RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 LINC00208Q96KT6 92 aa1.95□□□□□ -2.1
CBWD3-209ENST00000614377 IGKV1-17P01599 117 aa1.95□□□□□ -2.1
CBWD3-209ENST00000614377 IGKV3-15P01624 115 aa1.95□□□□□ -2.1
CBWD3-209ENST00000614377 IGHV3-53P01767 116 aa1.95□□□□□ -2.1
CBWD3-209ENST00000614377 DNAH10OSP0CZ25 163 aa1.95□□□□□ -2.1
CBWD3-209ENST00000614377 POLR2KP53803 58 aaKnown RBP1.95□□□□□ -2.1
CBWD3-209ENST00000614377 LINC01006Q8NI28 216 aa1.95□□□□□ -2.1
CBWD3-209ENST00000614377 UNC13CQ8NB66 2214 aa1.95□□□□□ -2.1
CBWD3-209ENST00000614377 MIR22HGQ0VDD5 57 aa1.95□□□□□ -2.1
CBWD3-209ENST00000614377 HIGD2BQ4VC39 106 aa1.95□□□□□ -2.1
CBWD3-209ENST00000614377 LINC00612Q8N6U2 182 aa1.95□□□□□ -2.1
CBWD3-209ENST00000614377 TMEM105Q8N8V8 129 aa1.95□□□□□ -2.1
CBWD3-209ENST00000614377 ZNRD1Q9P1U0 126 aa1.95□□□□□ -2.1
CBWD3-209ENST00000614377 LENEPQ9Y5L5 61 aa1.95□□□□□ -2.1
CBWD3-209ENST00000614377 IGLV4-60A0A075B6I1 120 aa1.94□□□□□ -2.1
CBWD3-209ENST00000614377 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.94□□□□□ -2.1
CBWD3-209ENST00000614377 ZGRF1Q86YA3 2104 aa1.94□□□□□ -2.1
CBWD3-209ENST00000614377 CIRBP-AS1Q8TBR5 109 aa1.94□□□□□ -2.1
CBWD3-209ENST00000614377 CR1P17927 2039 aa1.94□□□□□ -2.1
CBWD3-209ENST00000614377 CACNA1IQ9P0X4 2223 aa1.94□□□□□ -2.1
CBWD3-209ENST00000614377 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.94□□□□□ -2.1
CBWD3-209ENST00000614377 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.94□□□□□ -2.1
CBWD3-209ENST00000614377 LINC00959A0A1B0GUT2 108 aa1.94□□□□□ -2.1
CBWD3-209ENST00000614377 LINC00483Q53H64 154 aa1.94□□□□□ -2.1
CBWD3-209ENST00000614377 SPINK14Q6IE38 97 aa1.94□□□□□ -2.1
CBWD3-209ENST00000614377 KRTAP26-1Q6PEX3 210 aa1.94□□□□□ -2.1
CBWD3-209ENST00000614377 COX7B2Q8TF08 81 aa1.94□□□□□ -2.1
CBWD3-209ENST00000614377 DEFB126Q9BYW3 111 aa1.94□□□□□ -2.1
CBWD3-209ENST00000614377 USF3Q68DE3 2245 aa1.94□□□□□ -2.1
CBWD3-209ENST00000614377 CACNA1DQ01668 2161 aa1.93□□□□□ -2.1
CBWD3-209ENST00000614377 IGKV2-28A0A075B6P5 120 aa1.93□□□□□ -2.1
CBWD3-209ENST00000614377 INSP01308 110 aa1.93□□□□□ -2.1
CBWD3-209ENST00000614377 IGKV2D-28P01615 120 aa1.93□□□□□ -2.1
CBWD3-209ENST00000614377 TLX1NBP0CAT3 122 aa1.93□□□□□ -2.1
CBWD3-209ENST00000614377 SMIM11BQ8TCY0 68 aa1.93□□□□□ -2.1
CBWD3-209ENST00000614377 ZNF462Q96JM2 2506 aa1.93□□□□□ -2.1
CBWD3-209ENST00000614377 ALMS1Q8TCU4 4167 aa1.93□□□□□ -2.1
CBWD3-209ENST00000614377 M0R2N4 97 aa1.93□□□□□ -2.1
CBWD3-209ENST00000614377 KCNQ1DNQ9H478 68 aa1.93□□□□□ -2.1
CBWD3-209ENST00000614377 ALPK2Q86TB3 2170 aa1.93□□□□□ -2.1
CBWD3-209ENST00000614377 CADP27708 2225 aa1.93□□□□□ -2.1
CBWD3-209ENST00000614377 HAMPP81172 84 aa1.92□□□□□ -2.1
CBWD3-209ENST00000614377 SPATA8Q6RVD6 105 aa1.92□□□□□ -2.1
CBWD3-209ENST00000614377 RPL39LQ96EH5 51 aaKnown RBP1.92□□□□□ -2.1
CBWD3-209ENST00000614377 C20orf166-AS1Q96NR2 134 aa1.92□□□□□ -2.1
CBWD3-209ENST00000614377 SPAG17Q6Q759 2223 aa1.92□□□□□ -2.1
CBWD3-209ENST00000614377 IGLV7-46A0A075B6I9 117 aa1.92□□□□□ -2.1
CBWD3-209ENST00000614377 H3BRN7 92 aa1.92□□□□□ -2.1
CBWD3-209ENST00000614377 LINC00315P59091 139 aa1.92□□□□□ -2.1
CBWD3-209ENST00000614377 KRTAP10-6P60371 365 aaPredicted RBP1.92□□□□□ -2.1
CBWD3-209ENST00000614377 RPL39P62891 51 aaKnown RBP1.92□□□□□ -2.1
CBWD3-209ENST00000614377 KRTAP25-1Q3LHN0 102 aa1.92□□□□□ -2.1
CBWD3-209ENST00000614377 SPRR4Q96PI1 79 aa1.92□□□□□ -2.1
CBWD3-209ENST00000614377 A8MUU9 505 aa1.92□□□□□ -2.1
CBWD3-209ENST00000614377 NDUFA4O00483 81 aa1.92□□□□□ -2.1
CBWD3-209ENST00000614377 Q8TAT8 98 aa1.92□□□□□ -2.1
CBWD3-209ENST00000614377 COL27A1Q8IZC6 1860 aaPredicted RBP1.91□□□□□ -2.1
CBWD3-209ENST00000614377 PROK1P58294 105 aa1.91□□□□□ -2.1
CBWD3-209ENST00000614377 SMIM29Q86T20 159 aa1.91□□□□□ -2.1
CBWD3-209ENST00000614377 C9orf163Q8N9P6 203 aa1.91□□□□□ -2.1
CBWD3-209ENST00000614377 KRTAP4-3Q9BYR4 195 aa1.91□□□□□ -2.1
CBWD3-209ENST00000614377 IGHV3-64A0A075B6Q5 118 aa1.91□□□□□ -2.1
CBWD3-209ENST00000614377 IGHV3-64DA0A0J9YX35 117 aa1.91□□□□□ -2.1
CBWD3-209ENST00000614377 ODF3BA8MYP8 253 aa1.91□□□□□ -2.1
CBWD3-209ENST00000614377 H3BQ85 93 aa1.91□□□□□ -2.1
CBWD3-209ENST00000614377 IGKV3-20P01619 116 aa1.91□□□□□ -2.1
CBWD3-209ENST00000614377 SPAG11BQ08648 103 aa1.91□□□□□ -2.1
CBWD3-209ENST00000614377 SPAG11AQ6PDA7 123 aa1.91□□□□□ -2.1
CBWD3-209ENST00000614377 MALRD1Q5VYJ5 2156 aa1.91□□□□□ -2.1
CBWD3-209ENST00000614377 PIEZO1Q92508 2521 aa1.91□□□□□ -2.1
CBWD3-209ENST00000614377 COL6A3P12111 3177 aa1.9□□□□□ -2.1
CBWD3-209ENST00000614377 TRGV2A0A075B6R0 118 aa1.9□□□□□ -2.1
CBWD3-209ENST00000614377 A0A096LNT2 108 aa1.9□□□□□ -2.1
CBWD3-209ENST00000614377 ETDCA0A1B0GVM5 59 aa1.9□□□□□ -2.1
CBWD3-209ENST00000614377 PANO1I0J062 215 aa1.9□□□□□ -2.1
CBWD3-209ENST00000614377 ZNF861PO60384 105 aa1.9□□□□□ -2.1
CBWD3-209ENST00000614377 C1orf137Q5JT78 98 aa1.9□□□□□ -2.1
CBWD3-209ENST00000614377 DMAC1Q96GE9 116 aa1.9□□□□□ -2.1
CBWD3-209ENST00000614377 WFDC10AQ9H1F0 79 aa1.9□□□□□ -2.1
CBWD3-209ENST00000614377 KIAA0100Q14667 2235 aaKnown RBP1.9□□□□□ -2.11
CBWD3-209ENST00000614377 H0Y9P7 68 aa1.9□□□□□ -2.11
CBWD3-209ENST00000614377 COA5Q86WW8 74 aa1.9□□□□□ -2.11
CBWD3-209ENST00000614377 TNCP24821 2201 aa1.9□□□□□ -2.11
CBWD3-209ENST00000614377 RP1P56715 2156 aa1.9□□□□□ -2.11
CBWD3-209ENST00000614377 DIDO1Q9BTC0 2240 aaKnown RBP1.9□□□□□ -2.11
CBWD3-209ENST00000614377 STATHP02808 62 aa1.89□□□□□ -2.11
CBWD3-209ENST00000614377 SDK2Q58EX2 2172 aa1.89□□□□□ -2.11
CBWD3-209ENST00000614377 GOLGB1Q14789 3259 aaKnown RBP1.89□□□□□ -2.11
CBWD3-209ENST00000614377 IGKV3D-11A0A0A0MRZ8 115 aa1.89□□□□□ -2.11
CBWD3-209ENST00000614377 LINC01565O15544 149 aa1.89□□□□□ -2.11
CBWD3-209ENST00000614377 ERHP84090 104 aaKnown RBP1.89□□□□□ -2.11
CBWD3-209ENST00000614377 LCE1AQ5T7P2 110 aa1.89□□□□□ -2.11
CBWD3-209ENST00000614377 ST20-AS1Q8NBB2 130 aa1.89□□□□□ -2.11
CBWD3-209ENST00000614377 C16orf74Q96GX8 76 aa1.89□□□□□ -2.11
CBWD3-209ENST00000614377 IGKV2-40A0A087WW87 121 aaPredicted RBP1.89□□□□□ -2.11
CBWD3-209ENST00000614377 IGKV2D-40P01614 121 aaPredicted RBP1.89□□□□□ -2.11
CBWD3-209ENST00000614377 WT1-ASQ06250 92 aa1.89□□□□□ -2.11
CBWD3-209ENST00000614377 ZFHX2Q9C0A1 2572 aaPredicted RBP1.88□□□□□ -2.11
CBWD3-209ENST00000614377 F5P12259 2224 aa1.88□□□□□ -2.11
CBWD3-209ENST00000614377 IGLV7-43P04211 117 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms