RNA–Protein interactions for RNA: ENST00000621097.4

RFC2-213, Transcript of replication factor C subunit 2, humanhuman

TSL 5 BASIC

Gene RFC2, Length 1,635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-213ENST00000621097 C10orf25Q5T742 122 aa12.4□□□□□ -0.42
RFC2-213ENST00000621097 UNQ6190/PRO20217Q6UXQ8 127 aa12.4□□□□□ -0.42
RFC2-213ENST00000621097 CAMK2N2Q96S95 79 aa12.4□□□□□ -0.42
RFC2-213ENST00000621097 EREGO14944 169 aa12.4□□□□□ -0.42
RFC2-213ENST00000621097 Q6ZRU5 148 aa12.4□□□□□ -0.42
RFC2-213ENST00000621097 ZNF625Q96I27 306 aaPredicted RBP12.4□□□□□ -0.42
RFC2-213ENST00000621097 VAMP8Q9BV40 100 aa12.4□□□□□ -0.42
RFC2-213ENST00000621097 TTTY13Q9BZ97 58 aa12.4□□□□□ -0.42
RFC2-213ENST00000621097 LGALS3P17931 250 aaKnown RBP12.39□□□□□ -0.43
RFC2-213ENST00000621097 CXCL5P42830 114 aa12.39□□□□□ -0.43
RFC2-213ENST00000621097 NMUP48645 174 aa12.39□□□□□ -0.43
RFC2-213ENST00000621097 CNBPP62633 177 aaKnown RBP12.39□□□□□ -0.43
RFC2-213ENST00000621097 SYCNQ0VAF6 134 aa12.39□□□□□ -0.43
RFC2-213ENST00000621097 PAM16Q9Y3D7 125 aa12.39□□□□□ -0.43
RFC2-213ENST00000621097 F8WDY8 70 aa12.38□□□□□ -0.43
RFC2-213ENST00000621097 NDUFA1O15239 70 aa12.38□□□□□ -0.43
RFC2-213ENST00000621097 FUSP35637 526 aaKnown RBP eCLIP12.38□□□□□ -0.43
RFC2-213ENST00000621097 NDUFA12Q9UI09 145 aa12.38□□□□□ -0.43
RFC2-213ENST00000621097 SMIM6P0DI80 62 aa12.37□□□□□ -0.43
RFC2-213ENST00000621097 KRTAP10-2P60368 255 aa12.37□□□□□ -0.43
RFC2-213ENST00000621097 PCP2Q8IVA1 136 aa12.37□□□□□ -0.43
RFC2-213ENST00000621097 C6orf48Q9UBA6 75 aa12.37□□□□□ -0.43
RFC2-213ENST00000621097 SPATA45Q537H7 98 aa12.36□□□□□ -0.43
RFC2-213ENST00000621097 CARD19Q96LW7 228 aa12.36□□□□□ -0.43
RFC2-213ENST00000621097 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.34□□□□□ -0.43
RFC2-213ENST00000621097 A0A1B0GVY2 172 aa12.34□□□□□ -0.43
RFC2-213ENST00000621097 MYMXA0A1B0GTQ4 84 aa12.33□□□□□ -0.43
RFC2-213ENST00000621097 C9orf116Q5BN46 136 aaPredicted RBP12.33□□□□□ -0.43
RFC2-213ENST00000621097 SFTA2Q6UW10 78 aa12.33□□□□□ -0.43
RFC2-213ENST00000621097 TRBV30A0A0K0K1B3 111 aa12.33□□□□□ -0.44
RFC2-213ENST00000621097 ZNF815PA8K554 130 aa12.33□□□□□ -0.44
RFC2-213ENST00000621097 C9orf163Q8N9P6 203 aa12.33□□□□□ -0.44
RFC2-213ENST00000621097 RNF151Q2KHN1 245 aa12.32□□□□□ -0.44
RFC2-213ENST00000621097 IGLV5-52A0A0A0MRZ9 124 aa12.31□□□□□ -0.44
RFC2-213ENST00000621097 HERV-K104P63124 156 aa12.31□□□□□ -0.44
RFC2-213ENST00000621097 S100A12P80511 92 aa12.31□□□□□ -0.44
RFC2-213ENST00000621097 LINC01620Q4KN68 170 aa12.31□□□□□ -0.44
RFC2-213ENST00000621097 PGPEP1Q9NXJ5 209 aa12.31□□□□□ -0.44
RFC2-213ENST00000621097 C14orf144Q96I85 54 aa12.3□□□□□ -0.44
RFC2-213ENST00000621097 COX8AP10176 69 aa12.29□□□□□ -0.44
RFC2-213ENST00000621097 TP73-AS1Q9UF72 201 aa12.29□□□□□ -0.44
RFC2-213ENST00000621097 DYNC1H1Q14204 4646 aaKnown RBP12.29□□□□□ -0.44
RFC2-213ENST00000621097 A0A0J9YXY3 114 aa12.29□□□□□ -0.44
RFC2-213ENST00000621097 ERG28Q9UKR5 140 aa12.29□□□□□ -0.44
RFC2-213ENST00000621097 BOD1L2Q8IYS8 172 aa12.28□□□□□ -0.44
RFC2-213ENST00000621097 C12orf57Q99622 126 aa12.28□□□□□ -0.44
RFC2-213ENST00000621097 DNAH5Q8TE73 4624 aa12.27□□□□□ -0.44
RFC2-213ENST00000621097 PFN2P35080 140 aa12.26□□□□□ -0.45
RFC2-213ENST00000621097 MEIG1Q5JSS6 88 aa12.26□□□□□ -0.45
RFC2-213ENST00000621097 SDIM1Q6ZPB5 146 aa12.26□□□□□ -0.45
RFC2-213ENST00000621097 LINC00518Q8N0U6 118 aa12.26□□□□□ -0.45
RFC2-213ENST00000621097 BIRC6Q9NR09 4857 aa12.25□□□□□ -0.45
RFC2-213ENST00000621097 A0A0U1RRA0 63 aa12.25□□□□□ -0.45
RFC2-213ENST00000621097 DLEU1O43261 78 aa12.25□□□□□ -0.45
RFC2-213ENST00000621097 TLX1NBP0CAT3 122 aa12.25□□□□□ -0.45
RFC2-213ENST00000621097 SMIM13P0DJ93 91 aa12.25□□□□□ -0.45
RFC2-213ENST00000621097 NDUFC2-KCTD14E9PQ53 114 aa12.24□□□□□ -0.45
RFC2-213ENST00000621097 COX17Q14061 63 aa12.24□□□□□ -0.45
RFC2-213ENST00000621097 Q6ZRP5 223 aa12.24□□□□□ -0.45
RFC2-213ENST00000621097 SCGB1D4Q6XE38 83 aa12.23□□□□□ -0.45
RFC2-213ENST00000621097 LOC107984640A0A0U1RRK4 108 aa12.22□□□□□ -0.45
RFC2-213ENST00000621097 LINC00158P58513 81 aa12.22□□□□□ -0.45
RFC2-213ENST00000621097 SLC25A34Q6PIV7 304 aa12.22□□□□□ -0.45
RFC2-213ENST00000621097 LITAFQ99732 161 aa12.22□□□□□ -0.45
RFC2-213ENST00000621097 LINC00587B1AMM8 73 aa12.22□□□□□ -0.45
RFC2-213ENST00000621097 GCSHP23434 173 aa12.22□□□□□ -0.45
RFC2-213ENST00000621097 ADAMTSL4-AS1Q5T5F5 129 aa12.22□□□□□ -0.45
RFC2-213ENST00000621097 RPL18AQ02543 176 aaKnown RBP12.21□□□□□ -0.46
RFC2-213ENST00000621097 LRP1BQ9NZR2 4599 aa12.2□□□□□ -0.46
RFC2-213ENST00000621097 A0A096LNI7 61 aa12.2□□□□□ -0.46
RFC2-213ENST00000621097 TIMM17BO60830 172 aa12.2□□□□□ -0.46
RFC2-213ENST00000621097 GAGE2BQ13066 116 aa12.2□□□□□ -0.46
RFC2-213ENST00000621097 GAGE2EQ4V326 116 aa12.2□□□□□ -0.46
RFC2-213ENST00000621097 DAND5Q8N907 189 aa12.2□□□□□ -0.46
RFC2-213ENST00000621097 PRO1933Q9H354 126 aa12.2□□□□□ -0.46
RFC2-213ENST00000621097 GAGE2DQ9UEU5 116 aa12.2□□□□□ -0.46
RFC2-213ENST00000621097 KRTAP10-1P60331 282 aa12.19□□□□□ -0.46
RFC2-213ENST00000621097 CIRBPQ14011 172 aaKnown RBP12.19□□□□□ -0.46
RFC2-213ENST00000621097 MIR7-3HGQ8N6C7 128 aa12.19□□□□□ -0.46
RFC2-213ENST00000621097 C16orf90A8MZG2 172 aa12.19□□□□□ -0.46
RFC2-213ENST00000621097 PTTG1IPP53801 180 aa12.19□□□□□ -0.46
RFC2-213ENST00000621097 SND1-IT1Q9HBX3 110 aa12.18□□□□□ -0.46
RFC2-213ENST00000621097 XAGE1AQ9HD64 81 aa12.18□□□□□ -0.46
RFC2-213ENST00000621097 IGKV2-24A0A0C4DH68 120 aa12.17□□□□□ -0.46
RFC2-213ENST00000621097 PANO1I0J062 215 aa12.17□□□□□ -0.46
RFC2-213ENST00000621097 CHTF8P0CG12 524 aa12.17□□□□□ -0.46
RFC2-213ENST00000621097 C2orf91Q6ZV80 131 aa12.17□□□□□ -0.46
RFC2-213ENST00000621097 PKIGQ9Y2B9 76 aa12.17□□□□□ -0.46
RFC2-213ENST00000621097 UQCR10Q9UDW1 63 aa12.16□□□□□ -0.46
RFC2-213ENST00000621097 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.16□□□□□ -0.46
RFC2-213ENST00000621097 TMEM238C9JI98 176 aa12.15□□□□□ -0.46
RFC2-213ENST00000621097 C9orf129Q5T035 196 aaKnown RBP12.15□□□□□ -0.46
RFC2-213ENST00000621097 EIF4EBP3O60516 100 aaPredicted RBP12.14□□□□□ -0.47
RFC2-213ENST00000621097 HIGD1BQ9P298 99 aa12.14□□□□□ -0.47
RFC2-213ENST00000621097 MIEN1Q9BRT3 115 aa12.13□□□□□ -0.47
RFC2-213ENST00000621097 SPANXDQ9BXN6 97 aa12.13□□□□□ -0.47
RFC2-213ENST00000621097 SPANXCQ9NY87 97 aa12.13□□□□□ -0.47
RFC2-213ENST00000621097 FAM30AQ9NZY2 134 aa12.13□□□□□ -0.47
RFC2-213ENST00000621097 SOSTDC1Q6X4U4 206 aa12.12□□□□□ -0.47
RFC2-213ENST00000621097 SPANXB1Q9NS25 103 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms