RNA–Protein interactions for RNA: ENST00000616010.4

CCND3-223, Transcript of cyclin D3, humanhuman

TSL 5 BASIC

Gene CCND3, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-223ENST00000616010 ZNF561-AS1K7EIQ3 104 aa15.48■□□□□ 0.07
CCND3-223ENST00000616010 LECT2O14960 151 aa15.48■□□□□ 0.07
CCND3-223ENST00000616010 CXCL5P42830 114 aa15.48■□□□□ 0.07
CCND3-223ENST00000616010 HERV-K104P63124 156 aa15.47■□□□□ 0.07
CCND3-223ENST00000616010 HIGD1BQ9P298 99 aa15.47■□□□□ 0.07
CCND3-223ENST00000616010 GVQW2A0A096LPI5 108 aaPredicted RBP15.46■□□□□ 0.07
CCND3-223ENST00000616010 CTAG1AP78358 180 aa15.46■□□□□ 0.07
CCND3-223ENST00000616010 SFTA2Q6UW10 78 aa15.46■□□□□ 0.07
CCND3-223ENST00000616010 Q6ZRN7 208 aaPredicted RBP15.46■□□□□ 0.07
CCND3-223ENST00000616010 NTN5Q8WTR8 489 aaPredicted RBP15.44■□□□□ 0.06
CCND3-223ENST00000616010 MEIG1Q5JSS6 88 aa15.44■□□□□ 0.06
CCND3-223ENST00000616010 WFDC2Q14508 124 aa15.43■□□□□ 0.06
CCND3-223ENST00000616010 UNQ6190/PRO20217Q6UXQ8 127 aa15.42■□□□□ 0.06
CCND3-223ENST00000616010 C10orf25Q5T742 122 aa15.41■□□□□ 0.06
CCND3-223ENST00000616010 CAMK2N2Q96S95 79 aa15.41■□□□□ 0.06
CCND3-223ENST00000616010 LITAFQ99732 161 aa15.41■□□□□ 0.06
CCND3-223ENST00000616010 A0A0U1RRA0 63 aa15.41■□□□□ 0.06
CCND3-223ENST00000616010 LINC00587B1AMM8 73 aa15.41■□□□□ 0.06
CCND3-223ENST00000616010 TMEM238C9JI98 176 aa15.41■□□□□ 0.06
CCND3-223ENST00000616010 DNAH2Q9P225 4427 aa15.4■□□□□ 0.06
CCND3-223ENST00000616010 C2orf48Q96LS8 159 aa15.39■□□□□ 0.05
CCND3-223ENST00000616010 SMIM13P0DJ93 91 aa15.39■□□□□ 0.05
CCND3-223ENST00000616010 HIST1H4GQ99525 98 aa15.39■□□□□ 0.05
CCND3-223ENST00000616010 SRSF9Q13242 221 aaKnown RBP eCLIP15.38■□□□□ 0.05
CCND3-223ENST00000616010 CIRBPQ14011 172 aaKnown RBP15.38■□□□□ 0.05
CCND3-223ENST00000616010 ADAMTSL4-AS1Q5T5F5 129 aa15.38■□□□□ 0.05
CCND3-223ENST00000616010 C1orf134Q5TEV5 83 aa15.38■□□□□ 0.05
CCND3-223ENST00000616010 ERG28Q9UKR5 140 aa15.38■□□□□ 0.05
CCND3-223ENST00000616010 TIMM17BO60830 172 aa15.38■□□□□ 0.05
CCND3-223ENST00000616010 HSD52Q0P140 79 aa15.38■□□□□ 0.05
CCND3-223ENST00000616010 DAND5Q8N907 189 aa15.38■□□□□ 0.05
CCND3-223ENST00000616010 SPANXB1Q9NS25 103 aaPredicted RBP15.38■□□□□ 0.05
CCND3-223ENST00000616010 HYDINQ4G0P3 5121 aa15.37■□□□□ 0.05
CCND3-223ENST00000616010 PFN2P35080 140 aa15.37■□□□□ 0.05
CCND3-223ENST00000616010 C9orf116Q5BN46 136 aaPredicted RBP15.37■□□□□ 0.05
CCND3-223ENST00000616010 Q6ZRU5 148 aa15.37■□□□□ 0.05
CCND3-223ENST00000616010 C6orf48Q9UBA6 75 aa15.36■□□□□ 0.05
CCND3-223ENST00000616010 LRCOL1A6NCL2 159 aa15.34■□□□□ 0.05
CCND3-223ENST00000616010 HINT1P49773 126 aaPredicted RBP15.34■□□□□ 0.05
CCND3-223ENST00000616010 LINC00158P58513 81 aa15.34■□□□□ 0.05
CCND3-223ENST00000616010 SACSQ9NZJ4 4579 aa15.34■□□□□ 0.05
CCND3-223ENST00000616010 SYCNQ0VAF6 134 aa15.34■□□□□ 0.05
CCND3-223ENST00000616010 F8WDY8 70 aa15.33■□□□□ 0.04
CCND3-223ENST00000616010 SPANXDQ9BXN6 97 aa15.33■□□□□ 0.04
CCND3-223ENST00000616010 SPANXCQ9NY87 97 aa15.33■□□□□ 0.04
CCND3-223ENST00000616010 TRBV30A0A0K0K1B3 111 aa15.33■□□□□ 0.04
CCND3-223ENST00000616010 SLPIP03973 132 aa15.33■□□□□ 0.04
CCND3-223ENST00000616010 GCSHP23434 173 aa15.33■□□□□ 0.04
CCND3-223ENST00000616010 NPC2P61916 151 aa15.33■□□□□ 0.04
CCND3-223ENST00000616010 TAL2Q16559 108 aa15.33■□□□□ 0.04
CCND3-223ENST00000616010 LCE6AA0A183 80 aa15.32■□□□□ 0.04
CCND3-223ENST00000616010 C14orf177Q52M58 125 aa15.32■□□□□ 0.04
CCND3-223ENST00000616010 CARD19Q96LW7 228 aa15.32■□□□□ 0.04
CCND3-223ENST00000616010 MIR7-3HGQ8N6C7 128 aa15.31■□□□□ 0.04
CCND3-223ENST00000616010 CEND1Q8N111 149 aa15.31■□□□□ 0.04
CCND3-223ENST00000616010 COX17Q14061 63 aa15.3■□□□□ 0.04
CCND3-223ENST00000616010 BATFQ16520 125 aa15.3■□□□□ 0.04
CCND3-223ENST00000616010 BVES-AS1Q5T3Y7 98 aa15.29■□□□□ 0.04
CCND3-223ENST00000616010 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.29■□□□□ 0.04
CCND3-223ENST00000616010 Q6ZVH6 145 aa15.29■□□□□ 0.04
CCND3-223ENST00000616010 M0R143 59 aa15.28■□□□□ 0.04
CCND3-223ENST00000616010 FXYD2P54710 66 aa15.27■□□□□ 0.04
CCND3-223ENST00000616010 MUSTN1Q8IVN3 82 aa15.27■□□□□ 0.04
CCND3-223ENST00000616010 A0A087WTM6 91 aa15.27■□□□□ 0.03
CCND3-223ENST00000616010 SNHG12Q9BXW3 62 aa15.26■□□□□ 0.03
CCND3-223ENST00000616010 EREGO14944 169 aa15.26■□□□□ 0.03
CCND3-223ENST00000616010 EIF4EBP3O60516 100 aaPredicted RBP15.26■□□□□ 0.03
CCND3-223ENST00000616010 LINC00308Q8TCZ7 52 aa15.26■□□□□ 0.03
CCND3-223ENST00000616010 FRAS1Q86XX4 4008 aa15.25■□□□□ 0.03
CCND3-223ENST00000616010 PTTG1IPP53801 180 aa15.24■□□□□ 0.03
CCND3-223ENST00000616010 SOSTDC1Q6X4U4 206 aa15.24■□□□□ 0.03
CCND3-223ENST00000616010 Q8N814 137 aa15.24■□□□□ 0.03
CCND3-223ENST00000616010 DNAH17Q9UFH2 4485 aa15.24■□□□□ 0.03
CCND3-223ENST00000616010 CNBPP62633 177 aaKnown RBP15.24■□□□□ 0.03
CCND3-223ENST00000616010 IFITM1P13164 125 aa15.23■□□□□ 0.03
CCND3-223ENST00000616010 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.22■□□□□ 0.03
CCND3-223ENST00000616010 RTL8CO15255 209 aa15.22■□□□□ 0.03
CCND3-223ENST00000616010 RNF151Q2KHN1 245 aa15.22■□□□□ 0.03
CCND3-223ENST00000616010 RPL24P83731 157 aaKnown RBP15.21■□□□□ 0.03
CCND3-223ENST00000616010 NDUFC2-KCTD14E9PQ53 114 aa15.21■□□□□ 0.02
CCND3-223ENST00000616010 SND1-IT1Q9HBX3 110 aa15.21■□□□□ 0.02
CCND3-223ENST00000616010 COPS9Q8WXC6 57 aa15.2■□□□□ 0.02
CCND3-223ENST00000616010 A4D1N5 150 aa15.19■□□□□ 0.02
CCND3-223ENST00000616010 TNP2Q05952 138 aa15.19■□□□□ 0.02
CCND3-223ENST00000616010 TMEM238LA0A1B0GVL6 79 aa15.19■□□□□ 0.02
CCND3-223ENST00000616010 A6NJY4 79 aa15.19■□□□□ 0.02
CCND3-223ENST00000616010 RPL18AQ02543 176 aaKnown RBP15.18■□□□□ 0.02
CCND3-223ENST00000616010 Q6ZRP5 223 aa15.18■□□□□ 0.02
CCND3-223ENST00000616010 NHP2Q9NX24 153 aaKnown RBP15.17■□□□□ 0.02
CCND3-223ENST00000616010 GAGE2EQ4V326 116 aa15.17■□□□□ 0.02
CCND3-223ENST00000616010 XAGE1AQ9HD64 81 aa15.17■□□□□ 0.02
CCND3-223ENST00000616010 GAGE2DQ9UEU5 116 aa15.17■□□□□ 0.02
CCND3-223ENST00000616010 TLX1NBP0CAT3 122 aa15.16■□□□□ 0.02
CCND3-223ENST00000616010 KMT2CQ8NEZ4 4911 aaKnown RBP15.15■□□□□ 0.02
CCND3-223ENST00000616010 A6NDN8 102 aa15.14■□□□□ 0.01
CCND3-223ENST00000616010 PPDPFQ9H3Y8 114 aa15.14■□□□□ 0.01
CCND3-223ENST00000616010 K7ERJ3 54 aa15.14■□□□□ 0.01
CCND3-223ENST00000616010 LOC107984156A0A0G2JMH3 177 aa15.12■□□□□ 0.01
CCND3-223ENST00000616010 LOC107984640A0A0U1RRK4 108 aa15.12■□□□□ 0.01
CCND3-223ENST00000616010 ARL17AQ8IVW1 177 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms