RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 UBE2V1Q13404 147 aa7.6□□□□□ -1.19
POLR2A-209ENST00000617998 C11orf21Q9P2W6 132 aa7.6□□□□□ -1.19
POLR2A-209ENST00000617998 PRYO14603 147 aa7.6□□□□□ -1.19
POLR2A-209ENST00000617998 LINC00528Q8N1L1 170 aa7.6□□□□□ -1.19
POLR2A-209ENST00000617998 Q6ZVQ6 151 aa7.59□□□□□ -1.19
POLR2A-209ENST00000617998 COLCA2A8K830 154 aa7.59□□□□□ -1.19
POLR2A-209ENST00000617998 E9PLD3 99 aa7.59□□□□□ -1.19
POLR2A-209ENST00000617998 NUPR1O60356 82 aa7.59□□□□□ -1.2
POLR2A-209ENST00000617998 DNAH10OSP0CZ25 163 aa7.59□□□□□ -1.2
POLR2A-209ENST00000617998 CRIP1P50238 77 aa7.59□□□□□ -1.2
POLR2A-209ENST00000617998 Q9BRP9 147 aa7.59□□□□□ -1.2
POLR2A-209ENST00000617998 PRLHP81277 87 aa7.58□□□□□ -1.2
POLR2A-209ENST00000617998 C5orf47Q569G3 176 aa7.58□□□□□ -1.2
POLR2A-209ENST00000617998 AGRNO00468 2067 aa7.58□□□□□ -1.2
POLR2A-209ENST00000617998 A8MZ25 164 aa7.58□□□□□ -1.2
POLR2A-209ENST00000617998 MUC4Q99102 2169 aa7.58□□□□□ -1.2
POLR2A-209ENST00000617998 CHTF8P0CG12 524 aa7.58□□□□□ -1.2
POLR2A-209ENST00000617998 HCFC1P51610 2035 aa7.58□□□□□ -1.2
POLR2A-209ENST00000617998 C22orf24Q9Y442 160 aa7.58□□□□□ -1.2
POLR2A-209ENST00000617998 A0A087WTM6 91 aa7.57□□□□□ -1.2
POLR2A-209ENST00000617998 WIPF1O43516 503 aa7.57□□□□□ -1.2
POLR2A-209ENST00000617998 COX8AP10176 69 aa7.57□□□□□ -1.2
POLR2A-209ENST00000617998 KRTAP21-3Q3LHN1 58 aa7.57□□□□□ -1.2
POLR2A-209ENST00000617998 FAM19A3Q7Z5A8 133 aa7.57□□□□□ -1.2
POLR2A-209ENST00000617998 ZNF22P17026 224 aaPredicted RBP7.57□□□□□ -1.2
POLR2A-209ENST00000617998 A0A0J9YXY3 114 aa7.56□□□□□ -1.2
POLR2A-209ENST00000617998 A0A0U1RQV1 116 aa7.56□□□□□ -1.2
POLR2A-209ENST00000617998 LCE6AA0A183 80 aa7.56□□□□□ -1.2
POLR2A-209ENST00000617998 ANKRD39Q53RE8 183 aa7.55□□□□□ -1.2
POLR2A-209ENST00000617998 CCKP06307 115 aa7.55□□□□□ -1.2
POLR2A-209ENST00000617998 Q6JHZ5 121 aa7.55□□□□□ -1.2
POLR2A-209ENST00000617998 TEX49A0A1B0GTD5 131 aa7.55□□□□□ -1.2
POLR2A-209ENST00000617998 APLNQ9ULZ1 77 aa7.55□□□□□ -1.2
POLR2A-209ENST00000617998 ATP11AUNQ6ZP68 121 aa7.55□□□□□ -1.2
POLR2A-209ENST00000617998 PHF5AQ7RTV0 110 aaKnown RBP7.54□□□□□ -1.2
POLR2A-209ENST00000617998 RETNLBQ9BQ08 111 aa7.54□□□□□ -1.2
POLR2A-209ENST00000617998 C11orf1Q9H5F2 150 aa7.54□□□□□ -1.2
POLR2A-209ENST00000617998 LINC00694P0DN24 101 aa7.53□□□□□ -1.2
POLR2A-209ENST00000617998 PTH2Q96A98 100 aa7.53□□□□□ -1.2
POLR2A-209ENST00000617998 TMEM223A0PJW6 202 aa7.53□□□□□ -1.2
POLR2A-209ENST00000617998 Q6ZQY7 126 aa7.53□□□□□ -1.2
POLR2A-209ENST00000617998 ETDBQ3ZM63 59 aa7.53□□□□□ -1.2
POLR2A-209ENST00000617998 TEP1Q99973 2627 aaKnown RBP7.53□□□□□ -1.2
POLR2A-209ENST00000617998 IGHV6-1A0A0B4J1U7 121 aa7.53□□□□□ -1.2
POLR2A-209ENST00000617998 MOBPQ13875 183 aa7.53□□□□□ -1.2
POLR2A-209ENST00000617998 K7ERJ3 54 aa7.52□□□□□ -1.2
POLR2A-209ENST00000617998 SMCR5Q8TEV8 140 aa7.52□□□□□ -1.21
POLR2A-209ENST00000617998 LINC00308Q8TCZ7 52 aa7.52□□□□□ -1.21
POLR2A-209ENST00000617998 ITPR3Q14573 2671 aa7.52□□□□□ -1.21
POLR2A-209ENST00000617998 TRBV10-3A0A0K0K1G6 114 aa7.52□□□□□ -1.21
POLR2A-209ENST00000617998 COL27A1Q8IZC6 1860 aaPredicted RBP7.51□□□□□ -1.21
POLR2A-209ENST00000617998 POLR2KP53803 58 aaKnown RBP7.51□□□□□ -1.21
POLR2A-209ENST00000617998 Q8N814 137 aa7.51□□□□□ -1.21
POLR2A-209ENST00000617998 CEP350Q5VT06 3117 aa7.51□□□□□ -1.21
POLR2A-209ENST00000617998 LINC00242Q5T6M2 205 aa7.5□□□□□ -1.21
POLR2A-209ENST00000617998 A0A087WYN8 130 aa7.5□□□□□ -1.21
POLR2A-209ENST00000617998 C11orf72Q8NBR9 251 aa7.5□□□□□ -1.21
POLR2A-209ENST00000617998 A0A1B0GXF2 115 aa7.5□□□□□ -1.21
POLR2A-209ENST00000617998 B5MCH6 92 aa7.5□□□□□ -1.21
POLR2A-209ENST00000617998 MRPS12O15235 138 aaKnown RBP7.49□□□□□ -1.21
POLR2A-209ENST00000617998 CLEC2BQ92478 149 aa7.49□□□□□ -1.21
POLR2A-209ENST00000617998 GOLGB1Q14789 3259 aaKnown RBP7.49□□□□□ -1.21
POLR2A-209ENST00000617998 FLNAP21333 2647 aaKnown RBP7.48□□□□□ -1.21
POLR2A-209ENST00000617998 LINC00173Q6ZV60 143 aa7.48□□□□□ -1.21
POLR2A-209ENST00000617998 NRACQ8N912 160 aa7.48□□□□□ -1.21
POLR2A-209ENST00000617998 LINC00304Q8N9R0 145 aa7.47□□□□□ -1.21
POLR2A-209ENST00000617998 SVIPQ8NHG7 77 aa7.47□□□□□ -1.21
POLR2A-209ENST00000617998 SPTSSBQ8NFR3 76 aa7.47□□□□□ -1.21
POLR2A-209ENST00000617998 TNP2Q05952 138 aa7.47□□□□□ -1.21
POLR2A-209ENST00000617998 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.47□□□□□ -1.21
POLR2A-209ENST00000617998 CSDC2Q9Y534 153 aaKnown RBP7.47□□□□□ -1.21
POLR2A-209ENST00000617998 WFDC13Q8IUB5 93 aa7.46□□□□□ -1.21
POLR2A-209ENST00000617998 M0R2T5 61 aa7.46□□□□□ -1.22
POLR2A-209ENST00000617998 K7ERS5 55 aa7.45□□□□□ -1.22
POLR2A-209ENST00000617998 PCSK5Q92824 1860 aa7.45□□□□□ -1.22
POLR2A-209ENST00000617998 C9orf118A6NHY6 69 aa7.45□□□□□ -1.22
POLR2A-209ENST00000617998 LINC01561Q8N1V8 128 aa7.45□□□□□ -1.22
POLR2A-209ENST00000617998 SMIM20Q8N5G0 67 aa7.44□□□□□ -1.22
POLR2A-209ENST00000617998 SPAG11AQ6PDA7 123 aa7.44□□□□□ -1.22
POLR2A-209ENST00000617998 LINC00167Q96N53 147 aa7.44□□□□□ -1.22
POLR2A-209ENST00000617998 TTTY13Q9BZ97 58 aa7.44□□□□□ -1.22
POLR2A-209ENST00000617998 PPDPFLQ8WWR9 84 aa7.44□□□□□ -1.22
POLR2A-209ENST00000617998 SERP1Q9Y6X1 66 aa7.42□□□□□ -1.22
POLR2A-209ENST00000617998 IGKV3D-7A0A0C4DH55 119 aa7.42□□□□□ -1.22
POLR2A-209ENST00000617998 NDUFV3P56181 108 aaKnown RBP7.42□□□□□ -1.22
POLR2A-209ENST00000617998 ACYP1P07311 99 aa7.42□□□□□ -1.22
POLR2A-209ENST00000617998 SCXQ7RTU7 201 aa7.42□□□□□ -1.22
POLR2A-209ENST00000617998 ZNF575Q86XF7 245 aa7.41□□□□□ -1.22
POLR2A-209ENST00000617998 Q9UF83 564 aa7.41□□□□□ -1.22
POLR2A-209ENST00000617998 BCE1O60756 84 aa7.41□□□□□ -1.22
POLR2A-209ENST00000617998 A0A1W2PPM0 123 aa7.41□□□□□ -1.22
POLR2A-209ENST00000617998 SMIM1B2RUZ4 78 aa7.41□□□□□ -1.22
POLR2A-209ENST00000617998 K7EP34 96 aa7.4□□□□□ -1.22
POLR2A-209ENST00000617998 TIMM17BO60830 172 aa7.4□□□□□ -1.22
POLR2A-209ENST00000617998 PRR3P79522 188 aaKnown RBP7.4□□□□□ -1.22
POLR2A-209ENST00000617998 Q8NBF4 154 aa7.4□□□□□ -1.22
POLR2A-209ENST00000617998 FAM30AQ9NZY2 134 aa7.4□□□□□ -1.23
POLR2A-209ENST00000617998 F8W1H4 67 aa7.39□□□□□ -1.23
POLR2A-209ENST00000617998 STAB1Q9NY15 2570 aa7.39□□□□□ -1.23
POLR2A-209ENST00000617998 Q8N3U1 123 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms