RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 RIGQ13278 110 aa2.87□□□□□ -1.95
CUL3-216ENST00000617432 PEA15Q15121 130 aa2.87□□□□□ -1.95
CUL3-216ENST00000617432 FAM104BQ5XKR9 115 aa2.87□□□□□ -1.95
CUL3-216ENST00000617432 OR5A1Q8NGJ0 315 aa2.87□□□□□ -1.95
CUL3-216ENST00000617432 SPACA4Q8TDM5 124 aa2.87□□□□□ -1.95
CUL3-216ENST00000617432 MRAP2Q96G30 205 aa2.87□□□□□ -1.95
CUL3-216ENST00000617432 CDC42SE2Q9NRR3 84 aa2.87□□□□□ -1.95
CUL3-216ENST00000617432 NAT8BQ9UHF3 227 aa2.87□□□□□ -1.95
CUL3-216ENST00000617432 UBE2D4Q9Y2X8 147 aa2.87□□□□□ -1.95
CUL3-216ENST00000617432 IGHV3-64A0A075B6Q5 118 aa2.86□□□□□ -1.95
CUL3-216ENST00000617432 GVQW2A0A096LPI5 108 aaPredicted RBP2.86□□□□□ -1.95
CUL3-216ENST00000617432 C7orf77A4D0Y5 90 aa2.86□□□□□ -1.95
CUL3-216ENST00000617432 CIRBPQ14011 172 aaKnown RBP2.86□□□□□ -1.95
CUL3-216ENST00000617432 TAL2Q16559 108 aa2.86□□□□□ -1.95
CUL3-216ENST00000617432 TRAV13-1A0A0B4J241 112 aa2.85□□□□□ -1.95
CUL3-216ENST00000617432 A0A0J9YXV3 536 aa2.85□□□□□ -1.95
CUL3-216ENST00000617432 H7C423 109 aa2.85□□□□□ -1.95
CUL3-216ENST00000617432 PHOX2AO14813 284 aa2.85□□□□□ -1.95
CUL3-216ENST00000617432 SNAPINO95295 136 aa2.85□□□□□ -1.95
CUL3-216ENST00000617432 ZNF25P17030 456 aaPredicted RBP2.85□□□□□ -1.95
CUL3-216ENST00000617432 FCER1GP30273 86 aa2.85□□□□□ -1.95
CUL3-216ENST00000617432 HBBP68871 147 aa2.85□□□□□ -1.95
CUL3-216ENST00000617432 Q6ZRU5 148 aa2.85□□□□□ -1.95
CUL3-216ENST00000617432 C5orf38Q86SI9 138 aa2.85□□□□□ -1.95
CUL3-216ENST00000617432 MRPL52Q86TS9 123 aaKnown RBP2.85□□□□□ -1.95
CUL3-216ENST00000617432 LINC01561Q8N1V8 128 aa2.85□□□□□ -1.95
CUL3-216ENST00000617432 ZNF664Q8N3J9 261 aa2.85□□□□□ -1.95
CUL3-216ENST00000617432 SMIM2Q9BVW6 85 aa2.85□□□□□ -1.95
CUL3-216ENST00000617432 DMBT1Q9UGM3 2413 aaPredicted RBP2.85□□□□□ -1.95
CUL3-216ENST00000617432 IGLV4-69A0A075B6H9 119 aa2.85□□□□□ -1.95
CUL3-216ENST00000617432 A0A087WZ39 114 aa2.85□□□□□ -1.95
CUL3-216ENST00000617432 LOC389332A0A1B0GUA5 103 aa2.85□□□□□ -1.95
CUL3-216ENST00000617432 A0A1B0GV72 72 aa2.85□□□□□ -1.95
CUL3-216ENST00000617432 MT1HL1P0DM35 61 aa2.85□□□□□ -1.95
CUL3-216ENST00000617432 S100A1P23297 94 aa2.85□□□□□ -1.95
CUL3-216ENST00000617432 CKS2P33552 79 aa2.85□□□□□ -1.95
CUL3-216ENST00000617432 Q6ZVQ6 151 aa2.85□□□□□ -1.95
CUL3-216ENST00000617432 TMEM101Q96IK0 257 aa2.85□□□□□ -1.95
CUL3-216ENST00000617432 BTF3L4Q96K17 158 aa2.85□□□□□ -1.95
CUL3-216ENST00000617432 TRBV24-1A0A075B6N3 115 aa2.84□□□□□ -1.96
CUL3-216ENST00000617432 IGHV1-58A0A0C4DH39 117 aa2.84□□□□□ -1.96
CUL3-216ENST00000617432 A0A1W2PNN7 141 aa2.84□□□□□ -1.96
CUL3-216ENST00000617432 SS18Q15532 418 aa2.84□□□□□ -1.96
CUL3-216ENST00000617432 KIAA1644Q3SXP7 199 aa2.84□□□□□ -1.96
CUL3-216ENST00000617432 CLLU1Q5K131 121 aa2.84□□□□□ -1.96
CUL3-216ENST00000617432 KRTAP11-1Q8IUC1 163 aa2.84□□□□□ -1.96
CUL3-216ENST00000617432 STPG4Q8N801 248 aa2.84□□□□□ -1.96
CUL3-216ENST00000617432 CARD19Q96LW7 228 aa2.84□□□□□ -1.96
CUL3-216ENST00000617432 PRELID3AQ96N28 172 aa2.84□□□□□ -1.96
CUL3-216ENST00000617432 SPANXB1Q9NS25 103 aaPredicted RBP2.84□□□□□ -1.96
CUL3-216ENST00000617432 PLAC8Q9NZF1 115 aa2.84□□□□□ -1.96
CUL3-216ENST00000617432 IGLV4-3A0A075B6K6 122 aa2.83□□□□□ -1.96
CUL3-216ENST00000617432 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.83□□□□□ -1.96
CUL3-216ENST00000617432 FAM168BA1KXE4 195 aa2.83□□□□□ -1.96
CUL3-216ENST00000617432 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.83□□□□□ -1.96
CUL3-216ENST00000617432 PRR3P79522 188 aaKnown RBP2.83□□□□□ -1.96
CUL3-216ENST00000617432 SPAG11BQ08648 103 aa2.83□□□□□ -1.96
CUL3-216ENST00000617432 SYCNQ0VAF6 134 aa2.83□□□□□ -1.96
CUL3-216ENST00000617432 TMEM136Q6ZRR5 245 aa2.83□□□□□ -1.96
CUL3-216ENST00000617432 LINC00173Q6ZV60 143 aa2.83□□□□□ -1.96
CUL3-216ENST00000617432 ORMDL3Q8N138 153 aa2.83□□□□□ -1.96
CUL3-216ENST00000617432 DPH3Q96FX2 82 aa2.83□□□□□ -1.96
CUL3-216ENST00000617432 IMMP2LQ96T52 175 aa2.83□□□□□ -1.96
CUL3-216ENST00000617432 KIR2DL4Q99706 377 aa2.83□□□□□ -1.96
CUL3-216ENST00000617432 C20orf78Q9BR46 151 aa2.83□□□□□ -1.96
CUL3-216ENST00000617432 SMDT1Q9H4I9 107 aa2.83□□□□□ -1.96
CUL3-216ENST00000617432 LINC00862A6NCI5 91 aa2.82□□□□□ -1.96
CUL3-216ENST00000617432 F8W036 122 aa2.82□□□□□ -1.96
CUL3-216ENST00000617432 COX7A2LO14548 114 aa2.82□□□□□ -1.96
CUL3-216ENST00000617432 RPL32P62910 135 aaKnown RBP2.82□□□□□ -1.96
CUL3-216ENST00000617432 PHF5AQ7RTV0 110 aaKnown RBP2.82□□□□□ -1.96
CUL3-216ENST00000617432 ORAOV1Q8WV07 137 aa2.82□□□□□ -1.96
CUL3-216ENST00000617432 CAMK2N2Q96S95 79 aa2.82□□□□□ -1.96
CUL3-216ENST00000617432 TIMM21Q9BVV7 248 aa2.82□□□□□ -1.96
CUL3-216ENST00000617432 RPS10P5Q9NQ39 176 aa2.82□□□□□ -1.96
CUL3-216ENST00000617432 C6orf48Q9UBA6 75 aa2.82□□□□□ -1.96
CUL3-216ENST00000617432 IGHV3OR16-9A0A0B4J2B5 98 aa2.81□□□□□ -1.96
CUL3-216ENST00000617432 TMEM218A2RU14 115 aa2.81□□□□□ -1.96
CUL3-216ENST00000617432 KRTAP16-1A8MUX0 517 aa2.81□□□□□ -1.96
CUL3-216ENST00000617432 C1orf196B1AJZ1 125 aa2.81□□□□□ -1.96
CUL3-216ENST00000617432 PPP1R17O96001 155 aa2.81□□□□□ -1.96
CUL3-216ENST00000617432 IFI27P40305 119 aaPredicted RBP2.81□□□□□ -1.96
CUL3-216ENST00000617432 MRPS36P82909 103 aaKnown RBP2.81□□□□□ -1.96
CUL3-216ENST00000617432 RPL18AQ02543 176 aaKnown RBP2.81□□□□□ -1.96
CUL3-216ENST00000617432 KIAA0087Q14695 138 aa2.81□□□□□ -1.96
CUL3-216ENST00000617432 C9orf116Q5BN46 136 aaPredicted RBP2.81□□□□□ -1.96
CUL3-216ENST00000617432 LINC00242Q5T6M2 205 aa2.81□□□□□ -1.96
CUL3-216ENST00000617432 C2orf82Q6UX34 121 aa2.81□□□□□ -1.96
CUL3-216ENST00000617432 UNQ6190/PRO20217Q6UXQ8 127 aa2.81□□□□□ -1.96
CUL3-216ENST00000617432 ATP5L2Q7Z4Y8 100 aa2.81□□□□□ -1.96
CUL3-216ENST00000617432 COMMD7Q86VX2 200 aa2.81□□□□□ -1.96
CUL3-216ENST00000617432 MAP1LC3AQ9H492 121 aa2.81□□□□□ -1.96
CUL3-216ENST00000617432 SPANXA1Q9NS26 97 aa2.81□□□□□ -1.96
CUL3-216ENST00000617432 HMCN2Q8NDA2 5059 aa2.81□□□□□ -1.96
CUL3-216ENST00000617432 SMIM1B2RUZ4 78 aa2.8□□□□□ -1.96
CUL3-216ENST00000617432 APOMO95445 188 aa2.8□□□□□ -1.96
CUL3-216ENST00000617432 OXTP01178 125 aa2.8□□□□□ -1.96
CUL3-216ENST00000617432 PPBPP02775 128 aa2.8□□□□□ -1.96
CUL3-216ENST00000617432 MT-ND4LP03901 98 aa2.8□□□□□ -1.96
CUL3-216ENST00000617432 S100A8P05109 93 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms