RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 Q6JHZ5 121 aa9.52□□□□□ -0.89
PCDHA11-202ENST00000616325 CCL18P55774 89 aa9.52□□□□□ -0.89
PCDHA11-202ENST00000616325 TMEM89A2RUT3 159 aa9.51□□□□□ -0.89
PCDHA11-202ENST00000616325 HAMPP81172 84 aa9.51□□□□□ -0.89
PCDHA11-202ENST00000616325 COX7B2Q8TF08 81 aa9.51□□□□□ -0.89
PCDHA11-202ENST00000616325 SNURFQ9Y675 71 aa9.51□□□□□ -0.89
PCDHA11-202ENST00000616325 ORMDL1Q9P0S3 153 aa9.5□□□□□ -0.89
PCDHA11-202ENST00000616325 WFDC11Q8NEX6 87 aa9.5□□□□□ -0.89
PCDHA11-202ENST00000616325 IGLV5-45A0A087WSX0 123 aa9.49□□□□□ -0.89
PCDHA11-202ENST00000616325 DEFB130BP0DP73 79 aa9.49□□□□□ -0.89
PCDHA11-202ENST00000616325 DEFB130AP0DP74 79 aa9.49□□□□□ -0.89
PCDHA11-202ENST00000616325 C6orf226Q5I0X4 101 aa9.49□□□□□ -0.89
PCDHA11-202ENST00000616325 C11orf72Q8NBR9 251 aa9.49□□□□□ -0.89
PCDHA11-202ENST00000616325 UPK3BQ9BT76 320 aa9.49□□□□□ -0.89
PCDHA11-202ENST00000616325 USP24Q9UPU5 2620 aa9.49□□□□□ -0.89
PCDHA11-202ENST00000616325 NTM-AS1Q6ZSK4 140 aa9.49□□□□□ -0.89
PCDHA11-202ENST00000616325 TRGV4A0A0C4DH28 118 aa9.49□□□□□ -0.89
PCDHA11-202ENST00000616325 H0YGX0 51 aa9.49□□□□□ -0.89
PCDHA11-202ENST00000616325 DEFB114Q30KQ6 69 aa9.48□□□□□ -0.89
PCDHA11-202ENST00000616325 ODF3L2Q3SX64 289 aa9.48□□□□□ -0.89
PCDHA11-202ENST00000616325 Q5XG85 94 aa9.48□□□□□ -0.89
PCDHA11-202ENST00000616325 OVOL2Q9BRP0 275 aa9.48□□□□□ -0.89
PCDHA11-202ENST00000616325 PRORYQ9H606 182 aa9.48□□□□□ -0.89
PCDHA11-202ENST00000616325 CDC42SE2Q9NRR3 84 aa9.48□□□□□ -0.89
PCDHA11-202ENST00000616325 Q6YL49 198 aa9.47□□□□□ -0.89
PCDHA11-202ENST00000616325 PF4P02776 101 aa9.46□□□□□ -0.89
PCDHA11-202ENST00000616325 C1orf158Q8N1D5 194 aa9.46□□□□□ -0.89
PCDHA11-202ENST00000616325 FAM236DA0A1B0GTK5 79 aa9.46□□□□□ -0.9
PCDHA11-202ENST00000616325 K7EQD1 137 aa9.46□□□□□ -0.9
PCDHA11-202ENST00000616325 FAM236CP0DP71 79 aa9.46□□□□□ -0.9
PCDHA11-202ENST00000616325 UBL5Q9BZL1 73 aa9.46□□□□□ -0.9
PCDHA11-202ENST00000616325 ITPR2Q14571 2701 aa9.45□□□□□ -0.9
PCDHA11-202ENST00000616325 ESM1Q9NQ30 184 aa9.45□□□□□ -0.9
PCDHA11-202ENST00000616325 A0A0U1RQV1 116 aa9.45□□□□□ -0.9
PCDHA11-202ENST00000616325 NBPF19A0A087WUL8 3843 aa9.45□□□□□ -0.9
PCDHA11-202ENST00000616325 XCL1P47992 114 aa9.44□□□□□ -0.9
PCDHA11-202ENST00000616325 IGHV4-31P0DP07 118 aa9.44□□□□□ -0.9
PCDHA11-202ENST00000616325 LINC00336Q6ZUF6 198 aa9.44□□□□□ -0.9
PCDHA11-202ENST00000616325 LAMTOR3Q9UHA4 124 aa9.44□□□□□ -0.9
PCDHA11-202ENST00000616325 CCKP06307 115 aa9.44□□□□□ -0.9
PCDHA11-202ENST00000616325 RBM3P98179 157 aaKnown RBP9.43□□□□□ -0.9
PCDHA11-202ENST00000616325 SCXQ7RTU7 201 aa9.43□□□□□ -0.9
PCDHA11-202ENST00000616325 IGLV4-60A0A075B6I1 120 aa9.42□□□□□ -0.9
PCDHA11-202ENST00000616325 FASNP49327 2511 aaKnown RBP9.42□□□□□ -0.9
PCDHA11-202ENST00000616325 S100A7L2Q5SY68 101 aa9.42□□□□□ -0.9
PCDHA11-202ENST00000616325 A8MTW9 85 aa9.41□□□□□ -0.9
PCDHA11-202ENST00000616325 CCL24O00175 119 aa9.41□□□□□ -0.9
PCDHA11-202ENST00000616325 RMI2Q96E14 147 aa9.41□□□□□ -0.9
PCDHA11-202ENST00000616325 IGLV10-54A0A075B6I4 117 aa9.4□□□□□ -0.9
PCDHA11-202ENST00000616325 DEFB4AO15263 64 aa9.4□□□□□ -0.9
PCDHA11-202ENST00000616325 WIPF1O43516 503 aa9.4□□□□□ -0.9
PCDHA11-202ENST00000616325 NDUFC2O95298 119 aa9.4□□□□□ -0.9
PCDHA11-202ENST00000616325 TMEM86BQ8N661 226 aa9.4□□□□□ -0.9
PCDHA11-202ENST00000616325 HECTD1Q9ULT8 2610 aa9.4□□□□□ -0.9
PCDHA11-202ENST00000616325 DSCR9P59020 149 aa9.4□□□□□ -0.9
PCDHA11-202ENST00000616325 C4orf3Q8WVX3 66 aa9.4□□□□□ -0.9
PCDHA11-202ENST00000616325 CR1P17927 2039 aa9.39□□□□□ -0.91
PCDHA11-202ENST00000616325 BRK1Q8WUW1 75 aa9.39□□□□□ -0.91
PCDHA11-202ENST00000616325 F8WEM9 126 aa9.38□□□□□ -0.91
PCDHA11-202ENST00000616325 MPLKIPQ8TAP9 179 aa9.37□□□□□ -0.91
PCDHA11-202ENST00000616325 VWFP04275 2813 aa9.37□□□□□ -0.91
PCDHA11-202ENST00000616325 TRAV10A0A0B4J240 114 aa9.37□□□□□ -0.91
PCDHA11-202ENST00000616325 J3QLI3 93 aa9.37□□□□□ -0.91
PCDHA11-202ENST00000616325 JMJD7-PLA2G4BH0Y9G9 81 aa9.37□□□□□ -0.91
PCDHA11-202ENST00000616325 LINC00474Q9P2X8 69 aa9.37□□□□□ -0.91
PCDHA11-202ENST00000616325 UBR5O95071 2799 aaPredicted RBP9.36□□□□□ -0.91
PCDHA11-202ENST00000616325 ATRQ13535 2644 aa9.36□□□□□ -0.91
PCDHA11-202ENST00000616325 SS18Q15532 418 aa9.36□□□□□ -0.91
PCDHA11-202ENST00000616325 TRBV6-4A0A1B0GX49 114 aa9.35□□□□□ -0.91
PCDHA11-202ENST00000616325 TMEM256-PLSCR3K7ERE1 68 aa9.35□□□□□ -0.91
PCDHA11-202ENST00000616325 C6orf99Q4VX62 202 aa9.35□□□□□ -0.91
PCDHA11-202ENST00000616325 IBA57-AS1B1ANH7 110 aa9.35□□□□□ -0.91
PCDHA11-202ENST00000616325 C9orf116Q5BN46 136 aaPredicted RBP9.35□□□□□ -0.91
PCDHA11-202ENST00000616325 Q8N814 137 aa9.35□□□□□ -0.91
PCDHA11-202ENST00000616325 DNAJC9-AS1A6NH13 148 aa9.34□□□□□ -0.91
PCDHA11-202ENST00000616325 M0R2N4 97 aa9.34□□□□□ -0.91
PCDHA11-202ENST00000616325 MRAPQ8TCY5 172 aa9.34□□□□□ -0.91
PCDHA11-202ENST00000616325 HTN3P15516 51 aa9.34□□□□□ -0.91
PCDHA11-202ENST00000616325 OBSCN-AS1Q96MR7 158 aa9.34□□□□□ -0.91
PCDHA11-202ENST00000616325 A0A096LNT2 108 aa9.33□□□□□ -0.92
PCDHA11-202ENST00000616325 H7BZZ5 65 aa9.33□□□□□ -0.92
PCDHA11-202ENST00000616325 HELZ2Q9BYK8 2649 aaKnown RBP9.33□□□□□ -0.92
PCDHA11-202ENST00000616325 UNC79Q9P2D8 2635 aa9.32□□□□□ -0.92
PCDHA11-202ENST00000616325 PRO0628Q9UI54 55 aa9.32□□□□□ -0.92
PCDHA11-202ENST00000616325 SERP1Q9Y6X1 66 aa9.32□□□□□ -0.92
PCDHA11-202ENST00000616325 BBC3Q96PG8 261 aaPredicted RBP9.32□□□□□ -0.92
PCDHA11-202ENST00000616325 IGHV3OR16-9A0A0B4J2B5 98 aa9.31□□□□□ -0.92
PCDHA11-202ENST00000616325 TRBV10-1A0A0K0K1A3 114 aa9.31□□□□□ -0.92
PCDHA11-202ENST00000616325 GYPEP15421 78 aa9.31□□□□□ -0.92
PCDHA11-202ENST00000616325 DEFB113Q30KQ7 82 aa9.31□□□□□ -0.92
PCDHA11-202ENST00000616325 Q8N3U1 123 aa9.31□□□□□ -0.92
PCDHA11-202ENST00000616325 DAD1P61803 113 aa9.31□□□□□ -0.92
PCDHA11-202ENST00000616325 FLNBO75369 2602 aaKnown RBP9.3□□□□□ -0.92
PCDHA11-202ENST00000616325 TEP1Q99973 2627 aaKnown RBP9.3□□□□□ -0.92
PCDHA11-202ENST00000616325 TRBV6-8A0A0A6YYG3 113 aa9.3□□□□□ -0.92
PCDHA11-202ENST00000616325 TRAV7A0A075B6U4 112 aa9.29□□□□□ -0.92
PCDHA11-202ENST00000616325 LINC00269Q8N2A0 174 aa9.29□□□□□ -0.92
PCDHA11-202ENST00000616325 LINC01547P58512 204 aaPredicted RBP9.29□□□□□ -0.92
PCDHA11-202ENST00000616325 ATP5EP2Q5VTU8 51 aa9.29□□□□□ -0.92
PCDHA11-202ENST00000616325 NDUFC2-KCTD14E9PQ53 114 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms