RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 COX7B2Q8TF08 81 aa7.17□□□□□ -1.26
VPS11-208ENST00000621676 EDA2RQ9HAV5 297 aa7.17□□□□□ -1.26
VPS11-208ENST00000621676 PTH2Q96A98 100 aa7.16□□□□□ -1.26
VPS11-208ENST00000621676 HUWE1Q7Z6Z7 4374 aaKnown RBP7.16□□□□□ -1.26
VPS11-208ENST00000621676 IGHV3OR16-9A0A0B4J2B5 98 aa7.16□□□□□ -1.26
VPS11-208ENST00000621676 COX7A2LO14548 114 aa7.16□□□□□ -1.26
VPS11-208ENST00000621676 CFC1BP0CG36 223 aa7.16□□□□□ -1.26
VPS11-208ENST00000621676 CFC1P0CG37 223 aa7.16□□□□□ -1.26
VPS11-208ENST00000621676 ENHOQ6UWT2 76 aa7.16□□□□□ -1.26
VPS11-208ENST00000621676 SEC11AP67812 179 aa7.15□□□□□ -1.26
VPS11-208ENST00000621676 LINC00612Q8N6U2 182 aa7.15□□□□□ -1.26
VPS11-208ENST00000621676 KLK5Q9Y337 293 aaPredicted RBP7.15□□□□□ -1.27
VPS11-208ENST00000621676 LINC00588Q9Y4M8 146 aa7.15□□□□□ -1.27
VPS11-208ENST00000621676 C9orf118A6NHY6 69 aa7.14□□□□□ -1.27
VPS11-208ENST00000621676 TMEM238C9JI98 176 aa7.14□□□□□ -1.27
VPS11-208ENST00000621676 FABP2P12104 132 aa7.14□□□□□ -1.27
VPS11-208ENST00000621676 SOSTDC1Q6X4U4 206 aa7.14□□□□□ -1.27
VPS11-208ENST00000621676 LELP1Q5T871 98 aa7.14□□□□□ -1.27
VPS11-208ENST00000621676 SH2D6Q7Z4S9 175 aa7.14□□□□□ -1.27
VPS11-208ENST00000621676 CLEC2BQ92478 149 aa7.14□□□□□ -1.27
VPS11-208ENST00000621676 WIPF1O43516 503 aa7.14□□□□□ -1.27
VPS11-208ENST00000621676 CIRBPQ14011 172 aaKnown RBP7.14□□□□□ -1.27
VPS11-208ENST00000621676 GTF2H5Q6ZYL4 71 aa7.14□□□□□ -1.27
VPS11-208ENST00000621676 SPAG11BQ08648 103 aa7.13□□□□□ -1.27
VPS11-208ENST00000621676 CCL18P55774 89 aa7.13□□□□□ -1.27
VPS11-208ENST00000621676 C1orf43Q9BWL3 253 aa7.13□□□□□ -1.27
VPS11-208ENST00000621676 ZNF561-AS1K7EIQ3 104 aa7.12□□□□□ -1.27
VPS11-208ENST00000621676 NCR3O14931 201 aa7.12□□□□□ -1.27
VPS11-208ENST00000621676 DPH3Q96FX2 82 aa7.12□□□□□ -1.27
VPS11-208ENST00000621676 K7EP34 96 aa7.12□□□□□ -1.27
VPS11-208ENST00000621676 PSCAO43653 123 aa7.11□□□□□ -1.27
VPS11-208ENST00000621676 RPL13AP40429 203 aaKnown RBP7.11□□□□□ -1.27
VPS11-208ENST00000621676 TRAV10A0A0B4J240 114 aa7.11□□□□□ -1.27
VPS11-208ENST00000621676 IGKV2-24A0A0C4DH68 120 aa7.11□□□□□ -1.27
VPS11-208ENST00000621676 TSPAN13O95857 204 aa7.11□□□□□ -1.27
VPS11-208ENST00000621676 WFDC2Q14508 124 aa7.11□□□□□ -1.27
VPS11-208ENST00000621676 DNAH10Q8IVF4 4471 aa7.11□□□□□ -1.27
VPS11-208ENST00000621676 A0A1W2PPM0 123 aa7.11□□□□□ -1.27
VPS11-208ENST00000621676 SIVA1O15304 175 aa7.11□□□□□ -1.27
VPS11-208ENST00000621676 TIRAPP58753 221 aa7.11□□□□□ -1.27
VPS11-208ENST00000621676 ETDBQ3ZM63 59 aa7.11□□□□□ -1.27
VPS11-208ENST00000621676 TM2D3Q9BRN9 247 aa7.11□□□□□ -1.27
VPS11-208ENST00000621676 ERG28Q9UKR5 140 aa7.1□□□□□ -1.27
VPS11-208ENST00000621676 CAMK2N2Q96S95 79 aa7.1□□□□□ -1.27
VPS11-208ENST00000621676 LINC00308Q8TCZ7 52 aa7.09□□□□□ -1.27
VPS11-208ENST00000621676 SND1-IT1Q9HBX3 110 aa7.09□□□□□ -1.27
VPS11-208ENST00000621676 PRO1854Q9UHT4 67 aa7.09□□□□□ -1.27
VPS11-208ENST00000621676 DNAH7Q8WXX0 4024 aa7.09□□□□□ -1.27
VPS11-208ENST00000621676 TM2D2Q9BX73 214 aa7.09□□□□□ -1.27
VPS11-208ENST00000621676 A0A087WZ39 114 aa7.08□□□□□ -1.28
VPS11-208ENST00000621676 CD164L2Q6UWJ8 174 aa7.08□□□□□ -1.28
VPS11-208ENST00000621676 LITAFQ99732 161 aa7.08□□□□□ -1.28
VPS11-208ENST00000621676 SMAGPQ0VAQ4 97 aa7.08□□□□□ -1.28
VPS11-208ENST00000621676 HIGD1BQ9P298 99 aa7.08□□□□□ -1.28
VPS11-208ENST00000621676 CSDC2Q9Y534 153 aaKnown RBP7.08□□□□□ -1.28
VPS11-208ENST00000621676 SLPIP03973 132 aa7.07□□□□□ -1.28
VPS11-208ENST00000621676 RPL18AQ02543 176 aaKnown RBP7.07□□□□□ -1.28
VPS11-208ENST00000621676 GAGE2BQ13066 116 aa7.07□□□□□ -1.28
VPS11-208ENST00000621676 KRTAP1-5Q9BYS1 174 aa7.07□□□□□ -1.28
VPS11-208ENST00000621676 LY6G6CO95867 125 aa7.07□□□□□ -1.28
VPS11-208ENST00000621676 A0A1B0GWB2 263 aa7.06□□□□□ -1.28
VPS11-208ENST00000621676 FOXI1Q12951 378 aa7.06□□□□□ -1.28
VPS11-208ENST00000621676 A0A1B0GUV1 79 aa7.06□□□□□ -1.28
VPS11-208ENST00000621676 C9JAW5 83 aa7.06□□□□□ -1.28
VPS11-208ENST00000621676 NDUFA1O15239 70 aa7.06□□□□□ -1.28
VPS11-208ENST00000621676 MIAQ16674 131 aa7.06□□□□□ -1.28
VPS11-208ENST00000621676 TCL1BO95988 128 aa7.06□□□□□ -1.28
VPS11-208ENST00000621676 DNAH10OSP0CZ25 163 aa7.06□□□□□ -1.28
VPS11-208ENST00000621676 HAMPP81172 84 aa7.06□□□□□ -1.28
VPS11-208ENST00000621676 IGLV5-39A0A0G2JS06 123 aa7.05□□□□□ -1.28
VPS11-208ENST00000621676 TEX48A0A1B0GUV7 120 aa7.05□□□□□ -1.28
VPS11-208ENST00000621676 Q6ZRU5 148 aa7.05□□□□□ -1.28
VPS11-208ENST00000621676 TRIAP1O43715 76 aa7.05□□□□□ -1.28
VPS11-208ENST00000621676 DNAH9Q9NYC9 4486 aa7.05□□□□□ -1.28
VPS11-208ENST00000621676 IGKV2-28A0A075B6P5 120 aa7.04□□□□□ -1.28
VPS11-208ENST00000621676 IGKV2D-28P01615 120 aa7.04□□□□□ -1.28
VPS11-208ENST00000621676 Q8NDZ9 215 aa7.04□□□□□ -1.28
VPS11-208ENST00000621676 LINC00337Q8N6G1 96 aa7.04□□□□□ -1.28
VPS11-208ENST00000621676 RPL37AP8A6NKH3 93 aa7.03□□□□□ -1.28
VPS11-208ENST00000621676 IGLV5-45A0A087WSX0 123 aa7.02□□□□□ -1.28
VPS11-208ENST00000621676 PLECQ15149 4684 aaKnown RBP7.02□□□□□ -1.29
VPS11-208ENST00000621676 S100A7L2Q5SY68 101 aa7.02□□□□□ -1.29
VPS11-208ENST00000621676 B9D2Q9BPU9 175 aa7.02□□□□□ -1.29
VPS11-208ENST00000621676 USP17L23D6RBM5 183 aa7.02□□□□□ -1.29
VPS11-208ENST00000621676 FAM168BA1KXE4 195 aa7.01□□□□□ -1.29
VPS11-208ENST00000621676 KIAA0087Q14695 138 aa7.01□□□□□ -1.29
VPS11-208ENST00000621676 C6orf48Q9UBA6 75 aa7.01□□□□□ -1.29
VPS11-208ENST00000621676 H7C423 109 aa7.01□□□□□ -1.29
VPS11-208ENST00000621676 STARD9Q9P2P6 4700 aa7□□□□□ -1.29
VPS11-208ENST00000621676 CHTF8P0CG12 524 aa7□□□□□ -1.29
VPS11-208ENST00000621676 SIGMAR1Q99720 223 aa7□□□□□ -1.29
VPS11-208ENST00000621676 KMT2AQ03164 3969 aa7□□□□□ -1.29
VPS11-208ENST00000621676 TAL2Q16559 108 aa6.99□□□□□ -1.29
VPS11-208ENST00000621676 FAM19A5Q7Z5A7 132 aaPredicted RBP6.99□□□□□ -1.29
VPS11-208ENST00000621676 SPANXB1Q9NS25 103 aaPredicted RBP6.98□□□□□ -1.29
VPS11-208ENST00000621676 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.98□□□□□ -1.29
VPS11-208ENST00000621676 SMIM11BQ8TCY0 68 aa6.98□□□□□ -1.29
VPS11-208ENST00000621676 C15orf56Q8N910 161 aa6.97□□□□□ -1.29
VPS11-208ENST00000621676 FAM218AQ96MZ4 157 aa6.97□□□□□ -1.29
VPS11-208ENST00000621676 Q8IZM0 81 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms