RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 LINC00643Q86TS7 51 aa9.16□□□□□ -0.94
MSH6-215ENST00000622629 CCL18P55774 89 aa9.16□□□□□ -0.94
MSH6-215ENST00000622629 PRO0461Q9UI25 63 aa9.16□□□□□ -0.94
MSH6-215ENST00000622629 F8WDY8 70 aa9.15□□□□□ -0.94
MSH6-215ENST00000622629 VPREB1P12018 145 aa9.15□□□□□ -0.94
MSH6-215ENST00000622629 SMIM11BQ8TCY0 68 aa9.15□□□□□ -0.94
MSH6-215ENST00000622629 XAGE1AQ9HD64 81 aa9.15□□□□□ -0.95
MSH6-215ENST00000622629 ATRQ13535 2644 aa9.15□□□□□ -0.95
MSH6-215ENST00000622629 IGHV4-28A0A0C4DH34 117 aa9.14□□□□□ -0.95
MSH6-215ENST00000622629 PSCAO43653 123 aa9.14□□□□□ -0.95
MSH6-215ENST00000622629 DEFB105AQ8NG35 78 aa9.14□□□□□ -0.95
MSH6-215ENST00000622629 NTM-AS1Q6ZSK4 140 aa9.14□□□□□ -0.95
MSH6-215ENST00000622629 UBE2DNLQ8IWF7 75 aa9.14□□□□□ -0.95
MSH6-215ENST00000622629 A0A1B0GX51 115 aa9.14□□□□□ -0.95
MSH6-215ENST00000622629 FHL2Q14192 279 aa9.13□□□□□ -0.95
MSH6-215ENST00000622629 Q8N2B8 174 aa9.13□□□□□ -0.95
MSH6-215ENST00000622629 C6orf99Q4VX62 202 aa9.13□□□□□ -0.95
MSH6-215ENST00000622629 SDIM1Q6ZPB5 146 aa9.12□□□□□ -0.95
MSH6-215ENST00000622629 JMJD7-PLA2G4BH0Y9G9 81 aa9.12□□□□□ -0.95
MSH6-215ENST00000622629 FAM236DA0A1B0GTK5 79 aa9.12□□□□□ -0.95
MSH6-215ENST00000622629 FAM236CP0DP71 79 aa9.12□□□□□ -0.95
MSH6-215ENST00000622629 UNC79Q9P2D8 2635 aa9.11□□□□□ -0.95
MSH6-215ENST00000622629 CDIP1Q9H305 208 aa9.11□□□□□ -0.95
MSH6-215ENST00000622629 TMEM256-PLSCR3K7ERE1 68 aa9.11□□□□□ -0.95
MSH6-215ENST00000622629 CD164L2Q6UWJ8 174 aa9.11□□□□□ -0.95
MSH6-215ENST00000622629 PRR3P79522 188 aaKnown RBP9.1□□□□□ -0.95
MSH6-215ENST00000622629 RBM3P98179 157 aaKnown RBP9.1□□□□□ -0.95
MSH6-215ENST00000622629 FAM19A5Q7Z5A7 132 aaPredicted RBP9.1□□□□□ -0.95
MSH6-215ENST00000622629 C9orf116Q5BN46 136 aaPredicted RBP9.09□□□□□ -0.95
MSH6-215ENST00000622629 RELNP78509 3460 aa9.09□□□□□ -0.95
MSH6-215ENST00000622629 A0A087WZ39 114 aa9.09□□□□□ -0.95
MSH6-215ENST00000622629 DIRC1Q969H9 104 aa9.09□□□□□ -0.95
MSH6-215ENST00000622629 CCDC179H3BU77 68 aa9.09□□□□□ -0.95
MSH6-215ENST00000622629 MIFP14174 115 aa9.09□□□□□ -0.95
MSH6-215ENST00000622629 ITPR1Q14643 2758 aa9.08□□□□□ -0.96
MSH6-215ENST00000622629 FSHBP01225 129 aa9.08□□□□□ -0.96
MSH6-215ENST00000622629 TEX15Q9BXT5 2789 aa9.08□□□□□ -0.96
MSH6-215ENST00000622629 ATOX1O00244 68 aa9.08□□□□□ -0.96
MSH6-215ENST00000622629 IGLV5-39A0A0G2JS06 123 aa9.07□□□□□ -0.96
MSH6-215ENST00000622629 hADV29S1A0JD25 119 aa9.07□□□□□ -0.96
MSH6-215ENST00000622629 GCN1Q92616 2671 aaKnown RBP9.07□□□□□ -0.96
MSH6-215ENST00000622629 F8WEM9 126 aa9.06□□□□□ -0.96
MSH6-215ENST00000622629 KIR2DL5BQ8NHK3 375 aa9.06□□□□□ -0.96
MSH6-215ENST00000622629 BAHCC1Q9P281 2608 aa9.06□□□□□ -0.96
MSH6-215ENST00000622629 LOC107984640A0A0U1RRK4 108 aa9.06□□□□□ -0.96
MSH6-215ENST00000622629 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.06□□□□□ -0.96
MSH6-215ENST00000622629 Q8IZM0 81 aa9.06□□□□□ -0.96
MSH6-215ENST00000622629 FHL3Q13643 280 aa9.05□□□□□ -0.96
MSH6-215ENST00000622629 UNQ6190/PRO20217Q6UXQ8 127 aa9.05□□□□□ -0.96
MSH6-215ENST00000622629 LINC00337Q8N6G1 96 aa9.05□□□□□ -0.96
MSH6-215ENST00000622629 A0A096LNT2 108 aa9.04□□□□□ -0.96
MSH6-215ENST00000622629 RPL28P46779 137 aaKnown RBP9.04□□□□□ -0.96
MSH6-215ENST00000622629 SOSTDC1Q6X4U4 206 aa9.04□□□□□ -0.96
MSH6-215ENST00000622629 C16orf95Q9H693 158 aa9.04□□□□□ -0.96
MSH6-215ENST00000622629 TRAV23DV6A0A075B6W5 121 aa9.04□□□□□ -0.96
MSH6-215ENST00000622629 A0A087WYN8 130 aa9.04□□□□□ -0.96
MSH6-215ENST00000622629 IGHV4-30-4P0DP06 118 aa9.04□□□□□ -0.96
MSH6-215ENST00000622629 IGHV3OR16-9A0A0B4J2B5 98 aa9.03□□□□□ -0.96
MSH6-215ENST00000622629 ETDCA0A1B0GVM5 59 aa9.03□□□□□ -0.96
MSH6-215ENST00000622629 COX7BP24311 80 aa9.03□□□□□ -0.96
MSH6-215ENST00000622629 CYSRT1A8MQ03 144 aa9.03□□□□□ -0.96
MSH6-215ENST00000622629 EIF4EBP3O60516 100 aaPredicted RBP9.03□□□□□ -0.96
MSH6-215ENST00000622629 LELP1Q5T871 98 aa9.03□□□□□ -0.96
MSH6-215ENST00000622629 C11orf45Q8TAV5 145 aa9.03□□□□□ -0.96
MSH6-215ENST00000622629 MGAM2Q2M2H8 2515 aa9.02□□□□□ -0.97
MSH6-215ENST00000622629 IGLV5-45A0A087WSX0 123 aa9.02□□□□□ -0.97
MSH6-215ENST00000622629 DEFB131BA0A096LNP1 70 aa9.02□□□□□ -0.97
MSH6-215ENST00000622629 UBE2BP63146 152 aa9.02□□□□□ -0.97
MSH6-215ENST00000622629 KPRPQ5T749 579 aaPredicted RBP9.02□□□□□ -0.97
MSH6-215ENST00000622629 Q6ZQY7 126 aa9.02□□□□□ -0.97
MSH6-215ENST00000622629 C4orf48Q5BLP8 95 aa9.02□□□□□ -0.97
MSH6-215ENST00000622629 RMI2Q96E14 147 aa9.02□□□□□ -0.97
MSH6-215ENST00000622629 LITAFQ99732 161 aa9.01□□□□□ -0.97
MSH6-215ENST00000622629 FAM240AA0A1B0GVK7 77 aa9.01□□□□□ -0.97
MSH6-215ENST00000622629 TMEM258P61165 79 aa9□□□□□ -0.97
MSH6-215ENST00000622629 ITPR2Q14571 2701 aa8.99□□□□□ -0.97
MSH6-215ENST00000622629 ZFHX4Q86UP3 3567 aa8.99□□□□□ -0.97
MSH6-215ENST00000622629 ENHOQ6UWT2 76 aa8.99□□□□□ -0.97
MSH6-215ENST00000622629 C6orf223Q8N319 242 aa8.99□□□□□ -0.97
MSH6-215ENST00000622629 ZANQ9Y493 2812 aa8.99□□□□□ -0.97
MSH6-215ENST00000622629 NBEAL2Q6ZNJ1 2754 aa8.98□□□□□ -0.97
MSH6-215ENST00000622629 SCXQ7RTU7 201 aa8.98□□□□□ -0.97
MSH6-215ENST00000622629 NREPQ16612 68 aa8.98□□□□□ -0.97
MSH6-215ENST00000622629 SBSPONQ8IVN8 264 aa8.98□□□□□ -0.97
MSH6-215ENST00000622629 ASH1LQ9NR48 2969 aaKnown RBP8.98□□□□□ -0.97
MSH6-215ENST00000622629 MAST4O15021 2626 aa8.98□□□□□ -0.97
MSH6-215ENST00000622629 PRO0628Q9UI54 55 aa8.98□□□□□ -0.97
MSH6-215ENST00000622629 A0A1B0GUV1 79 aa8.97□□□□□ -0.97
MSH6-215ENST00000622629 UQCRQO14949 82 aa8.97□□□□□ -0.97
MSH6-215ENST00000622629 IMUPQ9GZP8 106 aa8.97□□□□□ -0.97
MSH6-215ENST00000622629 A8MTW9 85 aa8.97□□□□□ -0.97
MSH6-215ENST00000622629 UPK3BQ9BT76 320 aa8.97□□□□□ -0.97
MSH6-215ENST00000622629 FAM218AQ96MZ4 157 aa8.96□□□□□ -0.97
MSH6-215ENST00000622629 PRB2P02812 416 aaPredicted RBP8.96□□□□□ -0.98
MSH6-215ENST00000622629 FUSP35637 526 aaKnown RBP eCLIP8.96□□□□□ -0.98
MSH6-215ENST00000622629 COX17Q14061 63 aa8.96□□□□□ -0.98
MSH6-215ENST00000622629 Q6Q795 121 aa8.96□□□□□ -0.98
MSH6-215ENST00000622629 IL17DQ8TAD2 202 aa8.96□□□□□ -0.98
MSH6-215ENST00000622629 UTP20O75691 2785 aaKnown RBP8.96□□□□□ -0.98
MSH6-215ENST00000622629 WFDC9Q8NEX5 89 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms