.5
LINC01006-208ENST00000624071 SPINK8P0C7L1 97 aa11.92□□□□□ -0.5
LINC01006-208ENST00000624071 BAGE3Q86Y29 109 aa11.92□□□□□ -0.5
LINC01006-208ENST00000624071 CHCHD1Q96BP2 118 aaKnown RBP11.92□□□□□ -0.5
LINC01006-208ENST00000624071 COLCA2A8K830 154 aa11.91□□□□□ -0.5
LINC01006-208ENST00000624071 ATP5LO75964 103 aa11.91□□□□□ -0.5
LINC01006-208ENST00000624071 TLX1NBP0CAT3 122 aa11.91□□□□□ -0.5
LINC01006-208ENST00000624071 SCO1O75880 301 aa11.89□□□□□ -0.51
LINC01006-208ENST00000624071 IGLC3P0DOY3 106 aa11.89□□□□□ -0.51
LINC01006-208ENST00000624071 COX7B2Q8TF08 81 aa11.89□□□□□ -0.51
LINC01006-208ENST00000624071 FAM168BA1KXE4 195 aa11.88□□□□□ -0.51
LINC01006-208ENST00000624071 HSBP1O75506 76 aa11.88□□□□□ -0.51
LINC01006-208ENST00000624071 FAM19A2Q8N3H0 131 aa11.88□□□□□ -0.51
LINC01006-208ENST00000624071 NDUFC2-KCTD14E9PQ53 114 aa11.87□□□□□ -0.51
LINC01006-208ENST00000624071 H3BRM9 83 aa11.87□□□□□ -0.51
LINC01006-208ENST00000624071 F8VRH5 84 aa11.86□□□□□ -0.51
LINC01006-208ENST00000624071 J3QL48 77 aa11.86□□□□□ -0.51
LINC01006-208ENST00000624071 ZNF22P17026 224 aaPredicted RBP11.86□□□□□ -0.51
LINC01006-208ENST00000624071 PRR3P79522 188 aaKnown RBP11.86□□□□□ -0.51
LINC01006-208ENST00000624071 PHF5AQ7RTV0 110 aaKnown RBP11.86□□□□□ -0.51
LINC01006-208ENST00000624071 FAM19A5Q7Z5A7 132 aaPredicted RBP11.85□□□□□ -0.51
LINC01006-208ENST00000624071 IFI27L1Q96BM0 104 aa11.85□□□□□ -0.51
LINC01006-208ENST00000624071 C11orf86A6NJI1 115 aa11.84□□□□□ -0.51
LINC01006-208ENST00000624071 SERF1AO75920 110 aa11.84□□□□□ -0.51
LINC01006-208ENST00000624071 CXCL5P42830 114 aa11.84□□□□□ -0.51
LINC01006-208ENST00000624071 CHTOPQ9Y3Y2 248 aaKnown RBP11.84□□□□□ -0.51
LINC01006-208ENST00000624071 LINC00310P59036 64 aa11.83□□□□□ -0.52
LINC01006-208ENST00000624071 C9orf129Q5T035 196 aaKnown RBP11.83□□□□□ -0.52
LINC01006-208ENST00000624071 KRTAP29-1A8MX34 341 aaPredicted RBP11.82□□□□□ -0.52
LINC01006-208ENST00000624071 TMEM170BQ5T4T1 132 aa11.82□□□□□ -0.52
LINC01006-208ENST00000624071 XAGE1AQ9HD64 81 aa11.82□□□□□ -0.52
LINC01006-208ENST00000624071 NUPR1O60356 82 aa11.81□□□□□ -0.52
LINC01006-208ENST00000624071 KRTAP7-1Q8IUC3 87 aa11.81□□□□□ -0.52
LINC01006-208ENST00000624071 DMBT1Q9UGM3 2413 aaPredicted RBP11.8□□□□□ -0.52
LINC01006-208ENST00000624071 IGLV5-39A0A0G2JS06 123 aa11.8□□□□□ -0.52
LINC01006-208ENST00000624071 TRAV12-1A0A0B4J245 112 aa11.79□□□□□ -0.52
LINC01006-208ENST00000624071 H0Y8G0 127 aa11.79□□□□□ -0.52
LINC01006-208ENST00000624071 LRP1Q07954 4544 aaKnown RBP11.79□□□□□ -0.52
LINC01006-208ENST00000624071 PKHD1L1Q86WI1 4243 aa11.78□□□□□ -0.52
LINC01006-208ENST00000624071 M0QXV9 152 aa11.78□□□□□ -0.52
LINC01006-208ENST00000624071 PSORS1C2Q9UIG4 136 aa11.78□□□□□ -0.52
LINC01006-208ENST00000624071 LEPROTL1O95214 131 aa11.77□□□□□ -0.53
LINC01006-208ENST00000624071 OXTP01178 125 aa11.77□□□□□ -0.53
LINC01006-208ENST00000624071 KRTAP11-1Q8IUC1 163 aa11.77□□□□□ -0.53
LINC01006-208ENST00000624071 HERC1Q15751 4861 aa11.77□□□□□ -0.53
LINC01006-208ENST00000624071 FABP4P15090 132 aa11.76□□□□□ -0.53
LINC01006-208ENST00000624071 SERTAD4-AS1Q5TG53 156 aa11.76□□□□□ -0.53
LINC01006-208ENST00000624071 FAT3Q8TDW7 4589 aa11.75□□□□□ -0.53
LINC01006-208ENST00000624071 C1orf137Q5JT78 98 aa11.74□□□□□ -0.53
LINC01006-208ENST00000624071 ZNF625Q96I27 306 aaPredicted RBP11.74□□□□□ -0.53
LINC01006-208ENST00000624071 TMEM223A0PJW6 202 aa11.73□□□□□ -0.53
LINC01006-208ENST00000624071 PFN2P35080 140 aa11.73□□□□□ -0.53
LINC01006-208ENST00000624071 UBE2BP63146 152 aa11.73□□□□□ -0.53
LINC01006-208ENST00000624071 HIST1H2BKO60814 126 aa11.72□□□□□ -0.53
LINC01006-208ENST00000624071 HIST1H2BJP06899 126 aa11.72□□□□□ -0.53
LINC01006-208ENST00000624071 HIST1H2BOP23527 126 aa11.72□□□□□ -0.53
LINC01006-208ENST00000624071 HIST1H2BBP33778 126 aa11.72□□□□□ -0.53
LINC01006-208ENST00000624071 HIST1H2BDP58876 126 aa11.72□□□□□ -0.53
LINC01006-208ENST00000624071 HIST1H2BCP62807 126 aa11.72□□□□□ -0.53
LINC01006-208ENST00000624071 ODF1Q14990 250 aa11.72□□□□□ -0.53
LINC01006-208ENST00000624071 HIST2H2BEQ16778 126 aa11.72□□□□□ -0.53
LINC01006-208ENST00000624071 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.72□□□□□ -0.53
LINC01006-208ENST00000624071 HIST1H2BHQ93079 126 aa11.72□□□□□ -0.53
LINC01006-208ENST00000624071 HIST1H2BNQ99877 126 aa11.72□□□□□ -0.53
LINC01006-208ENST00000624071 HIST1H2BMQ99879 126 aa11.72□□□□□ -0.53
LINC01006-208ENST00000624071 SRSF9Q13242 221 aaKnown RBP eCLIP11.71□□□□□ -0.53
LINC01006-208ENST00000624071 HSPB8Q9UJY1 196 aa11.71□□□□□ -0.53
LINC01006-208ENST00000624071 C22orf24Q9Y442 160 aa11.71□□□□□ -0.53
LINC01006-208ENST00000624071 SPINK6Q6UWN8 80 aa11.7□□□□□ -0.54
LINC01006-208ENST00000624071 PMCHL2Q9BQD1 86 aa11.69□□□□□ -0.54
LINC01006-208ENST00000624071 ERG28Q9UKR5 140 aa11.69□□□□□ -0.54
LINC01006-208ENST00000624071 IGLV7-43P04211 117 aa11.66□□□□□ -0.54
LINC01006-208ENST00000624071 LBHQ53QV2 105 aaPredicted RBP11.66□□□□□ -0.54
LINC01006-208ENST00000624071 A0A0U1RRA0 63 aa11.64□□□□□ -0.55
LINC01006-208ENST00000624071 GAGE10A6NGK3 116 aa11.64□□□□□ -0.55
LINC01006-208ENST00000624071 MT1HL1P0DM35 61 aa11.64□□□□□ -0.55
LINC01006-208ENST00000624071 SFTA2Q6UW10 78 aa11.64□□□□□ -0.55
LINC01006-208ENST00000624071 MRPL55Q7Z7F7 128 aaKnown RBP11.64□□□□□ -0.55
LINC01006-208ENST00000624071 MAP1LC3CQ9BXW4 147 aa11.64□□□□□ -0.55
LINC01006-208ENST00000624071 SND1-IT1Q9HBX3 110 aa11.64□□□□□ -0.55
LINC01006-208ENST00000624071 DPM2O94777 84 aa11.63□□□□□ -0.55
LINC01006-208ENST00000624071 PLA2G2DQ9UNK4 145 aa11.63□□□□□ -0.55
LINC01006-208ENST00000624071 PLNP26678 52 aa11.62□□□□□ -0.55
LINC01006-208ENST00000624071 LINC00158P58513 81 aa11.62□□□□□ -0.55
LINC01006-208ENST00000624071 COX17Q14061 63 aa11.62□□□□□ -0.55
LINC01006-208ENST00000624071 REG3GQ6UW15 175 aa11.62□□□□□ -0.55
LINC01006-208ENST00000624071 TP73-AS1Q9UF72 201 aa11.62□□□□□ -0.55
LINC01006-208ENST00000624071 RPL37AP8A6NKH3 93 aa11.61□□□□□ -0.55
LINC01006-208ENST00000624071 NKAPP1Q8N9T2 125 aa11.61□□□□□ -0.55
LINC01006-208ENST00000624071 LINC00167Q96N53 147 aa11.61□□□□□ -0.55
LINC01006-208ENST00000624071 IGKCP01834 107 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms